BAC Information

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BAC

Clone NameB6Ng01-323C24
Chromosome4 (Build37)
Map Location 145,658,575 - 145,659,720
singlet/doubletsinglet
Overlap geneLOC100041433
Upstream geneVps13d, Tnfrsf1b, Tnfrsf8, LOC666282, 9230115A19Rik, LOC195576, LOC622846, LOC666314, LOC545701, OTTMUSG00000010965, LOC666334, LOC545703, LOC384081, LOC100041379, LOC666349, LOC666351, LOC545704, 1700029I01Rik, LOC236069, LOC384084, LOC666386, LOC666390
Downstream geneLOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323C24.bB6Ng01-323C24.g
ACCGA111833GA111834
length1,1901,137
definitionB6Ng01-323C24.b B6Ng01-323C24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgatggcctttttcagtaaagcatttgtcacattcactacat
ttgtaaggtttctctcctgtatgaattctctgatgaattctcagtttgcc
cttttcagtaaaggatttgtcacattcagtgcatttgtaaggtttctctc
ctgtatgaattctctgatgaatcctcagactgcctttgaaagtaaagcat
ttgtcacattcagtgcatttgtaaggtttctctcctgtatgaattctctg
atgaattctcaaacagccattttcagtaaaggatttgtcacattcactac
atttgtagggtttctctcctgtatgaattctctgatgaatcctcagactg
cctttgaaagtaaagcatttttcacattcactgcatttgtaaggtttctc
tcctgtatgaattctctgatgaatcctcaaactgaattttttagtaaagg
atttgtcacattcactgcatttgtaaggtttctctcctgtatgaattctc
tgatgaattctcagatggccattttcagtaaaggatttgtcacatcgact
acatttgtaaggtttctcacctgtatgatttctctgatgaattctcagat
ggccattttcagtaaaggatttgtcacattgactacatttgtaaggtttc
tctcctgtatgaattctctgatgaatattaagatgggatttttgggtaaa
gcatttgtcacattcactgcatttgtaaggtttatctcctgtatgaatcc
tctgatgaattctcagattgcctttttcagtaaagcatttctcacataca
atgcatttgtaaggtttctctcctgtatgaattctctgatgaatattaag
atgagatttttgggtaaagcatttgtcacattcactacatttgtaaaggt
ttctctcctgtatgaattctctgatgaatattaaagatgaaatttgtggt
aaagcatttgtcacattcactacatttataaattttctcttctgcatgaa
ttcctgatggaatactagatcgatctgatggtaaagcatttgtcacttta
ctacttctgtaatgtttctttcatgataatctctgcctgaccttggaagt
ttgtcttctctggctagaaatttgttcaaattactactgtaagttacagt
cagtattaattcggttacacagtgaccattaggtttagga
gaattcatacagtagagaaaacttacaaaaatgcagtgaatgtgataaat
gctttactaataaaggcagactgagaattaatcagataatttatacattt
aaaaaaaccttacaagtattttgtatgtgataaatgcagtacccacaaca
tcagtctgacaaatcaacagatatttcaaacagtagagcaacattataaa
tgaaatgaatgagataatcctttaacaagaaatatcatcttaaaattcac
tggagaattcttccaaaagggaaacttttcaaatacattgacggtttgaa
tcctttattttggccaatctcttagaatgtaacagataatttatacaggc
aagaatcttaacaaatataatatatgctgaaatatctttgacttcatttc
agtgcagaaaaaatatgtaaaaaaattttttatgggaaaaatagttctcc
tggggaaatgtggcatatgttttacacgggtaatattcttttcaacagtc
agtgctctaaactagagaattattatgaatctgaaaacttttgaaaacct
tcatgcaatcttcaaatctaatgtcaactattatgctggcagtaactctg
aatatatgataatgaagaaacattttcattaaacttttacttgttcaccc
tcaaatattatatgatgaagtcaggtgtgaaagccagaagaatatgatgt
tgtgcaacaattcatggagatagaaatgatccattccagaaggaaactta
aagagtgtactatcgccttcaaaatgtctaataaaactggcagcattttg
tatatttaattcaaatgaagaaattgacacaaattatacttgatagagta
tttgacaaactgagccaccaagaatgcatgttcttaatcctataatacac
ctacagatgtgaagtgtgctttgagtatccagtattcattattcttatca
cgtcaatgtgacaaatgattttattggttttcacgtttcagatagtgact
gactatgagtcccttatgctctgtcaacatctcttcctcatgcctgtaaa
taaagctgaatatttttaacagctgactgctgtttcagtttgcactgata
tagatgaataaatgttgcatcatcgctggactatttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_145658575_145659720
seq2: B6Ng01-323C24.g_64_1200 (reverse)

seq1  GAAATAGTTCCAGCGATGATGCAACATTTATTCATCTAATTATCAGTGCA  50
      ||||||| ||||||||||||||||||||||||||||||  ||||||||||
seq2  GAAATAG-TCCAGCGATGATGCAACATTTATTCATCTA--TATCAGTGCA  47

seq1  AACTGAAAACAGCCAAGTCAACCTTGTT-AAAATATTCAGCTTTATTTAC  99
      ||||| |||||||  ||||| |  |||| |||||||||||||||||||||
seq2  AACTG-AAACAGC--AGTCAGC--TGTTAAAAATATTCAGCTTTATTTAC  92

seq1  AGGGCAATGAGGAAGGAGATGTTGACAGAGCATAAGGGACTCATAGTCAG  149
      |||   |||||||| |||||||||||||||||||||||||||||||||||
seq2  AGG--CATGAGGAA-GAGATGTTGACAGAGCATAAGGGACTCATAGTCAG  139

seq1  TCACTATCCTGAAACGTG-AAACCAAT-AAATCATTTGTCACATTGACGT  197
      ||||||| |||||||||| |||||||| ||||||||||||||||||||||
seq2  TCACTAT-CTGAAACGTGAAAACCAATAAAATCATTTGTCACATTGACGT  188

seq1  GATAAGAATAATGAATACTGGATACTCAAAGCACACTTCACATCTGTAGG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGAATAATGAATACTGGATACTCAAAGCACACTTCACATCTGTAGG  238

seq1  TGTATTATAGGATTAAGAACATGCATTCTTGGTGGCTCAGTTTGTCAAAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTATAGGATTAAGAACATGCATTCTTGGTGGCTCAGTTTGTCAAAT  288

seq1  ACTCTATCAAGTATAATTTGTGTCAATTTCTTCATTTGAATTAAATATAC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTATCAAGTATAATTTGTGTCAATTTCTTCATTTGAATTAAATATAC  338

seq1  AAAATGCTGCCAGTTTTATTAGACATTTTGAAGGCGATAGTACACTCTTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGCTGCCAGTTTTATTAGACATTTTGAAGGCGATAGTACACTCTTT  388

seq1  AAGTTTCCTTCTGGAATGGATCATTTCTATCTCCATGAATTGTTGCACAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTCCTTCTGGAATGGATCATTTCTATCTCCATGAATTGTTGCACAA  438

seq1  CATCATATTCTTCTGGCTTTCACACCTGACTTCATCATATAATATTTGAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATATTCTTCTGGCTTTCACACCTGACTTCATCATATAATATTTGAG  488

seq1  GGTGAACAAGTAAAAGTTTAATGAAAATGTTTCTTCATTATCATATATTC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAACAAGTAAAAGTTTAATGAAAATGTTTCTTCATTATCATATATTC  538

seq1  AGAGTTACTGCCAGCATAATAGTTGACATTAGATTTGAAGATTGCATGAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTACTGCCAGCATAATAGTTGACATTAGATTTGAAGATTGCATGAA  588

seq1  GGTTTTCAAAAGTTTTCAGATTCATAATAATTCTCTAGTTTAGAGCACTG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTCAAAAGTTTTCAGATTCATAATAATTCTCTAGTTTAGAGCACTG  638

seq1  ACTGTTGAAAAGAATATTACCCGTGTAAAACATATGCCACATTTCCCCAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTGAAAAGAATATTACCCGTGTAAAACATATGCCACATTTCCCCAG  688

seq1  GAGAACTATTTTTCCCATAAAAAATTTTTTTACATATTTTTTCTGCACTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACTATTTTTCCCATAAAAAATTTTTTTACATATTTTTTCTGCACTG  738

seq1  AAATGAAGTCAAAGATATTTCAGCATATATTATATTTGTTAAGATTCTTG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAAGTCAAAGATATTTCAGCATATATTATATTTGTTAAGATTCTTG  788

seq1  CCTGTATAAATTATCTGTTACATTCTAAGAGATTGGCCAAAATAAAGGAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTATAAATTATCTGTTACATTCTAAGAGATTGGCCAAAATAAAGGAT  838

seq1  TCAAACCGTCAATGTATTTGAAAAGTTTCCCTTTTGGAAGAATTCTCCAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACCGTCAATGTATTTGAAAAGTTTCCCTTTTGGAAGAATTCTCCAG  888

seq1  TGAATTTTAAGATGATATTTCTTGTTAAAGGATTATCTCATTCATTTCAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTTAAGATGATATTTCTTGTTAAAGGATTATCTCATTCATTTCAT  938

seq1  TTATAATGTTGCTCTACTGTTTGAAATATCTGTTGATTTGTCAGACTGAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATGTTGCTCTACTGTTTGAAATATCTGTTGATTTGTCAGACTGAT  988

seq1  GTTGTGGGTACTGCATTTATCACATACAAAATACTTGTAAGGTTTTTTTA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGGGTACTGCATTTATCACATACAAAATACTTGTAAGGTTTTTTTA  1038

seq1  AATGTATAAATTATCTGATTAATTCTCAGTCTGCCTTTATTAGTAAAGCA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTATAAATTATCTGATTAATTCTCAGTCTGCCTTTATTAGTAAAGCA  1088

seq1  TTTATCACATTCACTGCATTTTTGTAAGTTTTCTCTACTGTATGAATTC  1146
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCACATTCACTGCATTTTTGTAAGTTTTCTCTACTGTATGAATTC  1137