BAC Information

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BAC

Clone NameB6Ng01-321D19
Chromosome4 (Build37)
Map Location 94,164,285 - 94,283,150
singlet/doubletdoublet
Overlap gene5830433M19Rik, Plaa, LOC667250
Upstream genenone
Downstream geneLrrc19, Ift74, Tek, 4930579C15Rik, LOC100039252, Mysm1, LOC100039265, LOC665029, Jun, LOC100042411, 2310009E04Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-321D19.bB6Ng01-321D19.g
ACCGA110399GA110400
length589141
definitionB6Ng01-321D19.b B6Ng01-321D19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,282,556 - 94,283,150)(94,164,285 - 94,164,425)
sequence
ttccaggactattgtaaagcacctctaccttctgagggcttactggacag
ctgtataagctaccatatatcctgcccacatgtctgtccctgtacttctc
acagcagctgaaacaatctgcttatttatcccttccccttgagaacaaga
gttggctggtgtctttaatctacagcatctgattcagtggcaagcagaaa
ctatgtgtgtgtcttttgataccctccaatacaaaggcattcccaattac
aaaaatttgctatatttgggctcagaaggtagttcagtggtaaagaaaat
agtattaccccaaccattctccagcaccactaagagaaaaaaaaatatgt
cttttttttaaaaaagataaactttttgggaagatatatatgcctaactt
gacttataattttaattttaaaaataaatcagcagtaccccagagctctt
gactctagctgcatatgtatcaaaagatggcctagtcggccatcactgga
aagagaggcccattggtcaggcaaactttatatgccccagtacaggggaa
cgccagggccaaaaaatgggagtgggtgggtaggggagt

actaaataagaaatggtctgtgtgaagatggcctagtcagccatcagtgg
aaagagaggcccattggtcttgcaaactttatatgccccagtacagggga
acgccagggccaagaagtgggagtgggtgggtaggggagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_94282556_94283150
seq2: B6Ng01-321D19.b_45_639 (reverse)

seq1  ACTCCCCTACCCACCCACTCCCATTTTTTGGCCCTGGCGTTCCCCTGTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCCTACCCACCCACTCCCATTTTTTGGCCCTGGCGTTCCCCTGTAC  50

seq1  TGGGGCATATAAAGTTTGCCTGACCAATGGGCCTCTCTTTCCAGTGATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCATATAAAGTTTGCCTGACCAATGGGCCTCTCTTTCCAGTGATGG  100

seq1  CCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCTGG  150

seq1  GGTACTGCTGATTTATTTTTAAAATTAAAATTATAAGTCAAGTTAGGCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACTGCTGATTTATTTTTAAAATTAAAATTATAAGTCAAGTTAGGCAT  200

seq1  ATATATCTTCCCAAAAAGTTTATCTTTTTTAAAAAAAAGACATATTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATCTTCCCAAAAAGTTTATCTTTTTTAAAAAAAAGACATATTTTTT  250

seq1  TTTCTCTTAGTGGTGCTGGAGAATGGTTGGGGTAATACTATTTTCTTTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTTAGTGGTGCTGGAGAATGGTTGGGGTAATACTATTTTCTTTAC  300

seq1  CACTGAACTACCTTCTGAGCCCAAATATAGCAAATTTTTGTAATTGGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAACTACCTTCTGAGCCCAAATATAGCAAATTTTTGTAATTGGGAA  350

seq1  TGCCTTTGTATTGGAGGGTATCAAAAGACACACACATAGTTTCTGCTTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTGTATTGGAGGGTATCAAAAGACACACACATAGTTTCTGCTTGC  400

seq1  CACTGAATCAGATGCTGTAGATTAAAGACACCAGCCAACTCTTGTTCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAATCAGATGCTGTAGATTAAAGACACCAGCCAACTCTTGTTCTCA  450

seq1  AGGGGAAGGGATAAATAAGCAGATTGTTTCAGCTGCTGTGAGAAGTACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAAGGGATAAATAAGCAGATTGTTTCAGCTGCTGTGAGAAGTACAG  500

seq1  GGACAGACATGTGGGCAGGATATATGGTAGCTTATACAGCTGTCCAGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGACATGTGGGCAGGATATATGGTAGCTTATACAGCTGTCCAGTAA  550

seq1  GCCCTCAGAAGGTAGAGGTGCTTTACAATAGTCCTGGAAGAATTC  595
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCAGAAGGTAGAGGTGCTTTACAATAGTCCTGGAAGAATTC  595


seq1: chr4_94164285_94164425
seq2: B6Ng01-321D19.g_72_212

seq1  ACTAAATAAGAAATGGTCTGTGTGAAGATGGCCTAGTCAGCCATCAGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAATAAGAAATGGTCTGTGTGAAGATGGCCTAGTCAGCCATCAGTGG  50

seq1  AAAGAGAGGCCCATTGGTCTTGCAAACTTTATATGCCCCAGTACAGGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAGGCCCATTGGTCTTGCAAACTTTATATGCCCCAGTACAGGGGA  100

seq1  ACGCCAGGGCCAAGAAGTGGGAGTGGGTGGGTAGGGGAGTG  141
      |||||||||||||||||||||||||||||||||||||||||
seq2  ACGCCAGGGCCAAGAAGTGGGAGTGGGTGGGTAGGGGAGTG  141


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