BAC Information

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BAC

Clone NameB6Ng01-324F23
Chromosome4 (Build37)
Map Location 146,017,646 - 146,018,787
singlet/doubletsinglet
Overlap genenone
Upstream gene9230115A19Rik, LOC195576, LOC622846, LOC666314, LOC545701, OTTMUSG00000010965, LOC666334, LOC545703, LOC384081, LOC100041379, LOC666349, LOC666351, LOC545704, 1700029I01Rik, LOC236069, LOC384084, LOC666386, LOC666390, LOC100041433, LOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093
Downstream geneOTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324F23.bB6Ng01-324F23.g
ACCGA112703GA112704
length8391,148
definitionB6Ng01-324F23.b B6Ng01-324F23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccctttagtgtatgaggaaaaatccaagtagttcattttatgaac
tgaagtcacttgtttttagggtatctgttgttaataactccaagaaatta
ctgcatgctttttaccaacgttcatgttgtttccatagtgaggcaatctc
tgcatttataaatggtaccatgatttcagctggatccattccaattaatt
tttgaagtctcttttttttttatttttaataacaattcagagactatctc
catgtaggcttttaatttcttaccctgtttatgtgctaaaaatatccatt
ctaatatataatcttccatctgcatgagcattcctgttggggaatgagta
gaaggtaagataactaagatgcaggccgttttggaacaatatgaactagt
tgtatgtcttgcaattaattacctttctaccagagctaaggccttctcag
tcttggctggtaattttctcaggctatttatatcttttatcaccttgtaa
ggtttgaaataaattgcttagcacttgattggccaagccaattgtaggcc
acagccagttagtatctcccaataatttctgaaaatcattaagagtcctc
aaatggtctttcctgatttgcaccttttgtgacctgttgcagacttattc
taggtaatagaccattaatagaagccactcattgtatttttttcaggggt
gatttgcaatcttcagcaacgcaagttattcgggtgtttgtttgggtggt
tgttttttttgctgttgttgtttttttgggtttttttcatcaaacattct
ttccatcgatatttaaatcttatatttgcatacagattt
gaattcaagagttatttctgaggctctgaaggcatctacatatttccttt
tttgagcctttttatcttaacctagtaatactagcctggaacactgaact
gaatcttccctattttagttaacacaaatcaccatatctaatacagtgtt
tctaattttttaatgctaaacactgacatagaattcaaattattctttgg
tgggcagactacccaacagttcaatgaatgatttctcagttctaaaacaa
taggaaatatgtgctttcctacgcttttaagcaaccactgtgaaagggtc
tttacaccccaaagggattgttatcaatcagttgaaaaataactactatt
aactttatgatacagccttgcaaaaatattcctgacttcaacgtatgttt
tctgtgaggcatttcctgggaatatgcaacatatattcatctgagtatcc
caagtgcaagttgaaaacaaccaaagcaaacatgtagaaatttcagcttt
attggagttagttacaggacaataggaaaggacttgttgaccagatcaca
agagactcagagtcacttgttatcctataatgtgaaacaagcatttgaga
agaattatgattaatggatactcgaagcatacttcacatctgtaagcata
cttataggataaagaatatgctgactgggtggctcagttagccagatact
cttttaagtataatttttctgaattggctcatttgaattaaatatacaga
gtgttaccagttttattagatattttgagggttttattaaagaccttaaa
tagttcccttttgaaatggattacttctgtctcaatgaaagtgttacaca
atactatcttctgacttcccaacttgtcttcatcttgtaacatttgagga
tgaacaagtaaaaaggtgtcatgaaaagctttctacatttccacatgttc
agagtttctcacagcataaatagttgacattatctaagatttgaacatta
catgaaagttttcacaagattttcatatcacacttaattctctagtggtg
gaagcttcaagtgttgcaggaacactggtgaataaaaacatatgccaaca
ttttcccaacagaaaattacctttcctttgaagttccttagatgtttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146017646_146018787
seq2: B6Ng01-324F23.g_65_1212 (reverse)

seq1  AAAACATCT-AGGAACTTTTTAAGGGAAAGTA--TTTCTGTTGGGAAAAA  47
      ||||||||| |||||| ||  |||| || |||  ||||||||||||||| 
seq2  AAAACATCTAAGGAAC-TTCAAAGGAAAGGTAATTTTCTGTTGGGAAAAT  49

seq1  TGTGGCATATG-TTTTATTCA-CAGTGTCCTGGCAACACTTGAGGC-TCC  94
        ||||||||| ||||||||| |||||| |  ||||||||||| || |||
seq2  GTTGGCATATGTTTTTATTCACCAGTGTTCCTGCAACACTTGAAGCTTCC  99

seq1  A-CACTAGAGAATT-AGTGTGATTATGAAAATCTTGTGAAAACTTTCATG  142
      | |||||||||||| ||||||| |||||||||||||||||||||||||||
seq2  ACCACTAGAGAATTAAGTGTGA-TATGAAAATCTTGTGAAAACTTTCATG  148

seq1  TAATGTTCAAATCTTAGATAATGTCAACTATTTATGCTGTGAGAAACTCT  192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTTCAAATCTTAGATAATGTCAACTATTTATGCTGTGAGAAACTCT  198

seq1  GAACATGTGGAAATGTAGAAAGCTTTTCATGACACCTTTTTACTTGTTCA  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGTGGAAATGTAGAAAGCTTTTCATGACACCTTTTTACTTGTTCA  248

seq1  TCCTCAAATGTTACAAGATGAAGACAAGTTGGGAAGTCAGAAGATAGTAT  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAAATGTTACAAGATGAAGACAAGTTGGGAAGTCAGAAGATAGTAT  298

seq1  TGTGTAACACTTTCATTGAGACAGAAGTAATCCATTTCAAAAGGGAACTA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAACACTTTCATTGAGACAGAAGTAATCCATTTCAAAAGGGAACTA  348

seq1  TTTAAGGTCTTTAATAAAACCCTCAAAATATCTAATAAAACTGGTAACAC  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGGTCTTTAATAAAACCCTCAAAATATCTAATAAAACTGGTAACAC  398

seq1  TCTGTATATTTAATTCAAATGAGCCAATTCAGAAAAATTATACTTAAAAG  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATATTTAATTCAAATGAGCCAATTCAGAAAAATTATACTTAAAAG  448

seq1  AGTATCTGGCTAACTGAGCCACCCAGTCAGCATATTCTTTATCCTATAAG  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCTGGCTAACTGAGCCACCCAGTCAGCATATTCTTTATCCTATAAG  498

seq1  TATGCTTACAGATGTGAAGTATGCTTCGAGTATCCATTAATCATAATTCT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTTACAGATGTGAAGTATGCTTCGAGTATCCATTAATCATAATTCT  548

seq1  TCTCAAATGCTTGTTTCACATTATAGGATAACAAGTGACTCTGAGTCTCT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAATGCTTGTTTCACATTATAGGATAACAAGTGACTCTGAGTCTCT  598

seq1  TGTGATCTGGTCAACAAGTCCTTTCCTATTGTCCTGTAACTAACTCCAAT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATCTGGTCAACAAGTCCTTTCCTATTGTCCTGTAACTAACTCCAAT  648

seq1  AAAGCTGAAATTTCTACATGTTTGCTTTGGTTGTTTTCAACTTGCACTTG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTGAAATTTCTACATGTTTGCTTTGGTTGTTTTCAACTTGCACTTG  698

seq1  GGATACTCAGATGAATATATGTTGCATATTCCCAGGAAATGCCTCACAGA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACTCAGATGAATATATGTTGCATATTCCCAGGAAATGCCTCACAGA  748

seq1  AAACATACGTTGAAGTCAGGAATATTTTTGCAAGGCTGTATCATAAAGTT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATACGTTGAAGTCAGGAATATTTTTGCAAGGCTGTATCATAAAGTT  798

seq1  AATAGTAGTTATTTTTCAACTGATTGATAACAATCCCTTTGGGGTGTAAA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTAGTTATTTTTCAACTGATTGATAACAATCCCTTTGGGGTGTAAA  848

seq1  GACCCTTTCACAGTGGTTGCTTAAAAGCGTAGGAAAGCACATATTTCCTA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTTTCACAGTGGTTGCTTAAAAGCGTAGGAAAGCACATATTTCCTA  898

seq1  TTGTTTTAGAACTGAGAAATCATTCATTGAACTGTTGGGTAGTCTGCCCA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTAGAACTGAGAAATCATTCATTGAACTGTTGGGTAGTCTGCCCA  948

seq1  CCAAAGAATAATTTGAATTCTATGTCAGTGTTTAGCATTAAAAAATTAGA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGAATAATTTGAATTCTATGTCAGTGTTTAGCATTAAAAAATTAGA  998

seq1  AACACTGTATTAGATATGGTGATTTGTGTTAACTAAAATAGGGAAGATTC  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTGTATTAGATATGGTGATTTGTGTTAACTAAAATAGGGAAGATTC  1048

seq1  AGTTCAGTGTTCCAGGCTAGTATTACTAGGTTAAGATAAAAAGGCTCAAA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAGTGTTCCAGGCTAGTATTACTAGGTTAAGATAAAAAGGCTCAAA  1098

seq1  AAAGGAAATATGTAGATGCCTTCAGAGCCTCAGAAATAACTCTTGAATTC  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAATATGTAGATGCCTTCAGAGCCTCAGAAATAACTCTTGAATTC  1148