BAC Information

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BAC

Clone NameB6Ng01-325E07
Chromosome4 (Build37)
Map Location 85,865,299 - 86,010,789
singlet/doubletdoublet
Overlap geneAdamtsl1
Upstream geneSh3gl2, A930009N24, LOC668052
Downstream gene4930500O09Rik, Rraga, 6230416J20Rik, LOC100040388, Adfp, EG624685, Dennd4c, Rps6, Asah3l, Slc24a2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325E07.bB6Ng01-325E07.g
ACCGA113371GA113372
length1,0511,114
definitionB6Ng01-325E07.b B6Ng01-325E07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,865,299 - 85,866,281)(86,009,679 - 86,010,789)
sequence
gaattccagttctcattgtgctgtaacaataacaggtgatgacataccca
ttttatcaaccatgaaactcagcttcaggaaatactcacccgaggtcata
cccatggtaatcttggactagagtcacatttcttttcttccagcccaaaa
ctcttttccattttctatgttccttctaagaatgtatcccccccccaagc
tctcattggaaaacatctggaattaaatgaatgtaaagttattctaaatt
agattatgtaaaaattgtaatgtattcatacaaatttgaaaatgagccag
ataatttaagaaatatagaaaaacatttaaaatcaccctttcaccagaga
ttcatgatgaaataaatttctatgttactttagtaaagaaaaggattata
aatctaaaagcaaaggattataatttttcagatttagctgttaaaattca
actcaacttgtggattcaggttgattgacagcagtattaactgctgtgaa
tcatgtggggatgggtacagtagaacagatgtctcatcaacatgcccact
tcctgccctttgattatatacacccagatagggattgttgcattttacgg
tgcttctatgtttacaactttttgaggacttctttttcagttggttgaac
caatttgcattgccacactcagtacaaaggctcccttctctctgcattcc
tgccaaccttagctctcctcagttcagtaactgagttcatcctggcaggt
atgtgctaacaggtaaccatgggtttccttgcatttccatcatgattggt
gatgttgggtgtctgttggcactttgccatcccttttttaagaagatcat
tagcctcttttagccacatcatttcttttcttgctaaatcagtcgtgttt
ctagtatattttgcatactcactatgtatgtttacacctaatctctccca
ttctttgaaatggtctctttattctgtttattgcttcctctcctgtgtac
aatatttttaatttaatattataccatttttttttctttgcttgtgttgc
t

gaattctgggcatggacttgatcagggtccaactcccttgccagtactta
ataaagcttgccttgatgggatgattacggatttggcctttctcctcagc
attttcaggtttaacagtttcaacactaataaccaccctcagcagaatct
ctggcacaatacagatggtgccctgtgagaagaggtgctggagacttttg
gtacaacacatagaggggcacaaaagcttaacagggtgaggaataaagag
gagaaaaaggcgaaagaggcggaggaggaggggaatgaggaggaagaagg
agcaacagtcgtagtagtataagagaagggagaactctgttactgaagag
atgaaactgcttctattttgaagaattatgagttttagtatattagaaaa
acaaataatttaaatgtgatggattgtccctaaactttatccagttctga
gatgatccaaaaactcaagtcacctgcagaggtcttattggagatatgac
caaagcctccatcttcagagaagacttggaaccacctaggctaggcagac
cctcatttctgagactgtccaagaagacatggtaagatccatggcaaatc
taaacatcagttggagagaaggtgaaggtgctggcactcattaactgaaa
catgagtctagtgcagcattcaagcctaaagcaatgaaatactgggaatc
tcatacagttgatatctgaaattaagcagattatatttagtccaaatgta
cttaatagacaatgcctcatagtgagtatatcaaagcattgtctcaagaa
acaccagactctgcctaccctgcaattgtcacaagtctcttacaagtacc
cattggagttatactaaaaaaaaaacccaaaaaacaaaagaacctcttag
aaggggaattttcagttaaagtattcagggttcctagcttaaggtttaaa
ggacccaaattgactgaaacctatgaaactcttaatgaatataatacatc
ccacactgatatttggtgttacaggcactgtctatcaatgtcttacttgc
tgtttcctttctggccagaatattccaggatataagtattatgtaataat
atacttaacaatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_85865299_85866281
seq2: B6Ng01-325E07.b_46_1028

seq1  GAATTCCAGTTCTCATTGTGCTGTAACAATAACAGGTGATGACATACCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTTCTCATTGTGCTGTAACAATAACAGGTGATGACATACCCA  50

seq1  TTTTATCAACCATGAAACTCAGCTTCAGGAAATACTCACCCGAGGTCATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATCAACCATGAAACTCAGCTTCAGGAAATACTCACCCGAGGTCATA  100

seq1  CCCATGGTAATCTTGGACTAGAGTCACATTTCTTTTCTTCCAGCCCAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGGTAATCTTGGACTAGAGTCACATTTCTTTTCTTCCAGCCCAAAA  150

seq1  CTCTTTTCCATTTTCTATGTTCCTTCTAAGAATGTATCCCCCCCCCAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTCCATTTTCTATGTTCCTTCTAAGAATGTATCCCCCCCCCAAGC  200

seq1  TCTCATTGGAAAACATCTGGAATTAAATGAATGTAAAGTTATTCTAAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTGGAAAACATCTGGAATTAAATGAATGTAAAGTTATTCTAAATT  250

seq1  AGATTATGTAAAAATTGTAATGTATTCATACAAATTTGAAAATGAGCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTATGTAAAAATTGTAATGTATTCATACAAATTTGAAAATGAGCCAG  300

seq1  ATAATTTAAGAAATATAGAAAAACATTTAAAATCACCCTTTCACCAGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTAAGAAATATAGAAAAACATTTAAAATCACCCTTTCACCAGAGA  350

seq1  TTCATGATGAAATAAATTTCTATGTTACTTTAGTAAAGAAAAGGATTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGATGAAATAAATTTCTATGTTACTTTAGTAAAGAAAAGGATTATA  400

seq1  AATCTAAAAGCAAAGGATTATAATTTTTCAGATTTAGCTGTTAAAATTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTAAAAGCAAAGGATTATAATTTTTCAGATTTAGCTGTTAAAATTCA  450

seq1  ACTCAACTTGTGGATTCAGGTTGATTGACAGCAGTATTAACTGCTGTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAACTTGTGGATTCAGGTTGATTGACAGCAGTATTAACTGCTGTGAA  500

seq1  TCATGTGGGGATGGGTACAGTAGAACAGATGTCTCATCAACATGCCCACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTGGGGATGGGTACAGTAGAACAGATGTCTCATCAACATGCCCACT  550

seq1  TCCTGCCCTTTGATTATATACACCCAGATAGGGATTGTTGCATTTTACGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCCCTTTGATTATATACACCCAGATAGGGATTGTTGCATTTTACGG  600

seq1  TGCTTCTATGTTTACAACTTTTTGAGGACTTCTTTTTCAGTTGGTTGAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTATGTTTACAACTTTTTGAGGACTTCTTTTTCAGTTGGTTGAAC  650

seq1  CAATTTGCATTGCCACACTCAGTACAAAGGCTCCCTTCTCTCTGCATTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTGCATTGCCACACTCAGTACAAAGGCTCCCTTCTCTCTGCATTCC  700

seq1  TGCCAACCTTAGCTCTCCTCAGTTCAGTAACTGAGTTCATCCTGGCAGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAACCTTAGCTCTCCTCAGTTCAGTAACTGAGTTCATCCTGGCAGGT  750

seq1  ATGTGCTAACAGGTAACCATGGGTTTCCTTGCATTTCCATCATGATTGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCTAACAGGTAACCATGGGTTTCCTTGCATTTCCATCATGATTGGT  800

seq1  GATGTTGGGTGTCTGTTGGCACTTTGCCATCCCTTTTTTAAGAAGATCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTGGGTGTCTGTTGGCACTTTGCCATCCCTTTTTTAAGAAGATCAT  850

seq1  TAGCCTCTTTTAGCCACATCATTTCTTTTCTTGCTAAATCAGTCGTGTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTCTTTTAGCCACATCATTTCTTTTCTTGCTAAATCAGTCGTGTTT  900

seq1  CTAGTATATTTTGCATACTCACTATGTATGTTTACACCTAATCTCTCCCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTATATTTTGCATACTCACTATGTATGTTTACACCTAATCTCTCCCA  950

seq1  TTCTTTGAAATGGTCTCTTTATTCTGTTTATTG  983
      |||||||||||||||||||||||||||||||||
seq2  TTCTTTGAAATGGTCTCTTTATTCTGTTTATTG  983


seq1: chr4_86009679_86010789
seq2: B6Ng01-325E07.g_65_1178 (reverse)

seq1  ACATATGTTA---ATATTATATATAT-ATACTTAATATCCTGGAATATTT  46
      |||| |||||   ||||||| || || |||||| ||||||||||||| ||
seq2  ACAT-TGTTAAGTATATTAT-TACATAATACTT-ATATCCTGGAATA-TT  46

seq1  CTGGCCAGAAA-GAAACAGCAAGT-AGACATTGATAGACAGTGCCTGTGA  94
      ||||||||||| |||||||||||| ||||||||||||||||||||||| |
seq2  CTGGCCAGAAAGGAAACAGCAAGTAAGACATTGATAGACAGTGCCTGTAA  96

seq1  CAACAAATATCAGTGTGGGATGTTATTAATATTCATAAAGGTTTTCATAG  144
      || ||||||||||||||||||| |||| |||||||| |||  ||||||||
seq2  CACCAAATATCAGTGTGGGATG-TATT-ATATTCATTAAGAGTTTCATAG  144

seq1  GTTTCAGTCAATTTTGGTCCTTTAAACC-TAAGCTAGGAACCCTGAATAC  193
      |||||||||||||| ||||||||||||| |||||||||||||||||||||
seq2  GTTTCAGTCAATTTGGGTCCTTTAAACCTTAAGCTAGGAACCCTGAATAC  194

seq1  TTTAACTGAAAATTCCCCTTCTAAGAGGTTC-TTTGTTTTTTGGGTTTTT  242
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTTAACTGAAAATTCCCCTTCTAAGAGGTTCTTTTGTTTTTTGGGTTTTT  244

seq1  TTTTTAGTATAACTCCAAT-GGTACTTGTAAGAGACTTGTGACAATTGCA  291
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTTTTAGTATAACTCCAATGGGTACTTGTAAGAGACTTGTGACAATTGCA  294

seq1  GGGTAGGCAGAGTCTGGTGTTTCTTGAGACAATGCTTTGATATACTCACT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAGGCAGAGTCTGGTGTTTCTTGAGACAATGCTTTGATATACTCACT  344

seq1  ATGAGGCATTGTCTATTAAGTACATTTGGACTAAATATAATCTGCTTAAT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGCATTGTCTATTAAGTACATTTGGACTAAATATAATCTGCTTAAT  394

seq1  TTCAGATATCAACTGTATGAGATTCCCAGTATTTCATTGCTTTAGGCTTG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGATATCAACTGTATGAGATTCCCAGTATTTCATTGCTTTAGGCTTG  444

seq1  AATGCTGCACTAGACTCATGTTTCAGTTAATGAGTGCCAGCACCTTCACC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTGCACTAGACTCATGTTTCAGTTAATGAGTGCCAGCACCTTCACC  494

seq1  TTCTCTCCAACTGATGTTTAGATTTGCCATGGATCTTACCATGTCTTCTT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCCAACTGATGTTTAGATTTGCCATGGATCTTACCATGTCTTCTT  544

seq1  GGACAGTCTCAGAAATGAGGGTCTGCCTAGCCTAGGTGGTTCCAAGTCTT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGTCTCAGAAATGAGGGTCTGCCTAGCCTAGGTGGTTCCAAGTCTT  594

seq1  CTCTGAAGATGGAGGCTTTGGTCATATCTCCAATAAGACCTCTGCAGGTG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAAGATGGAGGCTTTGGTCATATCTCCAATAAGACCTCTGCAGGTG  644

seq1  ACTTGAGTTTTTGGATCATCTCAGAACTGGATAAAGTTTAGGGACAATCC  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAGTTTTTGGATCATCTCAGAACTGGATAAAGTTTAGGGACAATCC  694

seq1  ATCACATTTAAATTATTTGTTTTTCTAATATACTAAAACTCATAATTCTT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACATTTAAATTATTTGTTTTTCTAATATACTAAAACTCATAATTCTT  744

seq1  CAAAATAGAAGCAGTTTCATCTCTTCAGTAACAGAGTTCTCCCTTCTCTT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATAGAAGCAGTTTCATCTCTTCAGTAACAGAGTTCTCCCTTCTCTT  794

seq1  ATACTACTACGACTGTTGCTCCTTCTTCCTCCTCATTCCCCTCCTCCTCC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTACTACGACTGTTGCTCCTTCTTCCTCCTCATTCCCCTCCTCCTCC  844

seq1  GCCTCTTTCGCCTTTTTCTCCTCTTTATTCCTCACCCTGTTAAGCTTTTG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTTTCGCCTTTTTCTCCTCTTTATTCCTCACCCTGTTAAGCTTTTG  894

seq1  TGCCCCTCTATGTGTTGTACCAAAAGTCTCCAGCACCTCTTCTCACAGGG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCTCTATGTGTTGTACCAAAAGTCTCCAGCACCTCTTCTCACAGGG  944

seq1  CACCATCTGTATTGTGCCAGAGATTCTGCTGAGGGTGGTTATTAGTGTTG  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATCTGTATTGTGCCAGAGATTCTGCTGAGGGTGGTTATTAGTGTTG  994

seq1  AAACTGTTAAACCTGAAAATGCTGAGGAGAAAGGCCAAATCCGTAATCAT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTTAAACCTGAAAATGCTGAGGAGAAAGGCCAAATCCGTAATCAT  1044

seq1  CCCATCAAGGCAAGCTTTATTAAGTACTGGCAAGGGAGTTGGACCCTGAT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCAAGGCAAGCTTTATTAAGTACTGGCAAGGGAGTTGGACCCTGAT  1094

seq1  CAAGTCCATGCCCAGAATTC  1111
      ||||||||||||||||||||
seq2  CAAGTCCATGCCCAGAATTC  1114


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