BAC Information

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BAC

Clone NameB6Ng01-322J01
Chromosome4 (Build37)
Map Location 146,959,791 - 146,960,737
singlet/doubletsinglet
Overlap genenone
Upstream geneOTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673
Downstream gene2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2, Ubiad1, Frap1, Angptl7, Exosc10, LOC100043151
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-322J01.bB6Ng01-322J01.g
ACCGA111375GA111376
length1,1461,156
definitionB6Ng01-322J01.b B6Ng01-322J01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
aaggaagtatgagagagggggctggtgagatggctcagtgggtaagagca
cccgtctgctcttccgaaggtccagagttcaaatcccagcaaccacatgg
tggttcacaaccatctgtaacaagatctgacgccctcttctggtgtgtct
gaagacagctacagtgtacttacatataataaataaatctttaaaaaaaa
ggaagtatgagagaaaaatatagaaaaatacatgaaagcatggcttcata
gatttcacggatagctatccagactttgctgtgtctgtgcatggttctga
agtcattaatacccacttattgaacaaaagtcctataagtctcagaaaaa
tgctgctcattgacacatattacaaaacattgtggtgactggtcctgtcg
tgccttaatactccaatctaccataaggaatgatttagtttccattcttt
tcttaaatcatctacagaatgttaatattttgtacatctcagaatataca
ttctgaacaaaacctcaacaactcactattaaggtattatcttcatctta
atttcatgtatgagttcattcatacaaatatcatgaatctgtaaatctta
gagaaaaatcctttttagagaagatgaggtgcatactcatgcacagttta
gaaatccaaccatcctggaaatacatttggaagttctggaaaacgtacta
ttactccaagttcaagtattacattagaatatttatcctaaattcaggaa
gtttcagtaaattaggatctaagaaaaaagtcaaatggtacaatgaacaa
atccatatcactccaggtattttccttgagtttaaaaaatacaaggaaat
tattcaacttgtgtgaaactactgaatgataacatttcattggtctcaat
attggaatttgatgaaacaggacctcctcattgggtagaacctaagtacg
agaagaagcaataatgggcccttgatttcagatgatcattagtatttctg
caactgcttcatcaggatgttgaaacacataccagcaaatggaaatatgt
ggcttgagtagctctactgtctgaatgcaaccagctgacagtctctcttg
atctcattgcacaatgttaagtgaattaagcctcactgcttatgac
gaattctcacctgaggaataccgaatggctgagaagcacctagaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccactcataccactcagaatggccaagatcaaaaattcaggtgacagca
gatgctggagaggatgcggagaaagaagaacactcctccattgttggtgg
gattgcaagcttatacaaccactctggaaatcagtctggcggtttctcag
aaaattggacatagtactaccggaggatcccgcaatacctctcctgggca
tatatccagaaaatgttctaactggtaataagaacacatgctccactata
ttcatagcagccttatttataatagccagaaactggaaaaacccagatgt
ccctcaacagaggaatggatacagaaaatgtggtacatttacacaatgga
gtactactcagctattaaaaagaatgaatttatgaaattcctaggcaaat
ggttggatctggagggcatcatcctgagttaggtaacccaatcacaaaag
aactcaaatgatatgttctcactgataagaggatattagcccagaaactt
agcatacccaagatataagatacaatttgcgaaacacatgaaactcaaga
agattgaagaccaaagtgtggacactttgcccctttttagaattgggaac
aaaacacccatggaaggatttacaaagacaaagtttggagctgagacaaa
aggatgggccatctagagactgccataaccggggatccatcccataatca
gcctccaaacgctgacaccattgcatacactagtaagattttgctgaaag
cacccttatatagctgtctcttgtgagactatgccggagcctagcaaaca
cagaagtggatgctcacagtcagctattggatggatcacagggccccaat
ggaggagctagagaaagtacccaaggagctatagggaactgcaaccctat
agtgacacatatgactaccagttacccgagctctgtctctagctgcatat
gttattcaaagatgctagtcggcatcactgggaagagagttccattgtca
tgccaactaaatgccagtacaggatgcaagtgctaaggtagattggctgt
ggctat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146959791_146960737
seq2: B6Ng01-322J01.b_242_1189

seq1  AAGGAAGTATGAGAGAAAAATATAGAAAAATACATGAAAGCATGGCTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGTATGAGAGAAAAATATAGAAAAATACATGAAAGCATGGCTTCA  50

seq1  TAGATTTCACGGATAGCTATCCAGACTTTGCTTTGTCTGTGCATGGTTCT  100
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TAGATTTCACGGATAGCTATCCAGACTTTGCTGTGTCTGTGCATGGTTCT  100

seq1  GAAGTCATTAATACCCACTTATTGAACAAAAGTCCTATAAGTCTCAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCATTAATACCCACTTATTGAACAAAAGTCCTATAAGTCTCAGAAA  150

seq1  AATGCTGCCCATTGACACATATTACAAAACATTGTGGTGACTGGTCCTGT  200
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTGCTCATTGACACATATTACAAAACATTGTGGTGACTGGTCCTGT  200

seq1  CGTGCCTTAATACTCCAATCTACCATAAGGAATGATTTAGATTTCCATTC  250
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CGTGCCTTAATACTCCAATCTACCATAAGGAATGATTTAG-TTTCCATTC  249

seq1  TTTTCTTAAATCATCTACAGAATGTTAATATTTTGCACATCTCAGAATAT  300
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTTTCTTAAATCATCTACAGAATGTTAATATTTTGTACATCTCAGAATAT  299

seq1  ACATTCTGAACAAAACCTCAACAACTCACTATTAAGGTATTATCTTCATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCTGAACAAAACCTCAACAACTCACTATTAAGGTATTATCTTCATC  349

seq1  TTAATTTCATGTATGAGTTCATTCATACAAATATCATGAATCTGTAAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTCATGTATGAGTTCATTCATACAAATATCATGAATCTGTAAATC  399

seq1  TTAGAGAAAAATCCTTTTTAGAGTAGATGAGGTGCATACTCATGCACAGT  450
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TTAGAGAAAAATCCTTTTTAGAGAAGATGAGGTGCATACTCATGCACAGT  449

seq1  TTAGAAATCCAACCATCCTGGAAATACATTTGGAAGTTCTGGAAAACGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAATCCAACCATCCTGGAAATACATTTGGAAGTTCTGGAAAACGTA  499

seq1  CTATTACTCCAAGTTCAAGTATTATATTAGAATATTTATCCTAAGTTCAG  550
      |||||||||||||||||||||||| ||||||||||||||||||| |||||
seq2  CTATTACTCCAAGTTCAAGTATTACATTAGAATATTTATCCTAAATTCAG  549

seq1  GAAGTTTCAGTAAATTAGGATCTAAGAAAAAAGTCAAATGGTACAATGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTTCAGTAAATTAGGATCTAAGAAAAAAGTCAAATGGTACAATGAA  599

seq1  CAAATCCAT----------GTATTTTCCTTGAGTTTAAAAAATACAAGGA  640
      |||||||||          |||||||||||||||||||||||||||||||
seq2  CAAATCCATATCACTCCAGGTATTTTCCTTGAGTTTAAAAAATACAAGGA  649

seq1  AATTGTTCAACTTGTGTGAACCTACTGAATGATAACATTTCATTGGTCTC  690
      |||| ||||||||||||||| |||||||||||||||||||||||||||||
seq2  AATTATTCAACTTGTGTGAAACTACTGAATGATAACATTTCATTGGTCTC  699

seq1  AATATTGGAATTTGATGAAACAGGACCTCATTA----GTAGATTCTAAGT  736
      ||||||||||||||||||||||||||||| | |    |||||  ||||||
seq2  AATATTGGAATTTGATGAAACAGGACCTCCTCATTGGGTAGAACCTAAGT  749

seq1  ACGAGAAGAAGCAATAGT-GGCCTTTGATTTCAGATGGTCATTAGTATTT  785
      |||||||||||||||| | |||| ||||||||||||| ||||||||| ||
seq2  ACGAGAAGAAGCAATAATGGGCCCTTGATTTCAGATGATCATTAGTA-TT  798

seq1  TCTGCCAACTGCTTCATCAGAGATGTTGAAACACATACCAGGCAAATGAA  835
      |||| ||||||||||||||| ||||||||||||||||||| ||||||| |
seq2  TCTG-CAACTGCTTCATCAG-GATGTTGAAACACATACCA-GCAAATGGA  845

seq1  AATTAGGTGGCTTAAGTAGCTCTTACCTGTCTAGAAATTGCAACCAGGTG  885
      || || ||||||| |||||||||   |||||| |||  ||||||||| ||
seq2  AA-TATGTGGCTTGAGTAGCTCT--ACTGTCT-GAA--TGCAACCAGCTG  889

seq1  AACAGTCTCTCTTGATTCTCATTGCAC-ATGTTCAGTGGATTTAGGCCTC  934
       |||||||||||||| ||||||||||| ||||| ||| || ||| |||||
seq2  -ACAGTCTCTCTTGA-TCTCATTGCACAATGTTAAGT-GAATTAAGCCTC  936

seq1  ACTGCTTAATGAC  947
      ||||||| |||||
seq2  ACTGCTT-ATGAC  948