BAC Information

Click to search

BAC

Clone NameB6Ng01-323P12
Chromosome4 (Build37)
Map Location 146,355,718 - 146,356,831
singlet/doubletsinglet
Overlap genenone
Upstream gene1700029I01Rik, LOC236069, LOC384084, LOC666386, LOC666390, LOC100041433, LOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498
Downstream geneLOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323P12.bB6Ng01-323P12.g
ACCGA112407GA112408
length1,1121,152
definitionB6Ng01-323P12.b B6Ng01-323P12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcttgaaatttcacatcaaggtctgaatgattcaaagatgaaa
taaatacaacaccagtacagacaatgctaaaccacatttatatatatata
tatatatatatatatatatatatatatatatatatatgtatatatatata
tatatatatatatatatatatatatatatatatatatatatatatatata
tatatatatatatatatatatagatatagatatatatatccttccacctc
cctagattctcatagttatatcacaacacctgatatggaaatccctgtca
cctgacctaaatgacacacatcaaaagaaaattgagagactgtagctaaa
gcaatttgacaatgttaataaaatttccctaacctaaatcactaatccaa
taccaattctcatgacaaaatgaattatgaaacaaactcaagaggcaaaa
gtcaaaatataatctgaacaccattcaatatggacaaatgtcataaagag
ggaacaagcacaggaattcaaagaaggcagaaacaaacttaatgaaattc
cagagaattcctacaagtgggtaagagaattatcatacatatgctggatg
tgaacatcttatccagagatataatttactggtttgaattaaggtcagcc
tacaaaagaaatacaggcacggcactggaaactcaggccgaaagagtgaa
tttataactgacatctgctatatgtagaaatatggaaaatacatttatat
tgttggtgctttcagcctaagtcagacaaacatgaattgtagagggaaac
tgccaattcagagagagctgaataaaagcccagcagtggggaaagggcaa
cactgtaaaagaaggaggaagtggagttatggaaaacccatgctgtcatt
taccatggaacatggaaatatgaatatatgacgagcatggatacccatcc
aaaaccttcctcagacaatacatgaaacacaaagtaggatgaaaccattg
aattatcaagggatggggcaggatagaagagaaatggtaactatgtaagc
acctgggactcttcatgtgggaggccatttcctcttgcaaacgccaggcc
cctaggagattt
gaattcatcagagaaatcatacaggtgagaaaccttacaaatgtagtcaa
tgtgacaaatcctttactgaaaatggccatctgagaattcatcagagaat
tcatacaggagagaaaccttacaaatgcagtgaatgtgacaaatgcttta
ctaaaaaattcagtttgaggattcatcagagaattcatacaggagagaaa
ccttacaaatgcactgaatgtgacaaatgctttactttcaaaggcagtct
gaggattcatcagagaattcatacaggagagaaaccctacaaatgtagtg
aatgtgacaaatcctttactgaaaatggctgtttgagaattcatcagaga
attcatacaggagagaaaccttacaaatgcactgaatgtgacaaatgctt
tactttcaaaggcagtctgaggattcatcagagaattcatacaggagaga
aaccttacaaatgcactgaatgtgacaaatcctttactgaaaagggcaaa
ctgagaattcatcagagaattcatacaggagagaaaccttacaaatgtag
tgaatgtgacaaatgctttactgaataaggacatcagagaattcatacag
gagagataccttacaaatagtttgtatgtgacaaatacaatacaatgtca
gtctgagaaatcatcagtttttaatacagtagagaatatttataaatgaa
gtgaacgagacaatcctttaccaagatatatcatcttaaaaatcattaga
gaatacttacagaagagaaacttttcaattatattgaaggtatgaatcct
ttactcttggcctatttcctagaatgttaacagtgaatacttacaggata
caaacttaactcatgcattgtatgaagaaatattttttgacttcatttca
gtcaaagagaatatctaataactttttagggaaagtatttctgttgggga
aagtgtggcctgtgttttattcatgttctatctgtcaattgagctcacac
tagagattagtatgattatgaaatcatgtgaaactttcatgcaatgtcaa
tctaatatgtcacctattttttggctggaagaaactctgaatgtaaaatg
tagaagctttcatgaacgcttttacctgtcaccttgaatggttacaagat
ga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146355718_146356831
seq2: B6Ng01-323P12.b_50_1161 (reverse)

seq1  AAATCTCCTAGTG--CTTGCGTTTTCAGGTG--AATGGCCTTCCCACATG  46
      ||||||||||| |  || |||||| || | |  ||||||| |||||||||
seq2  AAATCTCCTAGGGGCCTGGCGTTTGCAAGAGGAAATGGCC-TCCCACATG  49

seq1  AAGTGTCCCAGAGTGCTTACATAGTTACCA--TCTCTTCTATCCCTGCCC  94
      ||| ||||||| ||||||||||||||||||  |||||||||| |||||||
seq2  AAGAGTCCCAG-GTGCTTACATAGTTACCATTTCTCTTCTAT-CCTGCCC  97

seq1  CATCCCTTG-TTATTC-ATGTTTTCATCCTATCCTTGTGTTTCATGTATG  142
      ||||||||| | |||| ||| |||||||||| | ||||||||||||||| 
seq2  CATCCCTTGATAATTCAATGGTTTCATCCTA-CTTTGTGTTTCATGTATT  146

seq1  TTCTGAGGAAGGTTTTGGATGGGTATCCATGCT-GTCATATATTCATAAT  191
       |||||||||||||||||||||||||||||||| |||||||||||||| |
seq2  GTCTGAGGAAGGTTTTGGATGGGTATCCATGCTCGTCATATATTCATATT  196

seq1  TCCATGTTCCATGGTAAATGACAGCATGGG-TTTCCATAACTCCACTTCC  240
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TCCATGTTCCATGGTAAATGACAGCATGGGTTTTCCATAACTCCACTTCC  246

seq1  TCCTTCTTTTACAGTGTTGCCTTTTCCCCACTGCTGGCTTTTTATTCAGC  290
      ||||||||||||||||||||| |||||||||||||||  |||||||||||
seq2  TCCTTCTTTTACAGTGTTGCCCTTTCCCCACTGCTGGGCTTTTATTCAGC  296

seq1  TCTCTCTGAATTGGCAGTTTCCCTCTACAATTCATGTTTGTCTGACTTAG  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTGAATTGGCAGTTTCCCTCTACAATTCATGTTTGTCTGACTTAG  346

seq1  GCTGAAAGCACCAACAATTTAAATACA-TTTCCATATTTCTACATATAGC  389
      |||||||||||||||||| |||||  | ||||||||||||||||||||||
seq2  GCTGAAAGCACCAACAATATAAATGTATTTTCCATATTTCTACATATAGC  396

seq1  AGTATGTCAGTTATAAATTCACTCTTTCGGCCTGAGCTTCCAGTGCCGTG  439
      || ||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AG-ATGTCAGTTATAAATTCACTCTTTCGGCCTGAGTTTCCAGTGCCGTG  445

seq1  TCTGTATTTCTTTTGTAGGCTGACCTTAATTCAAACCAGTAAATTATATC  489
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTATTTCTTTTGTAGGCTGACCTTAATTCAAACCAGTAAATTATATC  495

seq1  TTTGGATAAGATGTTTACATCCAGCATATGTATGATAATTCTCTTACCCA  539
      | ||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TCTGGATAAGATGTTCACATCCAGCATATGTATGATAATTCTCTTACCCA  545

seq1  CTTGTAGGAATTCTCTGGAATTTCATTAAGTTTGTTTCTGCCTTCTTTGA  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTAGGAATTCTCTGGAATTTCATTAAGTTTGTTTCTGCCTTCTTTGA  595

seq1  ATTCCTGTGCTTGTTCCCTCTTTATGACATTTGTCCACATTGAATGGTGT  639
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ATTCCTGTGCTTGTTCCCTCTTTATGACATTTGTCCATATTGAATGGTGT  645

seq1  TCAGATTATATTTTGACTTTTGCCTCTTGAGTTTGTTTCATAATTCATTT  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATTATATTTTGACTTTTGCCTCTTGAGTTTGTTTCATAATTCATTT  695

seq1  TGTCATGAGAATTGGTATTGGATTAGTGATTTAGGTTAGGGAAATTTTAT  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATGAGAATTGGTATTGGATTAGTGATTTAGGTTAGGGAAATTTTAT  745

seq1  TAACATTGTCAAATTGCTTTAGCTACAGTCTCTCAATTTTCTTTTGCTGT  789
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TAACATTGTCAAATTGCTTTAGCTACAGTCTCTCAATTTTCTTTTGATGT  795

seq1  GTGTCATTTAGGTCAGGTGACAGGGATTTCCATATCAGGTGTTGTGAATA  839
      |||||||||||||||||||||||||||||||||||||||||||||||   
seq2  GTGTCATTTAGGTCAGGTGACAGGGATTTCCATATCAGGTGTTGTGATAT  845

seq1  AACTTTGAGAATCTAGGGTGGTGGAAGGAACTAGGTTACAGTTACAGTCT  889
      |||| ||||||||||||| ||||||||||  ||   || |  || | |||
seq2  AACTATGAGAATCTAGGGAGGTGGAAGGATATA---TATATCTATA-TCT  891

seq1  AAATATAT-TACTTACTTTCGTGACTGTACATTGTCAAGATTCCTCATAT  938
      | |||||| ||  ||  |   |   | || ||     | ||     ||||
seq2  ATATATATATATATATATATATATATATATAT-----ATAT-----ATAT  931

seq1  CATTTTGTTTTTA-ATGTTTATATATATACATGTGTGTGTATATATATA-  986
         | | | | || || | |||||||||| || | | | |||| ||||| 
seq2  ATATATATATATATATATATATATATATATATATATATATATACATATAT  981

seq1  ATATATA-GTATAT-TATATATAT-TATATATATATATATATAAATGTGG  1033
      |||||||  ||||| ||||||||| |||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATATATATATATATATATATAAATGTGG  1031

seq1  TTTAGCATTGTCTGTAATGGTGTTATATTTATTTCATCTTTGAATCATTC  1083
      |||||||||||||||| ||||||| |||||||||||||||||||||||||
seq2  TTTAGCATTGTCTGTACTGGTGTTGTATTTATTTCATCTTTGAATCATTC  1081

seq1  AGACCTTGATGTGAAATTTCAAGAAGAATTC  1114
      |||||||||||||||||||||||||||||||
seq2  AGACCTTGATGTGAAATTTCAAGAAGAATTC  1112