BAC Information

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BAC

Clone NameB6Ng01-322D06
Chromosome4 (Build37)
Map Location 5,452,305 - 5,452,881
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC622019, Impad1, LOC100039338
Downstream gene1700012H17Rik, LOC669309, 3110003A22Rik, Cyp7a1, Sdcbp, Nsmaf, LOC100039397
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-322D06.bB6Ng01-322D06.g
ACCGA111106GA111107
length5771,204
definitionB6Ng01-322D06.b B6Ng01-322D06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatggctagtctatgatctcattgtaccttagtcaatctagtaa
aagaggctctagttcgcttctactggctgttttatttttaattttttaaa
ttactttttgtccattggttggatgtaagtatctgcatctgactctttca
gctgcttctagagcctctctgaggtcagccatgctaggctcctgtctgta
agcacaccacagcatcagtaacagtgtcaggccttggggatttccttgag
ctagatcccaatttggacctgtcactggacttcctttccctcaggctctt
ctccattttgtccctgaaagtttttttaaagggaaaattctgggtcagag
ggttttttttgtttgtttgtttgttttgttgggtttttttgttgttgttt
agtttttgtttttgtttttgactgtgggatggcaacccgatcccttcact
tgatgccctgtcagtctactggagaaggactctacaagttccctctcccc
acttttgggcattttgtttaagttccctccctttgactcccgagagtctt
tcacttccctggtctctggcacattct

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtacccaaggagctaaagggatcttcaaccct
ataggtggaacacattatgaactaaccagtaccccttgagctctgactct
agctgcatatgtatcaaaaagatggcttagtcgccatccactggaagaaa
agccccatgacacgcaaacttttgtggtgcccggttacatggtacgctag
ccacgggagggagaatgtgggtgtgattacgagcgaactccttactacca
gcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_5452305_5452881
seq2: B6Ng01-322D06.b_49_625

seq1  GAATTCCATGGCTAGTCTATGATCTCATTGTACCTTAGTCAATCTAGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGGCTAGTCTATGATCTCATTGTACCTTAGTCAATCTAGTAA  50

seq1  AAGAGGCTCTAGTTCGCTTCTACTGGCTGTTTTATTTTTAATTTTTTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGCTCTAGTTCGCTTCTACTGGCTGTTTTATTTTTAATTTTTTAAA  100

seq1  TTACTTTTTGTCCATTGGTTGGATGTAAGTATCTGCATCTGACTCTTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTTTTGTCCATTGGTTGGATGTAAGTATCTGCATCTGACTCTTTCA  150

seq1  GCTGCTTCTAGAGCCTCTCTGAGGTCAGCCATGCTAGGCTCCTGTCTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTTCTAGAGCCTCTCTGAGGTCAGCCATGCTAGGCTCCTGTCTGTA  200

seq1  AGCACACCACAGCATCAGTAACAGTGTCAGGCCTTGGGGATTTCCTTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACACCACAGCATCAGTAACAGTGTCAGGCCTTGGGGATTTCCTTGAG  250

seq1  CTAGATCCCAATTTGGACCTGTCACTGGACTTCCTTTCCCTCAGGCTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATCCCAATTTGGACCTGTCACTGGACTTCCTTTCCCTCAGGCTCTT  300

seq1  CTCCATTTTGTCCCTGAAAGTTTTTTTAAAGGGAAAATTCTGGGTCAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATTTTGTCCCTGAAAGTTTTTTTAAAGGGAAAATTCTGGGTCAGAG  350

seq1  GGTTTTTTTTGTTTGTTTGTTTGTTTTGTTGGGTTTTTTTGTTGTTGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTTTTGTTTGTTTGTTTGTTTTGTTGGGTTTTTTTGTTGTTGTTT  400

seq1  AGTTTTTGTTTTTGTTTTTGACTGTGGGATGGCAACCCGATCCCTTCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTGTTTTTGTTTTTGACTGTGGGATGGCAACCCGATCCCTTCACT  450

seq1  TGATGCCCTGTCAGTCTACTGGAGAAGGACTCTACAAGTTCCCTCTCCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCCCTGTCAGTCTACTGGAGAAGGACTCTACAAGTTCCCTCTCCCC  500

seq1  ACTTTTGGGCATTTTGTTTAAGTTCCCTCCCTTTGACTCCCGAGAGTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTGGGCATTTTGTTTAAGTTCCCTCCCTTTGACTCCCGAGAGTCTT  550

seq1  TCACTTCCCTGGTCTCTGGCACATTCT  577
      |||||||||||||||||||||||||||
seq2  TCACTTCCCTGGTCTCTGGCACATTCT  577


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