BAC Information

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BAC

Clone NameB6Ng01-325E05
Chromosome4 (Build37)
Map Location 110,683,098 - 110,684,166
singlet/doubletsinglet
Overlap genenone
Upstream geneElavl4
Downstream geneLOC100040381, 2310026E23Rik, Spata6, LOC621612, Slc5a9, LOC639774, C130057D23Rik, LOC639781
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325E05.bB6Ng01-325E05.g
ACCGA113367GA113368
length1,2781,102
definitionB6Ng01-325E05.b B6Ng01-325E05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttaggtatatgcctaggaggggtatagatggatcatatgttag
attgacttttagtttcataagcatctttcatattattctgcactcctatc
agcagtgaggaaaggctccttttccccacattgtattcactttacatctc
attcactacccccttcccagtcaacccctcccacaatttccctcatctgc
cctctccttctctgcactggtggggctcctgcatatcctccagctctggc
acttcaagtctctacaaggctaggtgcttctcccactgaggcaagataaa
gcagcccagctagaagaacatatccggagtacagacaacagattctgagt
tgttctggactcacaggaagaccaagctcagatctgctacatatgtggta
ggaggcctaggttcagcccatgtatgttctttggttggtggttcagtctc
tgagagctctgaggtgtccagattagttgattctgttggtcttcctgtgg
agttcccatctccttgggggcagcaatcattcctcctattcttccataag
tttccaagctccatccactgtttgactgtggctgtatgcttctgaatcag
ttggtgggtcaggcctttcatgtcagaggacagccatgctagacttctat
ctaaaagcataacagtatcatcaatagtgttaggaactggtgcttgccct
tgagatgtgtttcaagttgggtcccctattagttgaccattctcacagcc
tctgctccatcccctatgcctgcatttcttgtagacaggataaatttggg
gtgaaagttttgtgagtgagttagtatctctttagcttcactgaggttca
tgcctagctataggaggtggcctcttcagttccatatctccaatgttgtt
agttacccattgattcttgggtaccttccttatcccaggtttctatcttg
tcctggagatgctccccactacctcatcccagtcagttgaattttaaatc
attttcatggcatctagcatctcatctgttcttccccacacctgaacctg
agtccccactcccctcccatcaccctttcctctagttcatcccttatcta
cctcttatgactatttatttcccttctaagtgagaatcaagctcctgaat
tgtgctttcttcggttagctcttttgtctcaagtgtgcatgaacctgtaa
ttgtacctaataaattgcgtctgaactgagagttactcggactcctacct
atttctggcacaataccaagaaaaggtc

gaattccagaatatcaagacagggagatctctgagttcaaggtcatctgg
aattaaaggctgggaggcatacacctttaatctgggctacaccttctgct
ggagacctacctaaggacattgtaagaaggaagattctctctccttcacc
tgtttgccttgtgggactgagcaactgctagatccttggacttccattca
cagctgctgctgaccattgttgggagttggactacagactgtacatcatc
aacaattcccttactatatagagactacccataagttctgtgactctaga
gaaccctgactaatacagttatcaagaaggggccagaatgctaacatttg
tttggtagtcaagggaacacaacaagttcaggtgaaactacagaaaacaa
gaagtgaacaggactagttccgaggtatggcctccagatttggaaaaatc
taaaagagacaaagtttcaaaatttagaattgagatgataaattgctcct
gttgtctcagaaatatattcagaaagtacttgagtgagcatagagtaata
aggaaatgtggtagtcaagagcctatgaagataatgcacacaaaaattaa
ctgaagaagatagagaaggtactcaatgtcttaaagtctttgtcatgcaa
ccataggacatgaattctagccccagaatctatagagattagtggctttg
tttataattctagaactaggagatgaaaaaatcaggatcctcagagctta
ctcatcagtcagcccaatttacttggtttcaaagcacaaggaggatgata
actaaggaatgacacccatgtttgacctttggcctccacatgcactatct
catattttcatagaccctcttaatttatgatcttcaaatattccctatag
agaagaaaagcagaataagtatagtggtctcgcttctgatatgtcagaat
aatagcttaattttcaattaaattactagaggattactttaaattctgct
atttttagctgtggattttgtgactctcagtccatcagttttatcaataa
tacccacttattacctttatagtggtgggagtacacagtatctttcaata
gt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_110683098_110684166
seq2: B6Ng01-325E05.g_106_1168 (reverse)

seq1  ACTA-TGAAAGATACTGTGTACT-CCACAACTATTAAAGGTAAT-AGTGT  47
      |||| |||||||||||||||||| |||| |||| |||||||||| |||| 
seq2  ACTATTGAAAGATACTGTGTACTCCCACCACTA-TAAAGGTAATAAGTGG  49

seq1  GTATTTTATTGATAAAACTGATGGACTGAGAAGTCACAAAAAATTCCAAC  97
      |||  ||||||||||||||||||||||||| ||||||||||   ||| ||
seq2  GTA--TTATTGATAAAACTGATGGACTGAG-AGTCACAAAA---TCC-AC  92

seq1  AGCTAAAAATAGCAGAATTTAAAGTTAATCTTCTAGTAATTTAATTGAAA  147
      |||||||||||||||||||||||| ||||| |||||||||||||||||||
seq2  AGCTAAAAATAGCAGAATTTAAAG-TAATCCTCTAGTAATTTAATTGAAA  141

seq1  ATTAAGCTATTATTCTGACATATCAGAAGCGAGACCACTATACTTATTCT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGCTATTATTCTGACATATCAGAAGCGAGACCACTATACTTATTCT  191

seq1  GCTTTTCTTCTCTATAGGGAATATTTGAAGATCATAAATTAAGAGGGTCT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTCTTCTCTATAGGGAATATTTGAAGATCATAAATTAAGAGGGTCT  241

seq1  ATGAAAATATGAGATAGTGCATGTGGAGGCCAAAGGTCAAACATGGGTGT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAATATGAGATAGTGCATGTGGAGGCCAAAGGTCAAACATGGGTGT  291

seq1  CATTCCTTAGTTATCATCCTCCTTGTGCTTTGAAACCAAGTAAATTGGGC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCTTAGTTATCATCCTCCTTGTGCTTTGAAACCAAGTAAATTGGGC  341

seq1  TGACTGATGAGTAAGCTCTGAGGATCCTGATTTTTTCATCTCCTAGTTCT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGATGAGTAAGCTCTGAGGATCCTGATTTTTTCATCTCCTAGTTCT  391

seq1  AGAATTATAAACAAAGCCACTAATCTCTATAGATTCTGGGGCTAGAATTC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTATAAACAAAGCCACTAATCTCTATAGATTCTGGGGCTAGAATTC  441

seq1  ATGTCCTATGGTTGCATGACAAAGACTTTAAGACATTGAGTACCTTCTCT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCTATGGTTGCATGACAAAGACTTTAAGACATTGAGTACCTTCTCT  491

seq1  ATCTTCTTCAGTTAATTTTTGTGTGCATTATCTTCATAGGCTCTTGACTA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCTTCAGTTAATTTTTGTGTGCATTATCTTCATAGGCTCTTGACTA  541

seq1  CCACATTTCCTTATTACTCTATGCTCACTCAAGTACTTTCTGAATATATT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATTTCCTTATTACTCTATGCTCACTCAAGTACTTTCTGAATATATT  591

seq1  TCTGAGACAACAGGAGCAATTTATCATCTCAATTCTAAATTTTGAAACTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGACAACAGGAGCAATTTATCATCTCAATTCTAAATTTTGAAACTT  641

seq1  TGTCTCTTTTAGATTTTTCCAAATCTGGAGGCCATACCTCGGAACTAGTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTTTTAGATTTTTCCAAATCTGGAGGCCATACCTCGGAACTAGTC  691

seq1  CTGTTCACTTCTTGTTTTCTGTAGTTTCACCTGAACTTGTTGTGTTCCCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCACTTCTTGTTTTCTGTAGTTTCACCTGAACTTGTTGTGTTCCCT  741

seq1  TGACTACCAAACAAATGTTAGCATTCTGGCCCCTTCTTGATAACTGTATT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTACCAAACAAATGTTAGCATTCTGGCCCCTTCTTGATAACTGTATT  791

seq1  AGTCAGGGTTCTCTAGAGTCACAGAACTTATGGGTAGTCTCTATATAGTA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGGGTTCTCTAGAGTCACAGAACTTATGGGTAGTCTCTATATAGTA  841

seq1  AGGGAATTGTTGATGATGTACAGTCTGTAGTCCAACTCCCAACAATGGTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAATTGTTGATGATGTACAGTCTGTAGTCCAACTCCCAACAATGGTC  891

seq1  AGCAGCAGCTGTGAATGGAAGTCCAAGGATCTAGCAGTTGCTCAGTCCCA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCAGCTGTGAATGGAAGTCCAAGGATCTAGCAGTTGCTCAGTCCCA  941

seq1  CAAGGCAAACAGGTGAAGGAGAGAGAATCTTCCTTCTTACAATGTCCTTA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCAAACAGGTGAAGGAGAGAGAATCTTCCTTCTTACAATGTCCTTA  991

seq1  GGTAGGTCTCCAGCAGAAGGTGTAGCCCAGATTAAAGGTGTATGCCTCCC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGGTCTCCAGCAGAAGGTGTAGCCCAGATTAAAGGTGTATGCCTCCC  1041

seq1  AGCCTTTAATTCCAGATGACCT  1069
      ||||||||||||||||||||||
seq2  AGCCTTTAATTCCAGATGACCT  1063


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