BAC Information

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BAC

Clone NameB6Ng01-324C10
Chromosome4 (Build37)
Map Location 62,110,031 - 62,275,684
singlet/doubletdoublet
Overlap geneWdr31, Bspry, Hdhd3, Alad, Pole3, 4933430I17Rik, Rgs3
Upstream geneLOC100039019, LOC100039177, LOC621093, LOC100039206, LOC621127, LOC100039228, LOC384021, LOC100039247, LOC667278, Mup5, LOC435785, LOC667295, LOC100039305, LOC546832, OTTMUSG00000007485, Mup3, LOC100039345, OTTMUSG00000000231, Zfp37, Slc31a2, Fkbp15, Slc31a1, Cdc26, Prpf4, Rnf183
Downstream geneZfp618, Ambp, Kif12, Col27a1, Orm1, Orm-ps, Orm3, Orm2, Akna, Whrn, Atp6v1g1, 6330416G13Rik, LOC670833, 1700018C11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324C10.bB6Ng01-324C10.g
ACCGA112542GA112543
length1,1351,134
definitionB6Ng01-324C10.b B6Ng01-324C10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,110,031 - 62,110,693)(62,274,553 - 62,275,684)
sequence
gaattcttcatctgcttcagagctactaagagctggctccccgagcccat
ccagcgatgagcacaggctccttttcctagagacctccgctaattgatct
ttcttcttttccctttttcctctttttcttctaatctctctccaggtatt
cctacctaaccttaacttttcctcgggttcaagacccttggaaaggcctg
tatacttattttgtgtaccatattttctctttgctcctactctctctccc
cgctttacttctgatagcttgtcctgaatttcctctagaattttcagccc
tatcttaatcacttgataacatgtgaaaaggaacaaaagggctcctaaca
ccagaaaaaattcaaggccaaacatattccactttacttctgatagactg
tcttgaatttccttagaaagttcaagatcagacttacctcgtaaagctgt
actcactggtactctcgttccccagctgaaaagttctgaattcatacagt
tgaatccttcttaacagtctgctttacgggaacctttattaccgcgaccc
gcagttctggtcctggaatgagggatcttccttgcgccagtcccgagttt
tttctcgtcccggaattcggcaccaattgttattagacgcgttctcacgc
ccggccaggaagaacaccacagaccagaatcttctgcggcaaagctttat
tgcttacatcttcaggagccagagtgcaagaagcaagagagagagaaaac
gaaaccccgtccctattaaggagaattttccttcgcctaggacgtgtcac
tccctgattggctgcagcccatcggccgagttgacgtcacgaggaaggca
gagcacatggagtgaagaaccaccctcggcacatgcgcagattatttgtt
taccacttagaacacagctgtcagcgccatcttgtaacggcgaatgtggg
cgcggctcccaacattccacagtgaagtgtcgctacgtgtggcattccgt
tgtctgtttccttacgtaagggtaaaacatgggcaatatttcccatgacc
tcattttaaacaagctgcatcattttagtcacaaaaagtcagccaaattg
ctaaaggtgattttccagaatgcaggtggggtgga
gaattcaaagtgcctagagaatgtccaaccatcacgaactgattggcagc
ttttaatagcgatgccatcgatgaatgccaatgaaatgccaacacttgtt
ggcgtatgccaacctgaaatttcatggaaaacagagccacaaaagagaaa
caatggctgtgtctggtaggtgggattgttagcgatttttgctttcaaat
catcataggggaacagccactgcttttgcaatggtatttttaaggacctc
tgttgtaccacactctacttgagcttgatacttgagccttttgtgagttt
tgattctgctttgtttttcttcccttcctttctttctctagctctcaact
cagatttctttgtagactggtttaattactatctagaaacagcatacgta
tttagactggagcatagccctggcagcctagttctcactatctgagagac
ccacggagagcatctggcctgccccgattggcagggggagttggtaaaac
tccctgcagatgtacctcccaggaagccagtcttcaggggtcaggcccag
gaggcagttctcagcagcctcaaagggctgcctacaaaacctgccttgag
actttgagctgcagagttcgtgcctagatccaaacgcagttagttcaagg
tagcgtctgggcatgggagcacagggaaagctctccagggattctacacg
tacccacccatggtcaaggcgaggtcgagaagcttccataaatacatatt
gtttggattctccggaaagggtggcagcttgccacctgatagttgtaagc
acaacaaaactagcttctcccaggcacccaagccaagtgaggggcagggc
atggagcactgccacctgccctgtcaatccatgttctgaaccatagccac
ggctatctcactccatggcatcattggctgcttctctagcagtgactcgt
gggctacctccttctccttgtccccgtcatacaaggcccattaatgattg
cttcaaggagggtaatgcagtcacccctaactaagtacccctttcacctc
ctaaccctgcgtctgaaccactcttccctcttggaagcaagctaagactg
ccacgcagaccggacatcagatagctgcaattca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_62110031_62110693
seq2: B6Ng01-324C10.b_515_1183

seq1  GTTCCCCAGCTGAAAAGTTCTGAATTCATACAGTTGAATCCTTCTTAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCCAGCTGAAAAGTTCTGAATTCATACAGTTGAATCCTTCTTAACA  50

seq1  GTCTGCTTTACGGGAACCTTTATTACCGCGACCCGCAGTTCTGGTCCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCTTTACGGGAACCTTTATTACCGCGACCCGCAGTTCTGGTCCTGG  100

seq1  AATGAGGGATCTTCCTTGCGCCAGTCCCGAGTTTTTTCTCGTCCCGGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGGGATCTTCCTTGCGCCAGTCCCGAGTTTTTTCTCGTCCCGGAAT  150

seq1  TCGGCACCAATTGTTATTAGACGCGTTCTCACGCCCGGCCAGGAAGAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGCACCAATTGTTATTAGACGCGTTCTCACGCCCGGCCAGGAAGAACA  200

seq1  CCACAGACCAGAATCTTCTGCGGCAAAGCTTTATTGCTTACATCTTCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGACCAGAATCTTCTGCGGCAAAGCTTTATTGCTTACATCTTCAGG  250

seq1  AGCCAGAGTGCAAGAAGCAAGAGAGAGAGAAAACGAAACCCCGTCCCTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGAGTGCAAGAAGCAAGAGAGAGAGAAAACGAAACCCCGTCCCTAT  300

seq1  TAAGGAGAATTTTCCTTCGCCTAGGACGTGTCACTCCCTGATTGGCTGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAGAATTTTCCTTCGCCTAGGACGTGTCACTCCCTGATTGGCTGCA  350

seq1  GCCCATCGGCCGAGTTGACGTCACGAGGAAGGCAGAGCACATGGAGTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATCGGCCGAGTTGACGTCACGAGGAAGGCAGAGCACATGGAGTGAA  400

seq1  GAACCACCCTCGGCACATGCGCAGATTATTTGTTTACCACTTAGAACACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCACCCTCGGCACATGCGCAGATTATTTGTTTACCACTTAGAACACA  450

seq1  GCTGTCAGCGCCATCTTGTAACGGCGAATGTGGGCGCGGCTCCCAACATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCAGCGCCATCTTGTAACGGCGAATGTGGGCGCGGCTCCCAACATT  500

seq1  CCACAGTGAAGTGTCGCTACGTGTGGCATTCCGTTGTCTGTTT-CTTACG  549
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CCACAGTGAAGTGTCGCTACGTGTGGCATTCCGTTGTCTGTTTCCTTACG  550

seq1  T-AGGGTAAAACATGGGCAATATTCCCCATGACCTCATTTTAAAC-AGCT  597
      | |||||||||||||||||||||| |||||||||||||||||||| ||||
seq2  TAAGGGTAAAACATGGGCAATATTTCCCATGACCTCATTTTAAACAAGCT  600

seq1  GCATTCATTTTAGTCAC-AAAAGTCAGCC-AATTGCTAAAAGGTGA-TTT  644
      ||| ||||||||||||| ||||||||||| ||||||| |||||||| |||
seq2  GCA-TCATTTTAGTCACAAAAAGTCAGCCAAATTGCT-AAAGGTGATTTT  648

seq1  CCAG-ATG-AAGTGGGGTGGA  663
      |||| ||| | ||||||||||
seq2  CCAGAATGCAGGTGGGGTGGA  669

seq1: chr4_62274553_62275684
seq2: B6Ng01-324C10.g_68_1201 (reverse)

seq1  TGAATGGCAGCTATCTGGATGTCTG--CTGCCGTGGCAGTC-TAGCCTGC  47
      ||||| |||||||||| |||||| |  ||| |||||||||| |||| |||
seq2  TGAATTGCAGCTATCT-GATGTCCGGTCTG-CGTGGCAGTCTTAGCTTGC  48

seq1  TTCCAAGAGGGAAGAGT-GTTCAGAACGGCAGGGTAGGAAGGTG-AAGGG  95
      ||||||||||||||||| |||||||   |||||||  | ||||| |||||
seq2  TTCCAAGAGGGAAGAGTGGTTCAGA--CGCAGGGTTAGGAGGTGAAAGGG  96

seq1  GTACTTAGTTA-GGGTGACTGCATTACCCTCCTTGAGCAAATCATTAATG  144
      ||||||||||| ||||||||||||||||||||||||   |||||||||| 
seq2  GTACTTAGTTAGGGGTGACTGCATTACCCTCCTTGAAGCAATCATTAAT-  145

seq1  GGGCCTTGTATGACGGGGACAAGGAGAAGGAGGTAG-CCACGAGTCACTG  193
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GGGCCTTGTATGACGGGGACAAGGAGAAGGAGGTAGCCCACGAGTCACTG  195

seq1  CTAGAGAAGCAGCCAATGATGCCATGGAGTGAGATAGCCGTGGCTATGGT  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGAAGCAGCCAATGATGCCATGGAGTGAGATAGCCGTGGCTATGGT  245

seq1  TCAGAACATGGATTGACA-GGCAGGTGGCAGTGCTCCATGCCCCTGCCCC  292
      |||||||||||||||||| ||||||||||||||||||||| |||||||||
seq2  TCAGAACATGGATTGACAGGGCAGGTGGCAGTGCTCCATG-CCCTGCCCC  294

seq1  TCACTTGGCTTGGGTGCCTGGGAGAAGCTAGTTTTGTTGTGCTTACAACT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTGGCTTGGGTGCCTGGGAGAAGCTAGTTTTGTTGTGCTTACAACT  344

seq1  ATCAGGTGGCAAGCTGCCACCCTTTCCGGAGAATCCAAACAATATGTATT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGTGGCAAGCTGCCACCCTTTCCGGAGAATCCAAACAATATGTATT  394

seq1  TATGGAAGCTTCTCGACCTCGCCTTGACCATGGGTGGGTACGTGTAGAAT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAAGCTTCTCGACCTCGCCTTGACCATGGGTGGGTACGTGTAGAAT  444

seq1  CCCTGGAGAGCTTTCCCTGTGCTCCCATGCCCAGACGCTACCTTGAACTA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGAGAGCTTTCCCTGTGCTCCCATGCCCAGACGCTACCTTGAACTA  494

seq1  ACTGCGTTTGGATCTAGGCACGAACTCTGCAGCTCAAAGTCTCAAGGCAG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCGTTTGGATCTAGGCACGAACTCTGCAGCTCAAAGTCTCAAGGCAG  544

seq1  GTTTTGTAGGCAGCCCTTTGAGGCTGCTGAGAACTGCCTCCTGGGCCTGA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTAGGCAGCCCTTTGAGGCTGCTGAGAACTGCCTCCTGGGCCTGA  594

seq1  CCCCTGAAGACTGGCTTCCTGGGAGGTACATCTGCAGGGAGTTTTACCAA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGAAGACTGGCTTCCTGGGAGGTACATCTGCAGGGAGTTTTACCAA  644

seq1  CTCCCCCTGCCAATCGGGGCAGGCCAGATGCTCTCCGTGGGTCTCTCAGA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCCTGCCAATCGGGGCAGGCCAGATGCTCTCCGTGGGTCTCTCAGA  694

seq1  TAGTGAGAACTAGGCTGCCAGGGCTATGCTCCAGTCTAAATACGTATGCT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGAGAACTAGGCTGCCAGGGCTATGCTCCAGTCTAAATACGTATGCT  744

seq1  GTTTCTAGATAGTAATTAAACCAGTCTACAAAGAAATCTGAGTTGAGAGC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTAGATAGTAATTAAACCAGTCTACAAAGAAATCTGAGTTGAGAGC  794

seq1  TAGAGAAAGAAAGGAAGGGAAGAAAAACAAAGCAGAATCAAAACTCACAA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAAAGAAAGGAAGGGAAGAAAAACAAAGCAGAATCAAAACTCACAA  844

seq1  AAGGCTCAAGTATCAAGCTCAAGTAGAGTGTGGTACAACAGAGGTCCTTA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTCAAGTATCAAGCTCAAGTAGAGTGTGGTACAACAGAGGTCCTTA  894

seq1  AAAATACCATTGCAAAAGCAGTGGCTGTTCCCCTATGATGATTTGAAAGC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACCATTGCAAAAGCAGTGGCTGTTCCCCTATGATGATTTGAAAGC  944

seq1  AAAAATCGCTAACAATCCCACCTACCAGACACAGCCATTGTTTCTCTTTT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCGCTAACAATCCCACCTACCAGACACAGCCATTGTTTCTCTTTT  994

seq1  GTGGCTCTGTTTTCCATGAAATTTCAGGTTGGCATACGCCAACAAGTGTT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTCTGTTTTCCATGAAATTTCAGGTTGGCATACGCCAACAAGTGTT  1044

seq1  GGCATTTCATTGGCATTCATCGATGGCATCGCTATTAAAAGCTGCCAATC  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTTCATTGGCATTCATCGATGGCATCGCTATTAAAAGCTGCCAATC  1094

seq1  AGTTCGTGATGGTTGGACATTCTCTAGGCACTTTGAATTC  1132
      ||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCGTGATGGTTGGACATTCTCTAGGCACTTTGAATTC  1134