BAC Information

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BAC

Clone NameB6Ng01-320K10
Chromosome10 (Build37)4 (Build37)
Map Location 99,331,784 - 99,331,83583,222,940 - 83,224,032
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneAtp2b1, Wdr51b, Galnt4, Dusp6, LOC100042222, Gad1-ps, LOC100042232, LOC667502, Csl, LOC100042246
Downstream geneKitl, LOC100043208, LOC100043211, EG667532, LOC670007, LOC235966, LOC667556, LOC100043224, LOC100043227, LOC100043231, LOC100043235, LOC667580, LOC100043239, LOC100043242, LOC100043244, LOC667607, LOC100043247, EG213051, Tmtc3, 4930430F08Rik, 1700017N19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-320K10.bB6Ng01-320K10.g
ACCGA109967GA109968
length4231,093
definitionB6Ng01-320K10.b B6Ng01-320K10.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(99,331,784 - 99,331,835)(83,222,940 - 83,224,032)
sequence
tttactccattgaccacagcgtcagggaagaaatagagaaagaaattaat
atttttctagagctcaatgaaaatgaaggcacaacctacccaaacttatg
ggacacaataaaagcagtgttaagagaaaatctcatgctattaagtgcct
tcacaaaggaattggagatatttcatactggcaatttaaaagcgcacgtg
aaagctctagaacaaaaagaagcaaacacacccaagagaagtagatggag
gaaacaatcaaactcagagctgaaatcaataaatcaagaaacaaacagaa
caacacaatcaacaaaaccaagagctggttctttgagaaaatcaacaaga
tagattagccaaactaactaaaaggcagagagagagaggagagaggagag
aggagagagagagagagagagag
gaattcaaaatcctgcttggaaaaaacatcagctgtgggcagggcatggt
ggtgcctgcctttaatcctaggcactctaaaggatctggaggcaagagga
aggtggatctttgagttcaaagtcagagtgaatgccaggactccaagagc
tacatagggaaaccctgtcttgaaaaatcacaaacaaaacgaaactaaac
aaaaaaccccagagaacaaaacaaacaacaacaacaacaacagcagcagc
aacacaaacccccagtgacttcaaagaggattcaagaagcagatggttgt
gataagaaagcagtatggatgagaatactactggagaagagtttatcgaa
gtaattgagattgtgaaaaaaagtaagagatgaataatgaccgagtaaac
caacacaagcttaaggtattatttttactattcaatgaggtttttcattt
ccaatatttctgcccttttcctctcccacatctcaactttgagccagggc
tacagttgacttggtgcatacacaacgcctgagtttgccctatccacttg
taaccatcacgcagaagggagcatggtggtgtatacctgtaatctcagca
ctcaggatgagatcagataaaataaaagataaaatatcagaggctaaaca
caggtttgagggatccaataccctcttccggcctccacagccactgcatt
cacacgtggcacaggtgtacatgtaggcacaacgcccacacccatgcaat
aaaaataacggttaaaagttaagaaagagccatggatattgtatggaagt
ctgaaggggtcttatctgggggtgggagaggggaccagtgggaagggaat
gggaggacaagagaagccagtgggaggctggatatggtcagatgaaattt
cggtaaacccatcatttggcaaataagttgtatgttaataaaaagggccc
taaaggttgacctttgggttaatatttgcagtgactgctgagaaagagac
tgattgaaggtatgaatggagcttacacttgcacagtgctcatggttcct
aaacctatcacagaatgaggcttctcagtttgatagccaatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_99331784_99331835
seq2: B6Ng01-320K10.b_425_473 (reverse)

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  50
      ||||||||||||||||||||| ||||||| ||||||| ||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTC-CTCTCTC-CTCTCTC-CTCTCTCTCTCT  47

seq1  GC  52
      ||
seq2  GC  49

seq1: chr4_83222940_83224032
seq2: B6Ng01-320K10.g_65_1157

seq1  GAATTCAAAATCCTGCTTGGAAAAAACATCAGCTGTGGGCAGGGCATGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAATCCTGCTTGGAAAAAACATCAGCTGTGGGCAGGGCATGGT  50

seq1  GGTGCCTGCCTTTAATCCTAGGCACTCTAAAGGATCTGGAGGCAAGAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCCTGCCTTTAATCCTAGGCACTCTAAAGGATCTGGAGGCAAGAGGA  100

seq1  AGGTGGATCTTTGAGTTCAAAGTCAGAGTGAATGCCAGGACTCCAAGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGATCTTTGAGTTCAAAGTCAGAGTGAATGCCAGGACTCCAAGAGC  150

seq1  TACATAGGGAAACCCTGTCTTGAAAAATCACAAACAAAACGAAACTAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAGGGAAACCCTGTCTTGAAAAATCACAAACAAAACGAAACTAAAC  200

seq1  AAAAAACCCCAGAGAACAAAACAAACAACAACAACAACAACAGCAGCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACCCCAGAGAACAAAACAAACAACAACAACAACAACAGCAGCAGC  250

seq1  AACACAAACCCCCAGTGACTTCAAAGAGGATTCAAGAAGCAGATGGTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAAACCCCCAGTGACTTCAAAGAGGATTCAAGAAGCAGATGGTTGT  300

seq1  GATAAGAAAGCAGTATGGATGAGAATACTACTGGAGAAGAGTTTATCGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGAAAGCAGTATGGATGAGAATACTACTGGAGAAGAGTTTATCGAA  350

seq1  GTAATTGAGATTGTGAAAAAAAGTAAGAGATGAATAATGACCGAGTAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTGAGATTGTGAAAAAAAGTAAGAGATGAATAATGACCGAGTAAAC  400

seq1  CAACACAAGCTTAAGGTATTATTTTTACTATTCAATGAGGTTTTTCATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACAAGCTTAAGGTATTATTTTTACTATTCAATGAGGTTTTTCATTT  450

seq1  CCAATATTTCTGCCCTTTTCCTCTCCCACATCTCAACTTTGAGCCAGGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATATTTCTGCCCTTTTCCTCTCCCACATCTCAACTTTGAGCCAGGGC  500

seq1  TACAGTTGACTTGGTGCATACACAACGCCTGAGTTTGCCCTATCCACTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTTGACTTGGTGCATACACAACGCCTGAGTTTGCCCTATCCACTTG  550

seq1  TAACCATCACGCAGAAGGGAGCATGGTGGTGTATACCTGTAATCTCAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCATCACGCAGAAGGGAGCATGGTGGTGTATACCTGTAATCTCAGCA  600

seq1  CTCAGGATGAGATCAGATAAAATAAAAGATAAAATATCAGAGGCTAAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGATGAGATCAGATAAAATAAAAGATAAAATATCAGAGGCTAAACA  650

seq1  CAGGTTTGAGGGATCCAATACCCTCTTCCGGCCTCCACAGCCACTGCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTTGAGGGATCCAATACCCTCTTCCGGCCTCCACAGCCACTGCATT  700

seq1  CACACGTGGCACAGGTGTACATGTAGGCACAACGCCCACACCCATGCAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACGTGGCACAGGTGTACATGTAGGCACAACGCCCACACCCATGCAAT  750

seq1  AAAAATAACGGTTAAAAGTTAAGAAAGAGCCATGGATATTGTATGGAAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAACGGTTAAAAGTTAAGAAAGAGCCATGGATATTGTATGGAAGT  800

seq1  CTGAAGGGGTCTTATCTGGGGGTGGGAGAGGGGACCAGTGGGAAGGGAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGGGTCTTATCTGGGGGTGGGAGAGGGGACCAGTGGGAAGGGAAT  850

seq1  -GGAGGACAAGAGAAGCCAGT-GGAGGCTGGATATGGTCAGATGAAATTT  898
       |||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GGGAGGACAAGAGAAGCCAGTGGGAGGCTGGATATGGTCAGATGAAATTT  900

seq1  CGGTAAACCCATCATTTGGCAAAATAAG-TGTATGTTAATAAAAAGGGCC  947
      |||||||||||||||||||| ||||||| |||||||||||||||||||||
seq2  CGGTAAACCCATCATTTGGC-AAATAAGTTGTATGTTAATAAAAAGGGCC  949

seq1  CTAAAGG-TGACC-TTGGGTTAATATTTGCAGTGACTGCTTGAAGGAGAG  995
      ||||||| ||||| ||||||||||||||||||||||||| |||  || ||
seq2  CTAAAGGTTGACCTTTGGGTTAATATTTGCAGTGACTGC-TGA--GAAAG  996

seq1  AGACTGA-TGGAGGTAATGATGGAGCCTTACACTTGCACAGTGCTCAT-G  1043
      ||||||| || |||||   |||||| |||||||||||||||||||||| |
seq2  AGACTGATTGAAGGTATGAATGGAG-CTTACACTTGCACAGTGCTCATGG  1045

seq1  TTCTTAAAACTTATCACAGATGAAGGCTTCTCAGTTTTGATAGCAAATTA  1093
      ||| | |||| |||||||||   ||||||||||| ||||||||| |||||
seq2  TTCCT-AAACCTATCACAGAATGAGGCTTCTCAG-TTTGATAGCCAATTA  1093