BAC Information

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BAC

Clone NameB6Ng01-320P14
Chromosome4 (Build37)
Map Location 14,305,041 - 14,305,633
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039988, Runx1t1, LOC625831, LOC433687, LOC100040030
Downstream geneLOC433688, Slc26a7, 1700034K16Rik, Otud6b, LOC100040047, Tmem55a, OTTMUSG00000004551, Efcbp1, Tmem64
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-320P14.bB6Ng01-320P14.g
ACCGA110206GA110207
length9591,140
definitionB6Ng01-320P14.b B6Ng01-320P14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattcacacacatttctgccacgtttttgtttacttttttgaggc
atgtattttcagagttctttattccaccattttttgctggcaccctcttg
cgcgcaccggactcgaccagcaagaacgaagctgcaacaggatctttctg
cacacgtttattgggagagcttgattacagaggcgaaaagaccccgagcc
cagaactggtgctgcttttataggactaggagaggcgtgtctcacacctg
gattggttatgcactacgcctcatttgcatgttcctcatctgattggcta
ctctctctcagtacctcacagagcctcattatcatacctcatttgcatgt
ctcacatccgattggttattctctctcagtaccttacagaacctcattat
catacctcatttgcatgtctcacatctgattggttatactctcagtacct
tacagaacctcattatcatgcctaggccaggcagtgtctttgcaaaaaac
tttactgcatatgtacacattggttgtttgtccaatcttatgcgtggtgg
ccagcagtagtcagtgccactcagcaacggcacatgtggcttcccacagc
acccctctttcattatttactataacctgcactatttactcatttattcg
ttacacatgggtcatgctaaagagatggatttccctttgagttaactgtg
cctgagaaaaacaactctcagagtgtttattttagaggaacttcaactag
atttgttcagttttctttattctaaaaataaaaatgaaatagacatagag
caaaatttggcaatcatataaatagatgtactctttaatttaaaaaaatc
agatttacaaatgtagtatacatgtataacaactaggtgatagatgacat
tttcctcctcacattaaaataatgatttcaaaataatgaataaaagataa
agaatccat

gaattctcacctgaggaataccgaatgtcagagaaacacctgaaaaaatg
ttcaacatccttaatcattagggaaatgcaaatcaaaacaatcctgagat
tccacttcactccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgttggcgaggatgtggagaaaggggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttgtttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gaatactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggtatcatcctgagtgaggtaacccaatcacaaa
ggaactcgcacaatatgtactcactgataagtggatattagcccagaaac
ttaggatacccaagatataagatacaacttgccaaacgcatgaaatttaa
gaagaacgaagaccaaagtgtggacactttaccccttcctagaaatggga
acaaaacacccatggaaggagttacagagacaaaatttggagctgtgacg
aaaggatggaccatctagtgattgccatatgcagggatccatcccataat
cagcttccaaatgctgacaccattgcatacactagcaagattttgctgaa
aggacccagatatagctctctcttgtgagactatgccggggcctagcaac
acagaagtggatgatcacagtcagctatggatgggtcacacggccccaat
ggagagctagagaaattacccaagagctaatgggaaactgcaccctatag
tgacacactatgactacagtacccggagctcttgtctctagctgcatatt
gtatccaaagattgcttagtccgcattcactgcaaggagagtcatgtact
tgcacataatgcagtagtaacgcgggaaaaggaatgcgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_14305041_14305633
seq2: B6Ng01-320P14.b_51_643 (reverse)

seq1  GAAGCCACATGTGCCGTTGCTGAGTGGCACTGACTACTGCTGGCCACCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCACATGTGCCGTTGCTGAGTGGCACTGACTACTGCTGGCCACCAC  50

seq1  GCATAAGATTGGACAAACAACCAATGTGTACATATGCAGTAAAGTTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAAGATTGGACAAACAACCAATGTGTACATATGCAGTAAAGTTTTTT  100

seq1  GCAAAGACACTGCCTGGCCTAGGCATGATAATGAGGTTCTGTAAGGTACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGACACTGCCTGGCCTAGGCATGATAATGAGGTTCTGTAAGGTACT  150

seq1  GAGAGTATAACCAATCAGATGTGAGACATGCAAATGAGGTATGATAATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTATAACCAATCAGATGTGAGACATGCAAATGAGGTATGATAATGA  200

seq1  GGTTCTGTAAGGTACTGAGAGAGAATAACCAATCGGATGTGAGACATGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTGTAAGGTACTGAGAGAGAATAACCAATCGGATGTGAGACATGCA  250

seq1  AATGAGGTATGATAATGAGGCTCTGTGAGGTACTGAGAGAGAGTAGCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGGTATGATAATGAGGCTCTGTGAGGTACTGAGAGAGAGTAGCCAA  300

seq1  TCAGATGAGGAACATGCAAATGAGGCGTAGTGCATAACCAATCCAGGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATGAGGAACATGCAAATGAGGCGTAGTGCATAACCAATCCAGGTGT  350

seq1  GAGACACGCCTCTCCTAGTCCTATAAAAGCAGCACCAGTTCTGGGCTCGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACACGCCTCTCCTAGTCCTATAAAAGCAGCACCAGTTCTGGGCTCGG  400

seq1  GGTCTTTTCGCCTCTGTAATCAAGCTCTCCCAATAAACGTGTGCAGAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTTTCGCCTCTGTAATCAAGCTCTCCCAATAAACGTGTGCAGAAAG  450

seq1  ATCCTGTTGCAGCTTCGTTCTTGCTGGTCGAGTCCGGTGCGCGCAAGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGTTGCAGCTTCGTTCTTGCTGGTCGAGTCCGGTGCGCGCAAGAGG  500

seq1  GTGCCAGCAAAAAATGGTGGAATAAAGAACTCTGAAAATACATGCCTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCAGCAAAAAATGGTGGAATAAAGAACTCTGAAAATACATGCCTCAA  550

seq1  AAAAGTAAACAAAAACGTGGCAGAAATGTGTGTGAATGAATTC  593
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTAAACAAAAACGTGGCAGAAATGTGTGTGAATGAATTC  593


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