BAC Information

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BAC

Clone NameB6Ng01-325H16
Chromosome4 (Build37)
Map Location 70,548,288 - 70,549,373
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039888, LOC242497, LOC671064, Cdk5rap2, Megf9
Downstream geneLOC100039565, LOC100039979, LOC667638, EG667649
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325H16.bB6Ng01-325H16.g
ACCGA113527GA113528
length1,2581,080
definitionB6Ng01-325H16.b B6Ng01-325H16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgacccccattttttaatggggttatatgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctacctgatttaggataggtaaagatcctttcccattctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
tgaggtcccatttgtcaattctcgatcttacagcacaaaccattgctgtt
ctgttcaggagtttttcccatgtgcccatatcttccaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaatgagataagtatggatcaattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggtttttggttattccagatg
aatttgcaaattgctccttctaattcattgaagaattgagttggaatttt
gttggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatattgatcctcccaatccatgagcatgggagatctttccatctt
ctgagatcatctttaatttctttcttcagagactttaagtttttatcata
ctgatctttcacttccttagttagagtcacgccaggtaccaaagttgaat
cagatcaagttgaccttctaaacagtcccatatcccgttaagaaatagaa
gcagttataatagtctccagccagaaaagcccaggaccagacaggtttag
tgcagagtctatcagaccttcaggaagatctagtcagttttgcacaaact
attttcaagatagaagtgaaagtacctctcacccaactcattttatgaag
cactattacctctgatctaaaccaccggaagatcacaaggatagagactt
cggaccatttctcttatgaagatactagtgtcgcaaaactctctctaata
aatcatcg

gaattctttggttaggacttcatactaatgaacaataagaagaagctaag
cttgtgaacacataaaacttatgtaggtgatacaataagcaatatattta
gcaaggtgactctatcatgccaactactctgtgcacatcttgtggaggcc
tttctctgtgcagttctgtcatgttaacagtagtttaaaaattgaagaca
gcaagaaatggataaaaggctaaaggaagaagagtagggaaataaacatg
ataaaagtgaaaaccagagaatagagcagcattcctacacaggacaattc
tgtggttcctggagaattgcttgatcatgattccataatatggatcttga
gagagcaaagggtaaagagaggcaccagttatgaggagaaagtgccaagg
cctgaaccaatttttattgatatcatgcttatttaaattgtatttatggt
caatttacttaaagtttcagcctagatagttatttattaagagacgttta
ttggattgtggagttgtgttcacagttttatatttgactgatttaggatt
aatacaaaattcttgtctcttcctgtctgaggataaataatggcattttt
caatgcaggtaattattttcaagttactatcatggatataaaaactttag
agaagcaagagaagtaggtaggccaattgcatgtcttcatttctccctca
tatcctccaaatccagtccccagtgtcacatcaaattttgtagcaagcca
cctactgcagtactcttcttctctactccctatctcccagggatcataca
gatcttttcttccaaccttccttcctcagatttatccctttaccccagct
acctactccagcaggaaattctttggaaacccaccagccaaacctgccag
agcaggaagtagccaaagaattaggtagtgaatttcagatcttttccttt
ctaccatatataaacctgaagccccatccctgctctgtagcagacatctg
ttgtggtctttcctaacgctctatccattcccaggacattgggaacatcc
tgaagtagtgaagctttcttccaatctgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_70548288_70549373
seq2: B6Ng01-325H16.g_66_1145

seq1  GAATTCTTTGGTTAGGACTTCATACTAATGAACAATAAGAAGAAGCTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGGTTAGGACTTCATACTAATGAACAATAAGAAGAAGCTAAG  50

seq1  CTTGTGAACACATAAAACTTATGTAGGTGATACAATAAGCAATATATTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGAACACATAAAACTTATGTAGGTGATACAATAAGCAATATATTTA  100

seq1  GCAAGGTGACTCTATCATGCCAACTACTCTGTGCACATCTTGTGGAGGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGTGACTCTATCATGCCAACTACTCTGTGCACATCTTGTGGAGGCC  150

seq1  TTTCTCTGTGCAGTTCTGTCATGTTAACAGTAGTTTAAAAATTGAAGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTGTGCAGTTCTGTCATGTTAACAGTAGTTTAAAAATTGAAGACA  200

seq1  GCAAGAAATGGATAAAAGGCTAAAGGAAGAAGAGTAGGGAAATAAACATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAAATGGATAAAAGGCTAAAGGAAGAAGAGTAGGGAAATAAACATG  250

seq1  ATAAAAGTGAAAACCAGAGAATAGAGCAGCATTCCTACACAGGACAATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGTGAAAACCAGAGAATAGAGCAGCATTCCTACACAGGACAATTC  300

seq1  TGTGGTTCCTGGAGAATTGCTTGATCATGATTCCATAATATGGATCTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTCCTGGAGAATTGCTTGATCATGATTCCATAATATGGATCTTGA  350

seq1  GAGAGCAAAGGGTAAAGAGAGGCACCAGTTATGAGGAGAAAGTGCCAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCAAAGGGTAAAGAGAGGCACCAGTTATGAGGAGAAAGTGCCAAGG  400

seq1  CCTGAACCAATTTTTATTGATATCATGCTTATTTAAATTGTATTTATGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAACCAATTTTTATTGATATCATGCTTATTTAAATTGTATTTATGGT  450

seq1  CAATTTACTTAAAGTTTCAGCCTAGATAGTTATTTATTAAGAGACGTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTACTTAAAGTTTCAGCCTAGATAGTTATTTATTAAGAGACGTTTA  500

seq1  TTGGATTGTGGAGTTGTGTTCACAGTTTTATATTTGACTGATTTAGGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATTGTGGAGTTGTGTTCACAGTTTTATATTTGACTGATTTAGGATT  550

seq1  AATACAAAATTCTTGTCTCTTCCTGTCTGAGGATAAATAATGGCATTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAAAATTCTTGTCTCTTCCTGTCTGAGGATAAATAATGGCATTTTT  600

seq1  CAATGCAGGTAATTATTTTCAAGTTACTATCATGGATATAAAAACTTTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCAGGTAATTATTTTCAAGTTACTATCATGGATATAAAAACTTTAG  650

seq1  AGAAGCAAGAGAAGTAGGTAGGCCAATTGCATGTCTTCATTTCTCCCTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCAAGAGAAGTAGGTAGGCCAATTGCATGTCTTCATTTCTCCCTCA  700

seq1  TATCCTCCAAATCCAGTCCCCAGTGTCACATCAAATTTTGTAGCAAGCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTCCAAATCCAGTCCCCAGTGTCACATCAAATTTTGTAGCAAGCCA  750

seq1  CCTACTGCAGTACTCTTCTTCTCTACTCCCTATCTCCCAGGGATCATACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTGCAGTACTCTTCTTCTCTACTCCCTATCTCCCAGGGATCATACA  800

seq1  GATCTTTTCTTCCAACCTTCCTTCCTCAGATTTATCCCTTTACCCCAGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTTTCTTCCAACCTTCCTTCCTCAGATTTATCCCTTTACCCCAGCT  850

seq1  ACCTACTCCAGCAGG-AATTCTTTGGAAACCCACCAGCCAAACCTGCCAG  899
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ACCTACTCCAGCAGGAAATTCTTTGGAAACCCACCAGCCAAACCTGCCAG  900

seq1  AGCAGGAAGTAGGCCAAAGAATTAGGTAGGTGAATTTCAGATCTTTTTCC  949
      ||||||||||| |||||||||||||||| |||||||||||||| ||||||
seq2  AGCAGGAAGTA-GCCAAAGAATTAGGTA-GTGAATTTCAGATC-TTTTCC  947

seq1  TTTCTACCATATATAAACCTGAAGCCCCATCCCTGCTCTGTAGCAGACAA  999
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTTCTACCATATATAAACCTGAAGCCCCATCCCTGCTCTGTAGCAGAC-A  996

seq1  TCTGTTGTGGTCTTTCCTAACGCTCTATCCCCATTCCCAGGACATTGGGA  1049
      ||||||||||||||||||||||||||||  ||||||||||||||||||||
seq2  TCTGTTGTGGTCTTTCCTAACGCTCTAT--CCATTCCCAGGACATTGGGA  1044

seq1  ACATCCTGGAGTAGTGAAGCTTTCTTCCCAATCTGTA  1086
      |||||||| ||||||||||||||||| ||||||||||
seq2  ACATCCTGAAGTAGTGAAGCTTTCTT-CCAATCTGTA  1080


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