BAC Information

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BAC

Clone NameB6Ng01-325H05
Chromosome4 (Build37)
Map Location 31,218,804 - 31,320,436
singlet/doubletdoublet
Overlap geneLOC100040891
Upstream geneLOC665185, LOC619906, LOC100040864
Downstream geneMap3k7, LOC665218, LOC665228, LOC665232
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325H05.bB6Ng01-325H05.g
ACCGA113505GA113506
length1,2481,123
definitionB6Ng01-325H05.b B6Ng01-325H05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,319,174 - 31,320,436)(31,218,804 - 31,219,943)
sequence
gaattctattgcaaattaattatattaactatattgaaatgagctgtgaa
aacagaggtgtctgtgtctaaatctacaagattcttatttaaagcagtat
atatacatagtatagtgcagcatagtgcagtatagtgcagtatatatagt
gcagcatagtatggtatggtatagtacagtgcactatagtacagtacagt
atagtatagagatatttgaggttctttagaactattgtgtgcatttgcaa
ttgacttaagcaatgttactctggggaagcatgctgatgcacatccacct
gtcaccccagaaccgagaagcagaagtgtcaagaagcacttgagcttcaa
agtccagccacaatgagacacagcctcgcaatacagtagaatccgcatgt
gaattttaaaagaaatgaattacaaataaatgtcttttaacttaatatat
ttttgtgtgtggcatggcagaaagaactgtgacaaaatccagactataca
gccagaacgttggctcatacagacatgactctgttgattttacatatgaa
tctctgctattgttataatatgttagtatattctccttgctatcatattg
ggaatgattgctattgttcctaaaccatctaccaccgggctagatgtatt
tatatctcatgatgatcctgaggaataattagtgttatcaatgcaaaaat
tgcttattgcaaatggcaaaaccgagtttgtgagaactgaaatattacta
tcttttgtttgggggaaaaatgtttcatctttccctgcttccttttttag
ttgaatataggttcagagtctacatttcaagtctcctggatcgtgaagtt
cttgtgggatgccaggcagaggatatcttattttgcttgtgatcttgcaa
ttctggcatcatggtgctagctaacggaacaagattgcttgacccagagg
aagcatgccacagcctatttagtcatttgggaaagtggtgtatgtaaaag
tttctgccctaaactggtagctctgggcacaacatgggtgctctctagct
tgatggttcatttgtttgtttatgtcagctacttgtattttctgagatct
caaactgattcttcaagtcaatatttgtctggctgggaacacatctacac
ttgacctagcaaccatgtcgaacgactgatgctgttccatgtagcatgtc
ctgcacccaatcgatccctccaactgtgctggtggtaatttcaagcga

gaattccttgttgttgctttccttgaatatgggaaggaagaattactaat
ttcacatttcattgaaagaaagacatgtagaccttaccactgcctaccaa
gtactgcgcaatctataatccatggattttttttttcaacgtacctttta
cttttcttctgccgcagtggcctcatctgggaaccttctagaaatgcaga
caccatgctaccttatgacctttgcacatattgttcaccctgccttaccc
actcttccagtgcagcgtgttcttcattgtctgccccacagtcgcacaat
ttcagcatgcttccatcttttgccacctctgctctgtcctcacttgctat
ggctccaggagctcttcatatatgtgaatattgtggtttgattatggctc
attgtgtatttgctgtgatacaagcttcacatgaattgagaatacagctt
ggttcactgatgtatttaatatccctagaaaaactagtggctcttcacag
gagctcaggaaatattgattgatcaggagatattgattgaattggatgtt
caaagaaaaagttttcaataaagatattttaacttatatatacaactttt
tacaagttatcattatgtttcttgatctataaaacagcatcatttttgtt
tttgatatacatagtgtagaaacaggaatatcaattttaaaatctatttt
ctttgttgttgttgttattgttgtttctttttgtctttttttattagatg
ttttcttcatttacatttcaaatgctatcctctttcctagtttcctctct
gaaaatcccctacaccctccccctgctccccaacctacccacttccactt
cttgggccctggcattcccctatactagggcataaaaactattttcaaaa
aatataatctcaaatgatttttgatgctaatacttttgaataatttgaat
tattttaggagctgtaagatagcttaattagataggaaatgagtagtatc
tataaacactttcatgtttactttgtcaacatgtttaattttgatcactc
taactagaaggatatttgacaagagtccaatttcaatatttcagtgctat
ggatctccttaacaattttatac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_31319174_31320436
seq2: B6Ng01-325H05.b_43_1290 (reverse)

seq1  TCACTTGAAA-TAC--ACAGCA-AGTTGGA-GGACAGAATGGGCTGCAGG  45
      || ||||||| |||   ||||| ||||||| |||  || |||| ||||||
seq2  TCGCTTGAAATTACCACCAGCACAGTTGGAGGGATCGATTGGG-TGCAGG  49

seq1  ACA-GCAAAACAAGGGAGCCCAGCGATCAGTCCTGTCTGCATGGTTGCTA  94
      ||| ||   ||| || |   |||| ||||||| | ||  |||||||||||
seq2  ACATGC--TACATGGAA---CAGC-ATCAGTCGT-TCGACATGGTTGCTA  92

seq1  GGTTCCAGTGGTAGA--TGGTCCCAG-CAGACAAATATTTGACTTTGATA  141
      || || ||| |||||  || |||||| |||||||||| ||||| |||| |
seq2  GG-TCAAGT-GTAGATGTGTTCCCAGCCAGACAAATA-TTGAC-TTGA-A  137

seq1  GAATCAGTTTGAGATCTTCAGAAAATACAAGTAGCTGACCATTAAACAAA  191
      |||||||||||||||| ||||||||||||||||||||||   ||||||||
seq2  GAATCAGTTTGAGATC-TCAGAAAATACAAGTAGCTGAC--ATAAACAAA  184

seq1  CAAATGAACAATCAAAGCTTAAGAGAGCACCCCATTGTGTTGCCCAGAGG  241
      ||||||||| ||| |||||  |||||||||||   |||  |||||||| |
seq2  CAAATGAACCATC-AAGCT--AGAGAGCACCC--ATGTTGTGCCCAGA-G  228

seq1  CTACCAGGTTTAGGGCAGAAACCTTTTACATACACCACTTTCCCAAATGA  291
      |||||| |||||||||||||| ||||||||||||||||||||||||||||
seq2  CTACCA-GTTTAGGGCAGAAA-CTTTTACATACACCACTTTCCCAAATGA  276

seq1  CTAAATAGGCTGTGGCATGCTTCCTCTGGGTCAAGCAATCTTGTTCCGTT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATAGGCTGTGGCATGCTTCCTCTGGGTCAAGCAATCTTGTTCCGTT  326

seq1  AGCTAGCACCATGATGCCAGAATTGCAAGATCACAAGCAAAATAAGATAT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGCACCATGATGCCAGAATTGCAAGATCACAAGCAAAATAAGATAT  376

seq1  CCTCTGCCTGGCATCCCACAAGAACTTCACGATCCAGGAGACTTGAAATG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCCTGGCATCCCACAAGAACTTCACGATCCAGGAGACTTGAAATG  426

seq1  TAGACTCTGAACCTATATTCAACTAAAAAAGGAAGCAGGGAAAGATGAAA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTCTGAACCTATATTCAACTAAAAAAGGAAGCAGGGAAAGATGAAA  476

seq1  CATTTTTCCCCCAAACAAAAGATAGTAATATTTCAGTTCTCACAAACTCG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTCCCCCAAACAAAAGATAGTAATATTTCAGTTCTCACAAACTCG  526

seq1  GTTTTGCCATTTGCAATAAGCAATTTTTGCATTGATAACACTAATTATTC  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGCCATTTGCAATAAGCAATTTTTGCATTGATAACACTAATTATTC  576

seq1  CTCAGGATCATCATGAGATATAAATACATCTAGCCCGGTGGTAGATGGTT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGATCATCATGAGATATAAATACATCTAGCCCGGTGGTAGATGGTT  626

seq1  TAGGAACAATAGCAATCATTCCCAATATGATAGCAAGGAGAATATACTAA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAACAATAGCAATCATTCCCAATATGATAGCAAGGAGAATATACTAA  676

seq1  CATATTATAACAATAGCAGAGATTCATATGTAAAATCAACAGAGTCATGT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTATAACAATAGCAGAGATTCATATGTAAAATCAACAGAGTCATGT  726

seq1  CTGTATGAGCCAACGTTCTGGCTGTATAGTCTGGATTTTGTCACAGTTCT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATGAGCCAACGTTCTGGCTGTATAGTCTGGATTTTGTCACAGTTCT  776

seq1  TTCTGCCATGCCACACACAAAAATATATTAAGTTAAAAGACATTTATTTG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCCATGCCACACACAAAAATATATTAAGTTAAAAGACATTTATTTG  826

seq1  TAATTCATTTCTTTTAAAATTCACATGCGGATTCTACTGTATTGCGAGGC  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCATTTCTTTTAAAATTCACATGCGGATTCTACTGTATTGCGAGGC  876

seq1  TGTGTCTCATTGTGGCTGGACTTTGAAGCTCAAGTGCTTCTTGACACTTC  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTCATTGTGGCTGGACTTTGAAGCTCAAGTGCTTCTTGACACTTC  926

seq1  TGCTTCTCGGTTCTGGGGTGACAGGTGGATGTGCATCAGCATGCTTCCCC  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTCGGTTCTGGGGTGACAGGTGGATGTGCATCAGCATGCTTCCCC  976

seq1  AGAGTAACATTGCTTAAGTCAATTGCAAATGCACACAATAGTTCTAAAGA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAACATTGCTTAAGTCAATTGCAAATGCACACAATAGTTCTAAAGA  1026

seq1  ACCTCAAATATCTCTATACTATACTGTACTGTACTATAGTGCACTGTACT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAAATATCTCTATACTATACTGTACTGTACTATAGTGCACTGTACT  1076

seq1  ATACCATACCATACTATGCTGCACTATATATACTGCACTATACTGCACTA  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCATACCATACTATGCTGCACTATATATACTGCACTATACTGCACTA  1126

seq1  TGCTGCACTATACTATGTATATATACTGCTTTAAATAAGAATCTTGTAGA  1191
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCACTATACTATGTATATATACTGCTTTAAATAAGAATCTTGTAGA  1176

seq1  TTTAGACACAGACACCTCTGTTTTCACAGCTCATTTCAATATAGTTAATA  1241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGACACAGACACCTCTGTTTTCACAGCTCATTTCAATATAGTTAATA  1226

seq1  TAATTAATTTGCAATAGAATTC  1263
      ||||||||||||||||||||||
seq2  TAATTAATTTGCAATAGAATTC  1248


seq1: chr4_31218804_31219943
seq2: B6Ng01-325H05.g_64_1186

seq1  GAATTCCTTGTTGTTGCTTTCCTTGAATATGGGAAGGAAGAATTACTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGTTGTTGCTTTCCTTGAATATGGGAAGGAAGAATTACTAAT  50

seq1  TTCACATTTCATTGAAAGAAAGACATGTAGACCTTACCACTGCCTACCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATTTCATTGAAAGAAAGACATGTAGACCTTACCACTGCCTACCAA  100

seq1  GTACTGCGCAATCTATAATCCATGGATTTTTTTTTTCAACGTACCTTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGCGCAATCTATAATCCATGGATTTTTTTTTTCAACGTACCTTTTA  150

seq1  CTTTTCTTCTGCCGCAGTGGCCTCATCTGGGAACCTTCTAGAAATGCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTTCTGCCGCAGTGGCCTCATCTGGGAACCTTCTAGAAATGCAGA  200

seq1  CACCATGCTACCTTATGACCTTTGCACATATTGTTCACCCTGCCTTACCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATGCTACCTTATGACCTTTGCACATATTGTTCACCCTGCCTTACCC  250

seq1  ACTCTTCCAGTGCAGCGTGTTCTTCATTGTCTGCCCCACAGTCGCACAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTCCAGTGCAGCGTGTTCTTCATTGTCTGCCCCACAGTCGCACAAT  300

seq1  TTCAGCATGCTTCCATCTTTTGCCACCTCTGCTCTGTCCTCACTTGCTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCATGCTTCCATCTTTTGCCACCTCTGCTCTGTCCTCACTTGCTAT  350

seq1  GGCTCCAGGAGCTCTTCATATATGTGAATATTGTGGTTTGATTATGGCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCAGGAGCTCTTCATATATGTGAATATTGTGGTTTGATTATGGCTC  400

seq1  ATTGTGTATTTGCTGTGATACAAGCTTCACATGAATTGAGAATACAGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGTATTTGCTGTGATACAAGCTTCACATGAATTGAGAATACAGCTT  450

seq1  GGTTCACTGATGTATTTAATATCCCTAGAAAAACTAGTGGCTCTTCACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCACTGATGTATTTAATATCCCTAGAAAAACTAGTGGCTCTTCACAG  500

seq1  GAGCTCAGGAAATATTGATTGATCAGGAGATATTGATTGAATTGGATGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCAGGAAATATTGATTGATCAGGAGATATTGATTGAATTGGATGTT  550

seq1  CAAAGAAAAAGTTTTCAATAAAGATATTTTAACTTATATATACAACTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAAAAAGTTTTCAATAAAGATATTTTAACTTATATATACAACTTTT  600

seq1  TACAAGTTATCATTATGTTTCTTGATCTATAAAACAGCATCATTTTTGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGTTATCATTATGTTTCTTGATCTATAAAACAGCATCATTTTTGTT  650

seq1  TTTGATATACATAGTGTAGAAACAGGAATATCAATTTTAAAATCTATTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATATACATAGTGTAGAAACAGGAATATCAATTTTAAAATCTATTTT  700

seq1  CTTTGTTGTTGTTGTTATTGTTGTTTCTTTTTGTCTTTTTTTATTAGATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTTGTTGTTGTTATTGTTGTTTCTTTTTGTCTTTTTTTATTAGATG  750

seq1  TTTTCTTCATTTACATTTCAAATGCTATCCTCTTTCCTAGTTTCCTCTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTCATTTACATTTCAAATGCTATCCTCTTTCCTAGTTTCCTCTCT  800

seq1  GAAAATCCCCTACACCCTCCCCCTGCTCCCCAACCTACCCACTTCCACTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCCCCTACACCCTCCCCCTGCTCCCCAACCTACCCACTTCCACTT  850

seq1  CTT-GGCCCTGGCATTCCCCTATACTAGGGCATAAAAACTATTTTCAAAA  899
      ||| |||||||||||||||||||||||||||||||||||||||||| |||
seq2  CTTGGGCCCTGGCATTCCCCTATACTAGGGCATAAAAACTATTTTC-AAA  899

seq1  AAATATAATCTCAAATGATTTTTGATGCTAATACTTTTGAATAATTTGAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATAATCTCAAATGATTTTTGATGCTAATACTTTTGAATAATTTGAA  949

seq1  TTATTTTTAAGAAGCTGTAAGATAAGCTTAATTAGAATAGAAAATGAGTA  999
      |||||||  || ||||||||||| ||||||||||| |||| |||||||| 
seq2  TTATTTT--AGGAGCTGTAAGAT-AGCTTAATTAG-ATAGGAAATGAGT-  994

seq1  AGTATCTATAAACACTTTCATGTTTTAACTTTGTTCAACATGTTTAAATT  1049
      |||||||||||||||||||||||||  |||||| ||||||||||| ||||
seq2  AGTATCTATAAACACTTTCATGTTT--ACTTTG-TCAACATGTTT-AATT  1040

seq1  TTGATTCACTTCTAACTAGAAGAATAATTTGACAAGAGTCCCATTTTCAT  1099
      |||| |||| |||||||||||| || ||||||||||||||| ||||  ||
seq2  TTGA-TCAC-TCTAACTAGAAGGAT-ATTTGACAAGAGTCCAATTTCAAT  1087

seq1  ATTATTTTCAGTTGCTTATGGATCT-CTTACAATTTTTATAC  1140
      |    |||||| ||| ||||||||| ||||  | ||||||||
seq2  A----TTTCAG-TGC-TATGGATCTCCTTAACAATTTTATAC  1123


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