BAC Information

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BAC

Clone NameB6Ng01-326N03
Chromosome4 (Build37)
Map Location 16,125,481 - 16,126,625
singlet/doubletsinglet
Overlap genenone
Upstream geneTmem64, LOC100040095, LOC633695, Calb1, Decr1, Nbn, Osgin2, Ripk2
Downstream geneLOC667150, LOC383994, LOC100040154, LOC667212
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326N03.bB6Ng01-326N03.g
ACCGA114536GA114537
length9941,072
definitionB6Ng01-326N03.b B6Ng01-326N03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaacagaagggtagcaagaaacctgacaacagtgtcagtgtca
gggataggggaattaaatgcaaaaaggattcaacccaccattgctggctt
tcaacatgggaaaaagaaaaaggaaaaagagaaatgaactgtaggtatct
tccagaaaagagaagagcagagcaaggaaatgaatgctcctgtgacttct
ctaaaggatcctctgctgagatgctgattttagtataatgtgacctaatt
cagatttctagaattaattataagatagtaggattaaattgttttaaacc
agcaggctttggcaatttgaaagaatatcaataggaaatgattgtttctc
tttagcaaggctctttttgatcaattttctatgtatcagtgtctgtggtg
tcaatgttagatgtcaacacagaccaatcaatatgttgcaactaaggatt
ttagcagataggagtattagctcttacttagtcgtttttagtggagaagg
ggaaaccagattaaccataaccatgttctctttctggattgtattctact
gaagtacaagttcaaaatactggggaaattcccactccactgccaacaca
gaccttagctagcaataggtttatctacagccatgccagggtttccccat
ttcctcatagctatggctagctttcaagatcaacatctactgagcacatg
gtatgtgtggtggttatatttagtgctttgaatatattgtcttagttagt
tctgtcaaaattctgatgtgggtcaaagaatcataattgtgcgtttttaa
aatgtcagtcatggctcattaagttttctaccagttttgtgggggattat
tagcagcttgaaatagcatgggatataaccagttcattgcttggaataag
agtaggtttactttcataatattttagtttcaaatctacatatattagca
tgtatatcatagttgctaatatgtatttgtttagtggattgtat

gaattctttgtttagctctgtaccccatttttaatggggttatttgattt
tctggagtccagcttcttgagttctttgtatatattggatattagtcccc
tatcagatttaggattggtaaagatcctttcccaatctgttggtggcctt
tttgtcttactgacaatgtcttttgctttacagaagctttgcaattttat
gaggtcccatttgtcgattctcaatcttacagcacaagccattgctgttc
tgttcaggaatttttcccctgtgcccttatctttgaggatttcccccttc
tcctctataagtttaagtgtttctggttttacaagaagttccttgatcca
cttagacatgagttttgtacaatgagatcaattcccattcttctacatga
tgactgtcagttgagccagcaccatttgttgaaaatgctttttcccactg
gatggttttagctgccttgtcaaagatcaagtgaccaaaggtgtgtgggt
tcatttctgggtcttcaattacattatattgttctgcctgtctattgctg
taccagtactattcactttttatcacaattcctctgtaatacagcttgag
gtaaggcatggtgattccaccagaagttcttttattgttgagaatatttt
gtgctatcctagtttttttttttgttattccagatgaatttgcaaattgt
cctttctaattctttgaagaattgagttggaattttgatggggaatgcat
ttgatgggaatctgtagattgctttaggcaagacagtctttttgactata
ttaattcctagctgtccatgagcatgtgagttctttccatcttttttgag
atctttcagtatctttcttcagacacttgaaagttccttatcatacagat
ctttcactttttttagttagagccacccacaggtatcttaatattatatg
tgactattgttgaagttgttggtttctcaatttcttgtttcatgcttttt
attccttgtgtataagaaatggccatatgatttgttcgattttaattttt
ttatccagatacccgcacatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_16125481_16126625
seq2: B6Ng01-326N03.b_49_1121

seq1  GAATTCAAAACAGAAGGGTAGCAAGAAACCTGACAACAGTGTCAGTGTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAACAGAAGGGTAGCAAGAAACCTGACAACAGTGTCAGTGTCA  50

seq1  GGGATAGGGGAATTAAATGCAAAAAGGATTCAACCCACCATTGCTGGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATAGGGGAATTAAATGCAAAAAGGATTCAACCCACCATTGCTGGCTT  100

seq1  TCAACATGGGAAAAAGAAAAAGGAAAAAGAGAAATGAACTGTAGGTATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACATGGGAAAAAGAAAAAGGAAAAAGAGAAATGAACTGTAGGTATCT  150

seq1  TCCAGAAAAGAGAAGAGCAGAGCAAGGAAATGAATGCTCCTGTGACTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAAAAGAGAAGAGCAGAGCAAGGAAATGAATGCTCCTGTGACTTCT  200

seq1  CTAAAGGATCCTCTGCTGAGATGCTGATTTTAGTATAATGTGACCTAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGGATCCTCTGCTGAGATGCTGATTTTAGTATAATGTGACCTAATT  250

seq1  CAGATTTCTAGAATTAATTATAAGATAGTAGGATTAAATTGTTTTAAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTTCTAGAATTAATTATAAGATAGTAGGATTAAATTGTTTTAAACC  300

seq1  AGCAGGCTTTGGCAATTTGAAAGAATATCAATAGGAAATGATTGTTTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGCTTTGGCAATTTGAAAGAATATCAATAGGAAATGATTGTTTCTC  350

seq1  TTTAGCAAGGCTCTTTTTGATCAATTTTCTATGTATCAGTGTCTGTGGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCAAGGCTCTTTTTGATCAATTTTCTATGTATCAGTGTCTGTGGTG  400

seq1  TCAATGTTAGATGTCAACACAGACCAATCAATATGTTGCAACTAAGGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGTTAGATGTCAACACAGACCAATCAATATGTTGCAACTAAGGATT  450

seq1  TTAGCAGATAGGAGTATTAGCTCTTACTTAGTCGTTTTTAGTGGAGAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAGATAGGAGTATTAGCTCTTACTTAGTCGTTTTTAGTGGAGAAGG  500

seq1  GGAAACCAGATTAACCATAACCATGTTCTCTTTCTGGATTGTATTCTACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACCAGATTAACCATAACCATGTTCTCTTTCTGGATTGTATTCTACT  550

seq1  GAAGTACAAGTTCAAAATACTGGGGAAATTCCCACTCCACTGCCAACACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTACAAGTTCAAAATACTGGGGAAATTCCCACTCCACTGCCAACACA  600

seq1  GACCTTAGCTAGCAATAGGTTTATCTACAGCCATGCCAGGGTTTCCCCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTAGCTAGCAATAGGTTTATCTACAGCCATGCCAGGGTTTCCCCAT  650

seq1  TTCCTCATAGCTATGGCTAGCTTTCAAGATCAACATCTACTGAGCACATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCATAGCTATGGCTAGCTTTCAAGATCAACATCTACTGAGCACATG  700

seq1  GTATGTGTGGTGGTTATATTTAGTGCTTTGAATATATTGTCTTAGTTAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTGTGGTGGTTATATTTAGTGCTTTGAATATATTGTCTTAGTTAGT  750

seq1  TCTGTCAAAATTCTGATGTGGGTCAAAGAATCATAATTGTGCGTTTTTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCAAAATTCTGATGTGGGTCAAAGAATCATAATTGTGCGTTTTTAA  800

seq1  AATGTCAGGTCATGGCTCATTAAGTTTTCTACCAGTTTTGTGGGGGATTA  850
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCA-GTCATGGCTCATTAAGTTTTCTACCAGTTTTGTGGGGGATTA  849

seq1  TTAGCAGCTTGAAATAGCATGGGATATAACCAGTTCATTGCTTGGAATAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAGCTTGAAATAGCATGGGATATAACCAGTTCATTGCTTGGAATAA  899

seq1  GAGTAGGTTTACTTTCATAAAATTTTAGTTTCAAATCTACATATAATAGC  950
      |||||||||||||||||||| |||||||||||||||||||||||| ||||
seq2  GAGTAGGTTTACTTTCATAATATTTTAGTTTCAAATCTACATATATTAGC  949

seq1  ATGTATATCATAGTTGCTAATATGTATTTGTTTAGTGGATTGTATTAAAA  1000
      |||||||||||||||||||||||||||||||||||||||||||||     
seq2  ATGTATATCATAGTTGCTAATATGTATTTGTTTAGTGGATTGTAT--NNN  997

seq1  ACACACTTCCTGCCTTTGGTTGTATTTCTTACAATGGGTTAAAGATTTTT  1050
                    ||||||||| |||| |||||| ||| ||||||||||
seq2  NNNNNNNNNNNNNNTTTGGTTGT-TTTCCTACAAT-GGTAAAAGATTTTT  1045

seq1  AAACAACCAATGAAATGTAAGAATGTTGTCTCCAGTTACATCCAGTCAGA  1100
      |||||||| ||| |||||||||||  |||                     
seq2  AAACAACC-ATGGAATGTAAGAATTGTGT---------------------  1073

seq1  TTCCTGCTTTGTCTAAAATAATTTACACTTTTAGCCACAATGTGT  1145
                                                   
seq2  ---------------------------------------------  1073


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