BAC Information

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BAC

Clone NameB6Ng01-329E08
Chromosome4 (Build37)
Map Location 89,632,041 - 89,633,217
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040617, Mtap, LOC625574, Cdkn2a, Cdkn2b, LOC664785, Dmrta1
Downstream geneZfp352, LOC619842, LOC435792, Ppia-ps4_804.1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-329E08.bB6Ng01-329E08.g
ACCGA116283GA116284
length1,1781,156
definitionB6Ng01-329E08.b B6Ng01-329E08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgttatgttgcaggggagcttcagggagtccataaagggtgagt
gatccttactgagcagctggactgtcatcatcatcactggcttttatggt
accagatgaggcactttcctggaagaaatctcttcagtgtttttgattca
ggctgtgaatatcttcttttaatgtttgcaattcataattaactatttag
aatagggggagtgttaaaatataaaatgaatgcagtccttcctggggatg
attatttgatttctaattgttccttacaatacagctgtgcaaaaaaaaat
ttttttttgagtcctggtggttgagggtaagggaaagattttcttttttc
cagcgatctgggtagaagctagtgagtgctttgcaaagggttattacttc
tagtcattgcatgatccatcacggttttgtgacttgagagcagactacaa
tgcaaagctggagtcatcgtctgctactgaaaaagaaaaggcaaatgaaa
gatgtaaaagtgagtgagactttggcatgaggtattttgttgctttcata
agccagtggaggcagagacctaagagtgacttcttttttcttgtttgttt
ttgttttaatgattagaaatattgttttcatttttttctgcctgggagga
ttctctatagatttgctaaaatagtatttaccacatcaaataccagctcc
atatttttctgttgtaggaagtgaagttgttcacttttcaaggacatgcc
tggctatgtttccttcccttcctcatcttccagtatttgtaaattctgtc
tctcctcagtaattctacatccatttgcttgtagaagcaaatctaatttt
cccagaagatacctatatgacagcatgcctgtccacttttttttttttca
atacattctacagtgttgattttaaagacatgcaaaccaatcagctgttg
tattaatagcaggtcccctgataaacctttgtcttgtaaaaatacagata
gtcaggaataaccttaaaaagacaaatctgagccttttcctcctgttctt
agaagaagtattttagtctctgcaatgaaagactgctttattgtcacaga
aaataggaagaaaaagcagagatcccagaccatataataatattgactta
gattactgttgaatagttttctatcatt

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactatcggaggatccagcaatacctcttctgggc
atatatccagaagatgtcccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagagtgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaacacacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgtccctccttagaagtgggga
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggtccatgtagagattgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctatctcttgtgagactatgcccggggcctagcaaa
cacagaagtggatgctcacagcccagctaatggatggatcacagggctcc
caatggaggagctagagaagacccaaggagctaagagatctgaaacctat
agtgacacattatgactaaccagtacccgagctcttgactctagctgcat
atgtattcaaaggatggctagttcggcatcacttgaaagaaagtccatgc
aacgctactgcatgccagtaggcatgtcatggctcagagcggaattggct
tgtcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_89632041_89633217
seq2: B6Ng01-329E08.b_45_1222

seq1  GAATTCTGTTATGTTGCAGGGGAGCTTCAGGGAGTCCATAAAGGGTGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTATGTTGCAGGGGAGCTTCAGGGAGTCCATAAAGGGTGAGT  50

seq1  GATCCTTACTGAGCAGCTGGACTGTCATCATCATCACTGGCTTTTATGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTTACTGAGCAGCTGGACTGTCATCATCATCACTGGCTTTTATGGT  100

seq1  ACCAGATGAGGCACTTTCCTGGAAGAAATCTCTTCAGTGTTTTTGATTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGATGAGGCACTTTCCTGGAAGAAATCTCTTCAGTGTTTTTGATTCA  150

seq1  GGCTGTGAATATCTTCTTTTAATGTTTGCAATTCATAATTAACTATTTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTGAATATCTTCTTTTAATGTTTGCAATTCATAATTAACTATTTAG  200

seq1  AATAGGGGGAGTGTTAAAATATAAAATGAATGCAGTCCTTCCTGGGGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGGGGAGTGTTAAAATATAAAATGAATGCAGTCCTTCCTGGGGATG  250

seq1  ATTATTTGATTTCTAATTGTTCCTTACAATACAGCTGTGCAAAAAAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTGATTTCTAATTGTTCCTTACAATACAGCTGTGCAAAAAAAAAT  300

seq1  TTTTTTTTGAGTCCTGGTGGTTGAGGGTAAGGGAAAGATTTTCTTTTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTGAGTCCTGGTGGTTGAGGGTAAGGGAAAGATTTTCTTTTTTC  350

seq1  CAGCGATCTGGGTAGAAGCTAGTGAGTGCTTTGCAAAGGGTTATTACTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGATCTGGGTAGAAGCTAGTGAGTGCTTTGCAAAGGGTTATTACTTC  400

seq1  TAGTCATTGCATGATCCATCACGGTTTTGTGACTTGAGAGCAGACTACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCATTGCATGATCCATCACGGTTTTGTGACTTGAGAGCAGACTACAA  450

seq1  TGCAAAGCTGGAGTCATCGTCTGCTACTGAAAAAGAAAAGGCAAATGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAGCTGGAGTCATCGTCTGCTACTGAAAAAGAAAAGGCAAATGAAA  500

seq1  GATGTAAAAGTGAGTGAGACTTTGGCATGAGGTATTTTGTTGCTTTCATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTAAAAGTGAGTGAGACTTTGGCATGAGGTATTTTGTTGCTTTCATA  550

seq1  AGCCAGTGGAGGCAGAGACCTAAGAGTGACTTCTTTTTTCTTGTTTGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGTGGAGGCAGAGACCTAAGAGTGACTTCTTTTTTCTTGTTTGTTT  600

seq1  TTGTTTTAATGATTAGAAATATTGTTTTCATTTTTTTCTGCCTGGGAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTAATGATTAGAAATATTGTTTTCATTTTTTTCTGCCTGGGAGGA  650

seq1  TTCTCTATAGATTTGCTAAAATAGTATTTACCACATCAAATACCAGCTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTATAGATTTGCTAAAATAGTATTTACCACATCAAATACCAGCTCC  700

seq1  ATATTTTTCTGTTGTAGGAAGTGAAGTTGTTCACTTTTCAAGGACATGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTTCTGTTGTAGGAAGTGAAGTTGTTCACTTTTCAAGGACATGCC  750

seq1  TGGCTATGTTTCCTTCCCTTCCTCATCTTCCAGTATTTGTAAATTCTGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTATGTTTCCTTCCCTTCCTCATCTTCCAGTATTTGTAAATTCTGTC  800

seq1  TCTCCTCAGTAATTCTACATCCATTTGCTTGTAGAAGCAAATCTAATTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCAGTAATTCTACATCCATTTGCTTGTAGAAGCAAATCTAATTTT  850

seq1  CCAAGAAGATACCTATATGACAGCATGCCTGTCCAC-TTTTTTTTTTTCA  899
      || ||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CCCAGAAGATACCTATATGACAGCATGCCTGTCCACTTTTTTTTTTTTCA  900

seq1  ATACATTCTACAGTGTTGA-TTTAAAGACATGCAAACCAATCAGCTGTTG  948
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATACATTCTACAGTGTTGATTTTAAAGACATGCAAACCAATCAGCTGTTG  950

seq1  TATTAATAGCAGGGCCCCTGATAAACC-TTGTC-TGTTAAAATACAGATA  996
      ||||||||||||| ||||||||||||| ||||| ||| ||||||||||||
seq2  TATTAATAGCAGGTCCCCTGATAAACCTTTGTCTTGTAAAAATACAGATA  1000

seq1  GTCA-GAATAA-CTTAAAAAGACAAATCTGAGCC-TTTCCTCCTGT--CT  1041
      |||| |||||| |||||||||||||||||||||| |||||||||||   |
seq2  GTCAGGAATAACCTTAAAAAGACAAATCTGAGCCTTTTCCTCCTGTTCTT  1050

seq1  AGA--GAGTATTTTAGTCTCCTGCATGGAAGGACTGCTTTATTGGCACAG  1089
      |||   ||||||||||||| |||||  ||| ||||||||||||| |||||
seq2  AGAAGAAGTATTTTAGTCT-CTGCAATGAAAGACTGCTTTATTGTCACAG  1099

seq1  AAAATAGGGAG-AAAAGCAGAGATTCCCAGAACAATTATAAATAAATAAT  1138
      |||||||| || ||||||||||| ||||||| ||  ||| |||||   ||
seq2  AAAATAGGAAGAAAAAGCAGAGA-TCCCAGACCA--TAT-AATAA--TAT  1143

seq1  TGACTTTAGAATACCATTTTAAAATAATTTTCTATCATT  1177
      |||| ||||| |||   | |  |||| ||||||||||||
seq2  TGAC-TTAGATTAC---TGTTGAATAGTTTTCTATCATT  1178


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