BAC Information

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BAC

Clone NameB6Ng01-325D16
Chromosome4 (Build37)
Map Location 23,028,346 - 23,028,758
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040379, Fbxl4, Pou3f2, LOC664911, 1700025O08Rik
Downstream geneLOC625462, LOC383998, LOC100040464, LOC623873
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325D16.bB6Ng01-325D16.g
ACCGA113341GA113342
length1,059791
definitionB6Ng01-325D16.b B6Ng01-325D16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctttggtgatgaacagcaaagtacaattgtaggctgaataaacc
ctttcttccccaacttgcttcttggtcatgttttgtgcaggaatagaaac
cctgactaagacaaattggtaccagcatagctgggtattcctgtgacaac
ctgaccatgttttgaggaggactgtagaaggactttagagatttgggcta
gaagagccattgagtattaagagctctgtggggtgttctgtaggagctta
gaagataatgttgagaacagtgaaaatgatggaggcctggcttgtgaaat
ttcagagggaagattaaagatttatcagagctgttgctgttttgattgtg
aagatactgtggttttggttagttggggctgaagaatcagctgtgattaa
caagataccagaactactaaatcgaaaattttacatttcaggcaagtact
gctgactagcataagctaaaaattagtggtgattaagaagaaaccaacat
cactgaggtgaaatattctgggaaatgttttctgagagagcacaaagagg
ctgtgttccagagacactctaggttgtaccttgtgttgcggctggacttg
ataatacataagaaagaagccagtaagcagcatttctctatggcttctgc
ctcctgtctccaagttcctactctgtgtgagttcctgtcctgacttcctt
tcctgatcaacagcaatgtggaagtgtaaactgagtaaaccctttccttc
ccaattttcttcttggtcatgttttgtgcaggagtagaaaacttgactaa
gacatacatgcacacacacacacaatcacacacacaatcacacacactat
cacacacactatcacacacacacacacatatactcatgcacccacacatg
cacacaaacatacatatagactctactgatgaatacaagaaaaattcaaa
atctatgagaagatcccttttcctatgtttgcttggattttaatttctca
gaccgaaggataaagaatccagacttgcagaaggcagcttctttgggaat
ataatcata

gaattctcacctgaggaataccgaatgactgagaagcacctgaaaaaatg
ctcagcatccttaatcatcagagaaatgcaaatcaaaacaatgctgagat
tccatgtcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatggtggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaattggacatagtactaagggacactttgccccttcttagaattgga
aacaatcacccatggaaggagttacaaaaacaacgtttggagctgtgaca
aaaggatggaccatctagagactgccatatccaggcatccatcacatcat
tagcctccaaaggatgacaccattgcatacactagcaaacgtttgctgca
aggaccctgatatagctgtctcttgtgagactaggttggggcctagcaaa
cacagaagtagaggctcacagtccgctattgggtggatcacagggccccc
aatggaggagctagagaaagtatccaaggagctaaagagatctgcaaccc
tgtaggtgcaacaacattatgaactaaccagtaccccggagctcttgact
ctagctgcatatgtatcaaaagatggcctagtaggccatcactggaaaga
gagtcccattggatatgcaaactttatatgccccagtacaggggaacggc
cagggccaaaaaatgggaatggatgggtatggggagtgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_23028346_23028758
seq2: B6Ng01-325D16.b_133_540 (reverse)

seq1  TGGTCTCTTCTTAATCACCGCTAATTTCTTAGCTCCAGCTAACCAGCATC  50
      |||| |||||||||||||| ||||||| ||||||   ||||  |||||  
seq2  TGGTTTCTTCTTAATCACCACTAATTT-TTAGCTTATGCTAGTCAGCAGT  49

seq1  AATAGTCCCAGTAATGCAAAGCTTTTGCTTCAGTAGTTCTGGTATCTTGT  100
      | |  | || | |||| |||  ||| | || |||||||||||||||||||
seq2  ACT--TGCCTGAAATGTAAAATTTTCGATTTAGTAGTTCTGGTATCTTGT  97

seq1  TAATCACAGCTGATTCTTCAGCCCCAGCTAACCAGAACTACAGAATCTTC  150
      |||||||||||||||||||||||||| ||||||| ||| |||| ||||||
seq2  TAATCACAGCTGATTCTTCAGCCCCAACTAACCAAAACCACAGTATCTTC  147

seq1  ACAATCAAAACAGCAATGGCCCTGAAAAGAGTCTTTAATTTTCCCTCTGA  200
      ||||||||||||||||  || |||| |  | |||||||| ||||||||||
seq2  ACAATCAAAACAGCAACAGCTCTGATA--AATCTTTAATCTTCCCTCTGA  195

seq1  AATTTCACAAGCCAGGCCTCCATCTTCTGCACTGTTCTCAACATTATCTT  250
      |||||||||||||||||||||||| | | |||||||||||||||||||||
seq2  AATTTCACAAGCCAGGCCTCCATCATTTTCACTGTTCTCAACATTATCTT  245

seq1  CCAAGCTCCTACACAACATCCCACAGAGCTCTTAACAACAAATGGATCTT  300
      | ||||||||||| |||| |||||||||||||||| |   ||||| ||||
seq2  CTAAGCTCCTACAGAACACCCCACAGAGCTCTTAATACTCAATGGCTCTT  295

seq1  CAAGACCAAAGTTCCAAAGTCCTTCCACAGACCTCCCCAAAACATGGTCA  350
      | || |||||  || |||||||||| |||| ||||| |||||||||||||
seq2  CTAGCCCAAATCTCTAAAGTCCTTCTACAGTCCTCCTCAAAACATGGTCA  345

seq1  GGTTGTCACAGGAATACCCCACTCTGCTGGTACCAATTTGTCTTAGTCAG  400
      |||||||||||||||||||  || ||||||||||||||||||||||||||
seq2  GGTTGTCACAGGAATACCCAGCTATGCTGGTACCAATTTGTCTTAGTCAG  395

seq1  GGTTTCTATTCCT  413
      |||||||||||||
seq2  GGTTTCTATTCCT  408


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