BAC Information

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BAC

Clone NameB6Ng01-323J17
Chromosome4 (Build37)
Map Location 72,796,783 - 72,797,810
singlet/doubletsinglet
Overlap genenone
Upstream geneTle1, Aldoa-ps2, EG384113, LOC667713, LOC100039698
Downstream geneOTTMUSG00000001246, LOC100039726, LOC667722, LOC623115, OTTMUSG00000000281, OTTMUSG00000000280, OTTMUSG00000000282, OTTMUSG00000000283, Gm428, Rasef, LOC667768, LOC545637, LOC623272, OTTMUSG00000014862, OTTMUSG00000004010, 2310002L09Rik, Frmd3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323J17.bB6Ng01-323J17.g
ACCGA112141GA112142
length9981,013
definitionB6Ng01-323J17.b B6Ng01-323J17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatactgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
ttcatctcacaccagtcagaatggctaagatcaaaaattcaggtgacaac
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaagcttatacaaccactctggaaatcagtctggtggttcctca
gaaaattggacatagtactactggaggatcccgcaatacctttcctgggc
atacatccagaagatgtcccaactggtaagaaggacacatgatccactat
gttcatagcagctttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaaag
gagtactactcagctattaaaatgaatgaatttatgaaattcccaggcaa
atggttggacctggagggcatcatcccatgtcagttaacacaatcacaaa
agaactcaaatgatatgtactcactgataagtggattttagcccagaaac
ttagtatagggagatataagatacaatttgcaaaacacatgaaactatag
atgtatcattttctttaactgagctttctatttcttctaacttgttttta
acacctaaattttttctccatatattttattcagttgatgatgcaaaaca
ctgtcatatgagtggtttttacttttaaatttatctcaattttctttact
gattattttttacttttatgtctttaactgtttctattattttattgaac
tatttgtgttttctcagtcttctgtaagagattttttttcatatactcat
taagtttcttgtacttaagtttgtttgtacatagtcataattgctatttt
gttgttcatgtctatagcttcagttaatattatatttctctatattta
gaattctctctccattagtgattattaaggccacatattttatataggct
tgttctatctatctgtgtgtgtatgtgcactcatttgcacatgttagaga
gacagaggcaaagacagagagttggaaatacagagagacagaaagagaga
aagagagagagaagcacaactgacagagacaggtgcccaaactaagtttt
actactttgcgacactgtattttaataagtggtctgataccatagcacag
tctcaccaaattcagtacagaatctaaagcatgccaatatcaagactatc
aattctggccctggttcatacatttattccaaccagttgagacactgtta
ttcacagacatctcattaaggtgcacacagaccccaaaacccactggaac
tgaacattttaagctactaagttttgatggtcttttttttatacaacagt
gaacaaccacaactaacacatgggactcttaagatgtgaaaggataaatt
gaaagtgatatagccgtacaataaaatgcctcttagcaataaaagtaaca
gacttgttacatggtagcagccagaaaacagaaaaattagggctggaaca
gaggctaggatgaaacacttaaagcccattccctaaagtgaacaaagtcc
cactttgttcacctatacacattcacaaaaatttctttatacaattaatt
agcaagaaagtattcagacacatcagcctggaaaggacattttatattta
atccataacattctaccttttgacctcatagactcatggtcacctcacaa
tataaaatagctttagttacacatcaaaagtatgcatagtcttataattc
taatattgttcaaatggccaaagggtcaaagtctgttcttggtctcaagg
caatctttttatctgtgagcatttgtaaataatataatatatataatata
aatatatatatatatataaattcagttacatgctttataaaatgtctcat
tccaaaaagaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_72796783_72797810
seq2: B6Ng01-323J17.g_65_1077

seq1  GAATTCTCTCTCCATTAGTGATTATTAAGGCCACATATTTTATATAGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTCCATTAGTGATTATTAAGGCCACATATTTTATATAGGCT  50

seq1  TGTTCTATCTATCTGTGTGTGTATGTGCACTCATTTGCACATGTTAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTATCTATCTGTGTGTGTATGTGCACTCATTTGCACATGTTAGAGA  100

seq1  GACAGAGGCAAAGACAGAGAGTTGGAAATACAGAGAGACAGAAAGAGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGGCAAAGACAGAGAGTTGGAAATACAGAGAGACAGAAAGAGAGA  150

seq1  AAGAGAGAGAGAAGCACAACTGACAGAGACAGGTGCCCAAACTAAGTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGAGAGAAGCACAACTGACAGAGACAGGTGCCCAAACTAAGTTTT  200

seq1  ACTACTTTGCGACACTGTATTTTAATAAGTGGTCTGATACCATAGCACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTTTGCGACACTGTATTTTAATAAGTGGTCTGATACCATAGCACAG  250

seq1  TCTCACCAAATTCAGTACAGAATCTAAAGCATGCCAATATCAAGACTATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACCAAATTCAGTACAGAATCTAAAGCATGCCAATATCAAGACTATC  300

seq1  AATTCTGGCCCTGGTTCATACATTTATTCCAACCAGTTGAGACACTGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGGCCCTGGTTCATACATTTATTCCAACCAGTTGAGACACTGTTA  350

seq1  TTCACAGACATCTCATTAAGGTGCACACAGACCCCAAAACCCACTGGAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAGACATCTCATTAAGGTGCACACAGACCCCAAAACCCACTGGAAC  400

seq1  TGAACATTTTAAGCTACTAAGTTTTGATGGTCTTTTTTTTATACAACAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACATTTTAAGCTACTAAGTTTTGATGGTCTTTTTTTTATACAACAGT  450

seq1  GAACAACCACAACTAACACATGGGACTCTTAAGATGTGAAAGGATAAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAACCACAACTAACACATGGGACTCTTAAGATGTGAAAGGATAAATT  500

seq1  GAAAGTGATATAGCCGTACAATAAAATGCCTCTTAGCAATAAAAGTAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTGATATAGCCGTACAATAAAATGCCTCTTAGCAATAAAAGTAACA  550

seq1  GACTTGTTACATGGTAGCAGCCAGAAAACAGAAAAATTAGGGCTGGAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGTTACATGGTAGCAGCCAGAAAACAGAAAAATTAGGGCTGGAACA  600

seq1  GAGGCTAGGATGAAACACTTAAAGCCCATTCCCTAAAGTGAACAAAGTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTAGGATGAAACACTTAAAGCCCATTCCCTAAAGTGAACAAAGTCC  650

seq1  CACTTTGTTCACCTATACACATTCACAAAAATTTCTTTATACAATTAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTGTTCACCTATACACATTCACAAAAATTTCTTTATACAATTAATT  700

seq1  AGCAAGAAAGTATTCAGACACATCAGCCTGGAAAGGACATTTTATATTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGAAAGTATTCAGACACATCAGCCTGGAAAGGACATTTTATATTTA  750

seq1  ATCCATAACATTCTACCTTTTGACCTCATAGACTCATGGTCACCTCACAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATAACATTCTACCTTTTGACCTCATAGACTCATGGTCACCTCACAA  800

seq1  TATAAAATAGCTTTAGTTACACATCAAAAGTATGCATAGTCTTATAATTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAATAGCTTTAGTTACACATCAAAAGTATGCATAGTCTTATAATTC  850

seq1  TAATATTGTTCAAATGGCC-AAGGGTCAAAGTCTGTTCTTGGTCTCAAGG  899
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TAATATTGTTCAAATGGCCAAAGGGTCAAAGTCTGTTCTTGGTCTCAAGG  900

seq1  CAATC-TTTTATCTGTGAGCATTTGTAAAATAATAATAATATA-ATAATA  947
      ||||| |||||||||||||||||||| ||||||| |||||||| ||||||
seq2  CAATCTTTTTATCTGTGAGCATTTGT-AAATAAT-ATAATATATATAATA  948

seq1  ATAATAAATAATAATAATAATAATAATAATAAATATCAAGTTACATGCTT  997
        |||| |||            |||   |||||| || ||||||||||||
seq2  TAAATATATA-----------TATATATATAAAT-TC-AGTTACATGCTT  985

seq1  TTAATAAAATGTTCTCATTCCAAAAAGAAGA  1028
      |  |||||||| |||||||||||||||||||
seq2  T--ATAAAATG-TCTCATTCCAAAAAGAAGA  1013