BAC Information

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BAC

Clone NameB6Ng01-322K16
Chromosome4 (Build37)
Map Location 146,364,536 - 146,506,075
singlet/doubletdoublet
Overlap geneLOC100043034, LOC666514, LOC100041561, LOC100041570
Upstream gene1700029I01Rik, LOC236069, LOC384084, LOC666386, LOC666390, LOC100041433, LOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498
Downstream geneOTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-322K16.bB6Ng01-322K16.g
ACCGA111451GA111452
length1,0321,034
definitionB6Ng01-322K16.b B6Ng01-322K16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(146,505,035 - 146,506,075)(146,364,536 - 146,365,224)
sequence
gaattcttctaagcccacctacttatgggccttttaattaattagcttcc
cacttcttcacagcaatgtttggtgttttgaatttttgcttgcttgcttg
cttgcttgcttgcttattcgtttctttgcttttaatttgtctttttctta
aactcatctaatcgtgcaggaatcccacactccccatcaggaaccactcc
tccaactctgttgcaggctgccttccacacaacttcccaggacctactct
gcaaagcttcttcacaaagttgctgccagactagaccagagctggatgta
gtaggacactgcacctgggttctgaacccttcagatacaatggatcctgt
ctaacttctcatattgtgcgtgtagccctctggactataaatgcacaaaa
ttaagcagtccctttgaattctgatgctcagaacagatacccaaaacaaa
caaaaacgtagataaaatgtccttggctcaaaccacaaaccatagaggta
tcttataaggagcacaatttatgtgatatccaagacaaaggatggaaaac
ccacagtcatgatcaaggacattaaagtttgtaaacctgtgaatccactc
agacaggaacaaaatgaatcttggtcaagaaaataacaccagatgcctga
aggaaataaggacaatataaaatattaaaattatgttcaataggtgcata
gaaatgccacaaaaaaaatcctgaagagaaaatgcagtgaggcgaataaa
aatgatacatagagaacctgtgggagacagattatcagacttaaagaaaa
agtagaggaggtggatgcctcaatcaaagaaaatggtgaattaaaatgat
gttaggtcaagggacaatattatttactgcttgaaggatgaggcaataaa
gagaaactcctttgggaaaactgtcctgatctttgtcacaaaaaaaaagt
aggaaaggagaaggaagaagaaagaagaagaagaaagaaagaaagaagaa
gaaagagagagagagagagagagagagagaga
gaattcatcagaaaattcatacaggagagaaaccttacaaatgcagtgaa
tgtgacaaatgctttaccaaaccatcccatcttagtattcatcagagaat
tcatacaggagagaaaccttacaaatgcagtgaatgtgaaaaatgcttta
ctgtaaaaagcagtctgagaattcatcagaaaattcatacaggagagaaa
ccttacaaatgcagtgaatgtgacaaatgctttaccaaaccatcccatct
tagtattcatcagagaattcatacaggagagaaaccttacaaatgcagtg
aatgtgaaaaatgctttaatgaaaaaaacattctgaaaattcatcagaga
attcatacaggagagagaccttacaaatgtcgtgaatgtgacaaatgctt
ttcccgaaaattccatcttggtattcatcagagaattcatacaggaaaga
aaccttacaaatgtagtgaatgtgacaaatgctttactacaaaaggcaat
ctgataattcatcagagaattcatacaagagagaaacctcacaaatgtag
tgaatgtgacaaatgctttacccagaaatcccatcttagtattcatcaga
aaattcatacaggagagaaaccttacaaatagattgtatgtgacaaatac
aatactcacaatgtcagtcttagaaatcatcagttatttcatacagtaga
gaatctttataaatgaagtgaacgagacaatcctttaccaagatatatca
tctcaaaattcattagagaatacttagagaagacaaacttttcaaatata
ttgtaggtatgaatcctttccttttggcctatttcctagactgtaacagt
gaatacttacaggctagaaacttaactcatgcattgtatgaagaaatatc
tttgacttcatttcaggtcagagagaacatctaagaactttttagggtaa
agaattttgttggggaaaatgttgtattcttgacaacacttggaggcctc
caccactagagattagtatgattatggaaaatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146505035_146506075
seq2: B6Ng01-322K16.b_48_1079 (reverse)

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCTTTCTTTCTTTCTT  50
      ||||||||||||||||||||||||||||||||||   |||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTT--CTTCTTTCTTTCTT  48

seq1  TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTTCCTTACTTTTTTT  100
      || |||||   ||||||| ||||| |||   |||||||| ||| ||||||
seq2  TC-TTCTT--CTTCTTTC-TTCTTCCTT--CTCCTTTCC-TAC-TTTTTT  90

seq1  TTTGTGACAAAGATCAGGACAGTTTT-CCAAAGGAGTTTCTCTTTATTGC  149
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTTGTGACAAAGATCAGGACAGTTTTCCCAAAGGAGTTTCTCTTTATTGC  140

seq1  CTCATCCTTCAAGCAGTAAATAATATTGTCCCTTGACCTAACATCATTTT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCCTTCAAGCAGTAAATAATATTGTCCCTTGACCTAACATCATTTT  190

seq1  AATTCACCATTTTCTTTGATTGAGGCATCCACCTCCTCTACTTTTTCTTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCACCATTTTCTTTGATTGAGGCATCCACCTCCTCTACTTTTTCTTT  240

seq1  AAGTCTGATAATCTGTCTCCCACAGGTTCTCTATGTATCATTTTTATTCG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTGATAATCTGTCTCCCACAGGTTCTCTATGTATCATTTTTATTCG  290

seq1  CCTCACTGCATTTTCTCTTCAGGATTTTTTTTGTGGCATTTCTATGCACC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACTGCATTTTCTCTTCAGGATTTTTTTTGTGGCATTTCTATGCACC  340

seq1  TATTGAACATAATTTTAATATTTTATATTGTCCTTATTTCCTTCAGGCAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAACATAATTTTAATATTTTATATTGTCCTTATTTCCTTCAGGCAT  390

seq1  CTGGTGTTATTTTCTTGACCAAGATTCATTTTGTTCCTGTCTGAGTGGAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGTTATTTTCTTGACCAAGATTCATTTTGTTCCTGTCTGAGTGGAT  440

seq1  TCACAGGTTTACAAACTTTAATGTCCTTGATCATGACTGTGGGTTTTCCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGGTTTACAAACTTTAATGTCCTTGATCATGACTGTGGGTTTTCCA  490

seq1  TCCTTTGTCTTGGATATCACATAAATTGTGCTCCTTATAAGATACCTCTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTGTCTTGGATATCACATAAATTGTGCTCCTTATAAGATACCTCTA  540

seq1  TGGTTTGTGGTTTGAGCCAAGGACATTTTATCTACGTTTTTGTTTGTTTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTGTGGTTTGAGCCAAGGACATTTTATCTACGTTTTTGTTTGTTTT  590

seq1  GGGTATCTGTTCTGAGCATCAGAATTCAAAGGGACTGCTTAATTTTGTGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATCTGTTCTGAGCATCAGAATTCAAAGGGACTGCTTAATTTTGTGC  640

seq1  ATTTATAGTCCAGAGGGCTACACGCACAATATGAGAAGTTAGACAGGATC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATAGTCCAGAGGGCTACACGCACAATATGAGAAGTTAGACAGGATC  690

seq1  CATTGTATCTGAAGGGTTCAGAACCCAGGTGCAGTGTCCTACTACATCCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTATCTGAAGGGTTCAGAACCCAGGTGCAGTGTCCTACTACATCCA  740

seq1  GCTCTGGTCTAGTCTGGCAGCAACTTTGTGAAGAAGCTTTGCAGAGTAGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGGTCTAGTCTGGCAGCAACTTTGTGAAGAAGCTTTGCAGAGTAGG  790

seq1  TCCTGGGAAGTTGTGTGGAAGGCAGCCTGCAACAGAGTTGGAGGAGTGGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGGAAGTTGTGTGGAAGGCAGCCTGCAACAGAGTTGGAGGAGTGGT  840

seq1  TCCTGATGGGGAGTGTGGGATTCCTGCACGATTAGATGAGTTTAAGAAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGATGGGGAGTGTGGGATTCCTGCACGATTAGATGAGTTTAAGAAAA  890

seq1  AGACAAATTAAAAGCAAAGAAACGAATAAGCAAGCAAGCAAGCAAGCAAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAATTAAAAGCAAAGAAACGAATAAGCAAGCAAGCAAGCAAGCAAG  940

seq1  CAAGCAAAAATTCAAAACACCAAACATTGCTGTGAAGAAGTGGGAAGCTA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAAAAATTCAAAACACCAAACATTGCTGTGAAGAAGTGGGAAGCTA  990

seq1  ATTAATTAAAAGGCCCATAAGTAGGTGGGCTTAGAAGAATTC  1041
      ||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTAAAAGGCCCATAAGTAGGTGGGCTTAGAAGAATTC  1032

seq1: chr4_146364536_146365224
seq2: B6Ng01-322K16.g_371_1059

seq1  GTGAAAAATGCTTTAATGAAAAAAACATTCTGAAAATTCATCAGAGAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAAATGCTTTAATGAAAAAAACATTCTGAAAATTCATCAGAGAATT  50

seq1  CATACAGGAGAGAGACCTTACAAATGTCGTGAATGTGACAAATGCTTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAGGAGAGAGACCTTACAAATGTCGTGAATGTGACAAATGCTTTTC  100

seq1  CCGAAAATTCCATCTTGGTATTCATCAGAGAATTCATACAGGAAAGAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAAAATTCCATCTTGGTATTCATCAGAGAATTCATACAGGAAAGAAAC  150

seq1  CTTACAAATGTAGTGAATGTGACAAATGCTTTACTACAAAAGGCAATCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAAATGTAGTGAATGTGACAAATGCTTTACTACAAAAGGCAATCTG  200

seq1  ATAATTCATCAGAGAATTCATACAAGAGAGAAACCTCACAAATGTAGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTCATCAGAGAATTCATACAAGAGAGAAACCTCACAAATGTAGTGA  250

seq1  ATGTGACAAATGCTTTACCCAGAAATCCCATCTTAGTATTCATCAGAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGACAAATGCTTTACCCAGAAATCCCATCTTAGTATTCATCAGAAAA  300

seq1  TTCATACAGGAGAGAAACCTTACAAATAGATTGTATGTGACAAATACAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATACAGGAGAGAAACCTTACAAATAGATTGTATGTGACAAATACAAT  350

seq1  ACTCACAATGTCAGTCTTAGAAATCATCAGTTATTTCATACAGTAGAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACAATGTCAGTCTTAGAAATCATCAGTTATTTCATACAGTAGAGAA  400

seq1  TCTTTATAAATGAAGTGAACGAGACAATCCTTTACCAAGATATATCATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATAAATGAAGTGAACGAGACAATCCTTTACCAAGATATATCATCT  450

seq1  CAAAATTCATTAGAGAATACTTAGAGAAGACAAACTTTTCAAATATATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTCATTAGAGAATACTTAGAGAAGACAAACTTTTCAAATATATTG  500

seq1  TAGGTATGAATCCTTTCCTTTTGGCCTATTTCCTAGACTGTAACAGTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTATGAATCCTTTCCTTTTGGCCTATTTCCTAGACTGTAACAGTGAA  550

seq1  TACTTACAGGCTAGAAACTTAACTCATGCATTGTATGAAGAAATATCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTACAGGCTAGAAACTTAACTCATGCATTGTATGAAGAAATATCTTT  600

seq1  GACTTCATTTCAGGTCAGAGAGAACATCTAAGAACTTTTTAGGGTAAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCATTTCAGGTCAGAGAGAACATCTAAGAACTTTTTAGGGTAAAGA  650

seq1  ATTTTGTTGGGGAAAATGTTGTATTCTTGACAACACTTG  689
      |||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTTGGGGAAAATGTTGTATTCTTGACAACACTTG  689