BAC Information

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BAC

Clone NameB6Ng01-322A17
Chromosome4 (Build37)
Map Location 71,333,513 - 71,334,317
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039565, LOC100039979
Downstream geneLOC667638, EG667649, Tle1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-322A17.bB6Ng01-322A17.g
ACCGA110992GA110993
length1,179810
definitionB6Ng01-322A17.b B6Ng01-322A17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatactgaatggccgaaaagcccctgaaaaaaat
gttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccgtgaga
tttctcctcacacaagtcagaatggctaagatcaaaaattcaggtgacag
cagatgctggcaaggatgtggagaaagagaaacacccctccattgttggt
gggattgcaatcgtgtacaaccactctggcaatcagtctggaggttcctc
agaaaattggacatagtactactggaggatcctgcaatacctgtccattg
gcatataacaagatgttccaaccagtaagaaggacacatgctccactatg
ttcttagcagccttatttataatagccagaaattggaaagacccctgatg
cccctcaacagaggaatgaatacagaaaatgtggtacatttacacaatgg
agtactactcagctattaaaaggaatgaatttatgaaattcctagggaaa
tgtgtggacctggagggcattatcctgagtgaggtaacccaatcataaaa
aaactcacatgatatttactcactgaaaactggatattagctcagaaact
tagaatacccaagatacaattagcaaaacatatgaaacttatgaagaacg
aagaccaaagtgtggacactttgctccttcttagaattgggaacaaacac
ctatggaaggagtcacagagacaaagtttgtacctgagacgaaaggatgg
accatctagagactgccatactcagggatccatcccatattcaacctcca
aatgctgacaccattgcatatactagcaagattttgctgaaaggaccctg
atatagctgtctcttgtgaggctatgcaggggcctagcaaacacagaaat
ggatgctcacagtcagctattggatggatcacagtgcccccaatggagaa
gctagagaagtacacaagactaaaggtggatctgcaaccctattaggtgg
aacaacaatattgactaaccagtaacccccccgccccgagctcgtgtcct
tagctgcaatatgtattcagaagatcgcctaagtggcctcagtggaaaag
aaagccaatttgatctgctagattatatacctccagtacagggtaggcca
ggggccagaattggaagtctgaaaggaga
gaattcttccctgctattaccatgtttttttttctctcttctacaaggga
ttaattgcacaggtagcagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtggtctttaaaggcagggtctttctatgtagacctga
ctgtcctggaactctatttagaccaggctgacctcaaacttagagagata
cacctgccttagactatcaaatgctggaattaaagacatgagtcaccaac
tagtattttcttaggtgtaattccttaaagcttaacaataaaaataaatt
taatgagtatttgtaaatctgaatttgtcatcatttctcagttataagta
ataaatgtggtatgtattttttctagtaccttgtagctgaccaaattaca
tagtgttaggataatcatctaatttttagtagtctcatttgtttttaata
taaaatgattgaattaaatatttgacaaatctcctattactaacattcta
aaattctaatatttattttcatatatctctaaaagaggctaactaatcat
ttcatgcttcgtgaatattctactgtttcttttaggaggtttcaaacttt
aaatcaaggatatgttcatgccttacgtagccatgcatttattttacaaa
tatcattattataattcaccataaacttatgcctactgttgagtatttag
cctcttaaataatgctatacttatttggagtactggatgtccctcaagac
tcattgtgtagaaagaagattgttttccttcccctggagctgctgggagg
tagggaaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_71333513_71334317
seq2: B6Ng01-322A17.g_68_877

seq1  GAATTCTTCCCTGCTATTACCATGTTTTTTTTTCTCTCTTCTACAAGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCCTGCTATTACCATGTTTTTTTTTCTCTCTTCTACAAGGGA  50

seq1  TTAATTGCACAGGTAGCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTGCACAGGTAGCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  100

seq1  GTGTGTGTGTGTGTGGTCTTTAGAGGCAGGGTCTTTCTATGTAGACCTGA  150
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGGTCTTTAAAGGCAGGGTCTTTCTATGTAGACCTGA  150

seq1  CTGTCCTGGAACTCTATTTAGACCAGGCTGACCTCAAACTTAGAGAGATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTGGAACTCTATTTAGACCAGGCTGACCTCAAACTTAGAGAGATA  200

seq1  CACCTGCCTTAGACTATCAAATGCTGGAATTAAAGACATGAGTCACCAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGCCTTAGACTATCAAATGCTGGAATTAAAGACATGAGTCACCAAC  250

seq1  TAGTATTTTCTTAGGTGTAATTCCTTAAAGCTTAACAATAAAAATAAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATTTTCTTAGGTGTAATTCCTTAAAGCTTAACAATAAAAATAAATT  300

seq1  TAATGAGTATTTGTAAATCTGAATTTGTCATCATTTCTCAGTTATAAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAGTATTTGTAAATCTGAATTTGTCATCATTTCTCAGTTATAAGTA  350

seq1  ATAAATGTGGTATGTATTTTTTCTAGTACCTTGTAGCTGACCAAATTACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGTGGTATGTATTTTTTCTAGTACCTTGTAGCTGACCAAATTACA  400

seq1  TAGTGTTAGGATAATCATCTAATTTTTAGTAGTCTCATTTGTTTTTAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTTAGGATAATCATCTAATTTTTAGTAGTCTCATTTGTTTTTAATA  450

seq1  TAAAATGATTGAATTAAATATTTGACAAATCTCCTATTACTAACATTCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGATTGAATTAAATATTTGACAAATCTCCTATTACTAACATTCTA  500

seq1  AAATTCTAATATTTATTTTCATATATCTCTAAAAGAGGCTAACTAATCA-  549
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AAATTCTAATATTTATTTTCATATATCTCTAAAAGAGGCTAACTAATCAT  550

seq1  TTCATGCTTCGTGAATATTCTACTGTTTCTTTTAGGAGG-TTCAAACTTT  598
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TTCATGCTTCGTGAATATTCTACTGTTTCTTTTAGGAGGTTTCAAACTTT  600

seq1  AAATCAAGGATATGTTCATGCCTTAGGTAGCCATGCA-TTATTTTACAAA  647
      ||||||||||||||||||||||||| ||||||||||| ||||||||||||
seq2  AAATCAAGGATATGTTCATGCCTTACGTAGCCATGCATTTATTTTACAAA  650

seq1  TATCTTTATTATAATTCACCATAAACTTATGCCTACTGTTGAGTATTTAG  697
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATTATTATAATTCACCATAAACTTATGCCTACTGTTGAGTATTTAG  700

seq1  CC-CTTAAATAATGCTATAGTTATTTGGAGTACTGGATGTCCCTCAAGAC  746
      || |||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CCTCTTAAATAATGCTATACTTATTTGGAGTACTGGATGTCCCTCAAGAC  750

seq1  CCA-TGTGTAGAAAGAAGATTGGTTTCCTTCCACTGGAGCTGCTGGGAGG  795
       || |||||||||||||||||| ||||||||| |||||||||||||||||
seq2  TCATTGTGTAGAAAGAAGATTGTTTTCCTTCCCCTGGAGCTGCTGGGAGG  800

seq1  TAGGGAAAGT  805
      ||||||||||
seq2  TAGGGAAAGT  810