BAC Information

Click to search

BAC

Clone NameB6Ng01-326C03
Chromosome4 (Build37)
Map Location 98,282,876 - 98,427,324
singlet/doubletdoublet
Overlap geneInadl, L1td1, Ankrd38
Upstream geneNfia, LOC100039459, LOC669426, LOC384106, 0610025J13Rik, Tm2d1
Downstream geneLOC100039541, Usp1, Dock7, Angptl3, LOC665193, Atg4c, LOC665212, LOC638890, LOC100042589, Foxd3, Alg6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326C03.bB6Ng01-326C03.g
ACCGA114016GA114017
length1,2021,079
definitionB6Ng01-326C03.b B6Ng01-326C03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,426,098 - 98,427,324)(98,282,876 - 98,283,962)
sequence
gaattctttgagctgagattcaatctcaggcctgactctagaatcattaa
tgttgacgtcatgatttaatgctatcaactggcatctctgtaattaacat
caaaggcatcggaaactctagagggggggaaagagaggccattgctatgc
aaggacagtacctcttcctggatgctgttggagccatcagagtgaccagc
agcaagccaagtggaactcctgcagtcataactcttacacccctgccccc
atttcggagtacttaagaaagcacaggctttcctgtttccacacagattt
aggattagaggatcagggaatgtagtctccttttccaaacatgtagtgag
acagaggatctgtgttgcggagccccctgtgagctgcctaaatctggagt
aattctgaacagtactagcccagggtcgcttagaagtgattactgctctt
gcctggaaaaggcctgagaagagatgcctatgggacaggccaagcaggtc
tgagccttgaagatccctggctggccagaataataaactaggaaatggga
gcctcttttgggcccacatagtggtcacaaataagagagaactacggggc
tttctggaggtagaggaaagccacaagagagacagcttagctatgactgt
tagaactgactttaaactcggcattcataagcttgaatctgagttcagga
acagtgtgccttctgataggtgaacagatcaccctatgtctctgtataca
tctgtaaaatgggtatagcgatgagttacccaaatgcttagtgtttttaa
gccatacctgctggctggaagtgtgacacctagagcaaagtcccaaggat
atcagtagctgggggccttggcatttgtctgctgggtgtaagaggatgaa
gatctgaagtcaggaaagtcaaggagggagactggccccaactgagaagt
cagttggccaccagtcttaattcaatcttgaagtcctcagaatgggtaac
attgctgtccagaggaagtttggtaatgtctgaaagattgggtaggaaga
gccagggcaccacaagacaagccactgcagaacaggcctgggcatgctgg
cattggacttgactgaagaagcagccagtgtgtcttgtaagactcgtagg
atcctccagggtcaaaccacctctgtcctctggtcaggcttgactgagat
tc
gaattcactctgtagaccaggctggcctcaaactcaaaaatctgcttgtc
tctgactcccaacttctgggattaaaggcgtgtgccacaactgccccttt
tgggtggattttaaaacgtgttactactgccgtgtgtggcagcacttagc
tcccaacagtggacactaaggcaagagaaccatgggcccagccagtctgg
gtggcatagtgagactccgtgtgtttaaaagaaggtttggtagaagaagc
tgaaacatggacgaagagtacatggggagtagagaaggaggtgaatgaag
ggacataatagacactgtggggaactagactaagggtacatgagagagag
tagaattctaaactccagcatggctgagtgacatgctgtgggcacttgga
ggtccccgaagcatctgaacgggggatgatcaggccagggttagttgagt
agaaatgttaaaggtatgaggtggcccctgccataaaggcacttgctgca
gagcctgatagcctgcatccaatccctgaaaccacctgggaaccaaagca
cgtactcacatatcataaacaaagaaaacaaacgtttctcaaagaaagat
gcctcaactgaggagggaaacccagttaacatgtcactgcggtgatccca
tagagatcgtcactgcggtgatcccatagagatcgtcactgcggtgatcc
cgtagagatcgtcactgcagtgatcccatagagatcgggagggctcagct
agagccaggatgtagatgttcacgtgatccctccatgaggaggcctggat
cttgtctctgcagcaggagcttctagtttccttttacctcaaggctgtgc
tttctgaatagctgttgagagggactgccagccttggagtgcagaaacag
ttatagagggtcaaccattgccaaatttcccttttaccttttaactgtgc
actgtcttttctggattcttgattatctaatagtaaagttttcagttagg
cagttagagaagattcagtttgttcatatctagtaaaaggaattttcttt
tcaaagaagtagtcagaactcctgctgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_98426098_98427324
seq2: B6Ng01-326C03.b_49_1250 (reverse)

seq1  GAATCCTCAGTCAGGCCTGACCCAGGAGGACAGAGTGTGTTTGAACCCTG  50
      |||| |||||||| ||||||||   |||||||||| ||| ||  ||||||
seq2  GAAT-CTCAGTCAAGCCTGACC--AGAGGACAGAG-GTGGTTTGACCCTG  46

seq1  GATGACTCCTACAAGTCCTGTACAAGACCACACTGGCTGGCTTTCCCTTT  100
      || || |||||| ||||   ||||||| |||||||||| ||||     ||
seq2  GAGGA-TCCTACGAGTC--TTACAAGA-CACACTGGCT-GCTT----CTT  87

seq1  CAGCTCAGCTCCATGCCCAGCACTGGCCCCAGGCCCTGTTCTGCAGTGGC  150
      ||| |||  ||||   |||||| ||  |||||| ||||||||||||||||
seq2  CAG-TCAAGTCCAATGCCAGCA-TG--CCCAGG-CCTGTTCTGCAGTGGC  132

seq1  CTGCTCCTTGGTGCTGCCCTGGCTCTCCCTACCCCAATCTTTCCAGACAT  200
       || ||  | ||| |||||||||||| |||| |||||||||| |||||||
seq2  TTG-TC--TTGTGGTGCCCTGGCTCTTCCTA-CCCAATCTTT-CAGACAT  177

seq1  TACCAAACTTCCTCTGGACAGCAATGTTACCCATTCTGAGGACTTCAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAAACTTCCTCTGGACAGCAATGTTACCCATTCTGAGGACTTCAAGA  227

seq1  TTGAATTAAGACTGGTGGCCAACTGACTTCTCAGTTGGGGGCCAGTCTCC  300
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTGAATTAAGACTGGTGGCCAACTGACTTCTCAGTT-GGGGCCAGTCTCC  276

seq1  CTCCTTGACTTTCCTGACTTCAGATCTTCATCCTCCTTACACCCAGCAGA  350
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTCCTTGACTTTCCTGACTTCAGATCTTCATCCT-CTTACACCCAGCAGA  325

seq1  CAAATGCCAAGGCCCCCAGCTACTGATATCCTTGGGACTTTGCTCTAGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGCCAAGGCCCCCAGCTACTGATATCCTTGGGACTTTGCTCTAGGT  375

seq1  GTCACACTTCCAGCCAGCAGGTATGGCTTAAAAACACTAAGCATTTGGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACACTTCCAGCCAGCAGGTATGGCTTAAAAACACTAAGCATTTGGGT  425

seq1  AACTCATCGCTATACCCATTTTACAGATGTATACAGAGACATAGGGTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCATCGCTATACCCATTTTACAGATGTATACAGAGACATAGGGTGAT  475

seq1  CTGTTCACCTATCAGAAGGCACACTGTTCCTGAACTCAGATTCAAGCTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCACCTATCAGAAGGCACACTGTTCCTGAACTCAGATTCAAGCTTA  525

seq1  TGAATGCCGAGTTTAAAGTCAGTTCTAACAGTCATAGCTAAGCTGTCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGCCGAGTTTAAAGTCAGTTCTAACAGTCATAGCTAAGCTGTCTCT  575

seq1  CTTGTGGCTTTCCTCTACCTCCAGAAAGCCCCGTAGTTCTCTCTTATTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGGCTTTCCTCTACCTCCAGAAAGCCCCGTAGTTCTCTCTTATTTG  625

seq1  TGACCACTATGTGGGCCCAAAAGAGGCTCCCATTTCCTAGTTTATTATTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCACTATGTGGGCCCAAAAGAGGCTCCCATTTCCTAGTTTATTATTC  675

seq1  TGGCCAGCCAGGGATCTTCAAGGCTCAGACCTGCTTGGCCTGTCCCATAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAGCCAGGGATCTTCAAGGCTCAGACCTGCTTGGCCTGTCCCATAG  725

seq1  GCATCTCTTCTCAGGCCTTTTCCAGGCAAGAGCAGTAATCACTTCTAAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTCTTCTCAGGCCTTTTCCAGGCAAGAGCAGTAATCACTTCTAAGC  775

seq1  GACCCTGGGCTAGTACTGTTCAGAATTACTCCAGATTTAGGCAGCTCACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTGGGCTAGTACTGTTCAGAATTACTCCAGATTTAGGCAGCTCACA  825

seq1  GGGGGCTCCGCAACACAGATCCTCTGTCTCACTACATGTTTGGAAAAGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGCTCCGCAACACAGATCCTCTGTCTCACTACATGTTTGGAAAAGGA  875

seq1  GACTACATTCCCTGATCCTCTAATCCTAAATCTGTGTGGAAACAGGAAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTACATTCCCTGATCCTCTAATCCTAAATCTGTGTGGAAACAGGAAAG  925

seq1  CCTGTGCTTTCTTAAGTACTCCGAAATGGGGGCAGGGGTGTAAGAGTTAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGCTTTCTTAAGTACTCCGAAATGGGGGCAGGGGTGTAAGAGTTAT  975

seq1  GACTGCAGGAGTTCCACTTGGCTTGCTGCTGGTCACTCTGATGGCTCCAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGCAGGAGTTCCACTTGGCTTGCTGCTGGTCACTCTGATGGCTCCAA  1025

seq1  CAGCATCCAGGAAGAGGTACTGTCCTTGCATAGCAATGGCCTCTCTTTCC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATCCAGGAAGAGGTACTGTCCTTGCATAGCAATGGCCTCTCTTTCC  1075

seq1  CCCCCTCTAGAGTTTCCGATGCCTTTGATGTTAATTACAGAGATGCCAGT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTCTAGAGTTTCCGATGCCTTTGATGTTAATTACAGAGATGCCAGT  1125

seq1  TGATAGCATTAAATCATGACGTCAACATTAATGATTCTAGAGTCAGGCCT  1200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGCATTAAATCATGACGTCAACATTAATGATTCTAGAGTCAGGCCT  1175

seq1  GAGATTGAATCTCAGCTCAAAGAATTC  1227
      |||||||||||||||||||||||||||
seq2  GAGATTGAATCTCAGCTCAAAGAATTC  1202

seq1: chr4_98282876_98283962
seq2: B6Ng01-326C03.g_63_1141

seq1  GAATTCACTCTGTAGACCAGGCTGGCCTCAAACTCAAAAATCTGCTTGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGTAGACCAGGCTGGCCTCAAACTCAAAAATCTGCTTGTC  50

seq1  TCTGACTCCCAACTTCTGGGATTAAAGGCGTGTGCCACAACTGCCCCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACTCCCAACTTCTGGGATTAAAGGCGTGTGCCACAACTGCCCCTTT  100

seq1  TGGGTGGATTTTAAAACGTGTTACTACTGCCGTGTGTGGCAGCACTTAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGGATTTTAAAACGTGTTACTACTGCCGTGTGTGGCAGCACTTAGC  150

seq1  TCCCAACAGTGGACACTAAGGCAAGAGAACCATGGGCCCAGCCAGTCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAACAGTGGACACTAAGGCAAGAGAACCATGGGCCCAGCCAGTCTGG  200

seq1  GTGGCATAGTGAGACTCCGTGTGTTTAAAAGAAGGTTTGGTAGAAGAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCATAGTGAGACTCCGTGTGTTTAAAAGAAGGTTTGGTAGAAGAAGC  250

seq1  TGAAACATGGACGAAGAGTACATGGGGAGTAGAGAAGGAGGTGAATGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACATGGACGAAGAGTACATGGGGAGTAGAGAAGGAGGTGAATGAAG  300

seq1  GGACATAATAGACACTGTGGGGAACTAGACTAAGGGTACATGAGAGAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATAATAGACACTGTGGGGAACTAGACTAAGGGTACATGAGAGAGAG  350

seq1  TAGAATTCTAAACTCCAGCATGGCTGAGTGACATGCTGTGGGCACTTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTCTAAACTCCAGCATGGCTGAGTGACATGCTGTGGGCACTTGGA  400

seq1  GGTCCCCGAAGCATCTGAACGGGGGATGATCAGGCCAGGGTTAGTTGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCCGAAGCATCTGAACGGGGGATGATCAGGCCAGGGTTAGTTGAGT  450

seq1  AGAAATGTTAAAGGTATGAGGTGGCCCCTGCCATAAAGGCACTTGCTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGTTAAAGGTATGAGGTGGCCCCTGCCATAAAGGCACTTGCTGCA  500

seq1  GAGCCTGATAGCCTGCATCCAATCCCTGAAACCACCTGGGAACCAAAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTGATAGCCTGCATCCAATCCCTGAAACCACCTGGGAACCAAAGCA  550

seq1  CGTACTCACATATCATAAACAAAGAAAACAAACGTTTCTCAAAGAAAGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTACTCACATATCATAAACAAAGAAAACAAACGTTTCTCAAAGAAAGAT  600

seq1  GCCTCAACTGAGGAGGGAAACCCAGTTAACATGTCACTGCGGTGATCCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAACTGAGGAGGGAAACCCAGTTAACATGTCACTGCGGTGATCCCA  650

seq1  TAGAGATCGTCACTGCGGTGATCCCATAGAGATCGTCACTGCGGTGATCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGATCGTCACTGCGGTGATCCCATAGAGATCGTCACTGCGGTGATCC  700

seq1  CGTAGAGATCGTCACTGCAGTGATCCCATAGAGATCGGGAGGGCTCAGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGAGATCGTCACTGCAGTGATCCCATAGAGATCGGGAGGGCTCAGCT  750

seq1  AGAGCCAGGATGTAGATGTTCACGTGATCCCTCCATGAGGAGGCCTGGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCAGGATGTAGATGTTCACGTGATCCCTCCATGAGGAGGCCTGGAT  800

seq1  CTTGTCTCTGCAGCAGGAGCTTCTAGTTTCCTTTTACCTCAAGGCTGTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCTCTGCAGCAGGAGCTTCTAGTTTCCTTTTACCTCAAGGCTGTGC  850

seq1  TTTCTGAATAGCTGTTGAGAGGGACTGCCAGCCTTGGAGTGCAGAAACAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGAATAGCTGTTGAGAGGGACTGCCAGCCTTGGAGTGCAGAAACAG  900

seq1  TTATAGAGGGTCAACCATTGCCAAAATTTCCCTTTTACC-TTTAACTGTG  949
      |||||||||||||||||||||| |||||||||||||||| ||||||||||
seq2  TTATAGAGGGTCAACCATTGCC-AAATTTCCCTTTTACCTTTTAACTGTG  949

seq1  CACTGTC-TTTCTGGAATTCTGATTTATCTAATAGTAAAGGTTTTCAGGT  998
      ||||||| ||||||| |||||   ||||||||||||||| |||||||| |
seq2  CACTGTCTTTTCTGG-ATTCTTGATTATCTAATAGTAAA-GTTTTCAGTT  997

seq1  AAGCAGTTAGGAGAAGGAAATTCAGTTTG-TCATATCTAGTAAACAGAAT  1047
      | ||||||| ||||||   |||||||||| ||||||||||||||  ||||
seq2  AGGCAGTTA-GAGAAG---ATTCAGTTTGTTCATATCTAGTAAAAGGAAT  1043

seq1  TTTCTTTTTCAAAAAGAAGTATTTAAGAACTTCTGCTGTG  1087
      ||||||||    |||||||||  | |||||| ||||||||
seq2  TTTCTTTT---CAAAGAAGTA-GTCAGAACTCCTGCTGTG  1079