BAC Information

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BAC

Clone NameB6Ng01-331D10
Chromosome4 (Build37)
Map Location 3,653,285 - 3,654,381
singlet/doubletsinglet
Overlap geneLyn
Upstream geneLOC100039124, LOC100039141, EG666464, LOC100039044, LOC631371, LOC666513, Tmem68, Tgs1, LOC621858
Downstream geneRps20, Mos, Plag1, Chchd7, LOC666586, Rdhe2, 4833413O15Rik, Penk1, A830012C17Rik, LOC100039297, LOC622019
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-331D10.bB6Ng01-331D10.g
ACCGA117649GA117650
length1,0961,206
definitionB6Ng01-331D10.b B6Ng01-331D10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccattgtaggtgacacttaagctggatgtagaattattcactatc
ctttattcctttgctcacccctctcatgaatgtctcggtgtcccttctgg
cctccaggatggacagctttttcttttggacatttgttcttgaactcctt
ccagacgaccagtgaagcagtgctcccaggaatttgttaaaggttgtgat
gggcagacgagttgctgtatttatgtgctatagtttcaagctgcctcagc
atcagctcctgtaatctgtccacggcatagctaactgcacagttctggat
ctatggctctgtgtgaggcctgtgacacagaataaaaacaacaatttcaa
attcgacagactctactctagagagaagatctggcttaggtataaaaacc
taaattttaaagaatgcatggaacatgtacaatctttgtcaattgcaata
ttttggaattaaaaggagacaaaaataaactgaaaatggtagtacccagc
taaaatataatcctagcatttggaaagtagagtcctgaggatcacaagtt
caaggtcacaatctcacaactctctttccccaaactaccagtactgaaac
gcacacacacacattctaacactaaagataaaagtttattctagagccaa
atttgagtaaccatgacccagaaacatggatttaggttaccccaaattca
aaattttgatgttttacaaaaccaagaaagtcataaatcaagggcaattt
gtacctctctgtgtacatcagagaggtagatagcacaagctgtggcaagc
ctttcaatagatctgagatgctatctgatgacgtccatagctttcaggtt
ggtgagtagtctgctatgttaatacattccaaaaggtttctacctgtaag
tcaaaggatgttcgttccgatacagaggtggtccaggggctaaagctgga
gataagacaaacctctgggcctgcggccttccagctctggacatcactcc
agctctgtcagtcagtcatctctgcagaacacggcttatttcctggaatt
gtcaccaacacagatactcaggaagaacctgcagttcacgccacct

gaattccaaaacaatgcagcctattgctattgctcctggctgaccaccag
aactagatggtaagatcttattgttgatgcatgagttggtttcaagataa
agataaagataaaggtaaaggtaaaggtaaaggtaaaggtaaaggtaaag
gtaaaggtaaaggtaaaggtaaaggtaaaggtaaaggtaaagaaagagat
cactctggaagaaacctgaaaagttcctcagtgctgactactttcataat
tcccaaatgtgctgtgtaggctactgggggagaaaagttcttggtaccca
atagagaaccgagtgctggactccaacacaccaggcaagatgtgttcatt
ggtacaatatggggtgagcaactgcttcctgattggatctgaggtttgct
tcacagcagggaatttatatctactactgtgaacccagtccattgaaagc
tacagtggggacctactattgctattgctgaatgatcatgttgtcaaatg
ctcttctaaatatttctgtttgatcccatagattagtgatgtgccttgat
cagagaagcttctttgtgcagcagaccagcagtgcagagcccaaggatgg
ggaagaggctataagatgctgtcttctggacatggcatggctactgtgct
caggaatttgcagccgttgtggttagctgcttttggaatcacttgactcc
aagtaaagaagtcaattgagagctaaaagaagttgcactgactgcaggcc
aatcaagcagcatcacccagcactgagtctcccaatttatgaacatagct
atatgtccatgtatctttgtcttctacacttctttcatcaatggttcgta
gcttcccaagtatggcagttgggctgccttctatggaactcacatttaaa
ttaatttattcttattgatgctgttacaaatgttattgttttcctgttgc
tactacttatggggagcagcatggctgactcctgtgtgcaaatgatacag
tacccgtagtacctgttctttttgcagtgttgttagtattattcatagat
tgtcttgtctatgaagttattctaatgggtgccaattccagaaggacaca
cattcagcttcgatctttggctttacttggttctcttaatcgaatactct
ggaagaatgttttcttggttaacagtgccttgtagatggccaaaagggtg
acctag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_3653285_3654381
seq2: B6Ng01-331D10.b_47_1142

seq1  GAATTCCATTGTAGGTGACACTTAAGCTGGATGTAGAATTATTCACTATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTGTAGGTGACACTTAAGCTGGATGTAGAATTATTCACTATC  50

seq1  CTTTATTCCTTTGCTCACCCCTCTCATGAATGTCTCGGTGTCCCTTCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTCCTTTGCTCACCCCTCTCATGAATGTCTCGGTGTCCCTTCTGG  100

seq1  CCTCCAGGATGGACAGCTTTTTCTTTTGGACATTTGTTCTTGAACTCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAGGATGGACAGCTTTTTCTTTTGGACATTTGTTCTTGAACTCCTT  150

seq1  CCAGACGACCAGTGAAGCAGTGCTCCCAGGAATTTGTTAAAGGTTGTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACGACCAGTGAAGCAGTGCTCCCAGGAATTTGTTAAAGGTTGTGAT  200

seq1  GGGCAGACGAGTTGCTGTATTTATGTGCTATAGTTTCAAGCTGCCTCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGACGAGTTGCTGTATTTATGTGCTATAGTTTCAAGCTGCCTCAGC  250

seq1  ATCAGCTCCTGTAATCTGTCCACGGCATAGCTAACTGCACAGTTCTGGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCTCCTGTAATCTGTCCACGGCATAGCTAACTGCACAGTTCTGGAT  300

seq1  CTATGGCTCTGTGTGAGGCCTGTGACACAGAATAAAAACAACAATTTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGCTCTGTGTGAGGCCTGTGACACAGAATAAAAACAACAATTTCAA  350

seq1  ATTCGACAGACTCTACTCTAGAGAGAAGATCTGGCTTAGGTATAAAAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCGACAGACTCTACTCTAGAGAGAAGATCTGGCTTAGGTATAAAAACC  400

seq1  TAAATTTTAAAGAATGCATGGAACATGTACAATCTTTGTCAATTGCAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTTAAAGAATGCATGGAACATGTACAATCTTTGTCAATTGCAATA  450

seq1  TTTTGGAATTAAAAGGAGACAAAAATAAACTGAAAATGGTAGTACCCAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGAATTAAAAGGAGACAAAAATAAACTGAAAATGGTAGTACCCAGC  500

seq1  TAAAATATAATCCTAGCATTTGGAAAGTAGAGTCCTGAGGATCACAAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATATAATCCTAGCATTTGGAAAGTAGAGTCCTGAGGATCACAAGTT  550

seq1  CAAGGTCACAATCTCACAACTCTCTTTCCCCAAACTACCAGTACTGAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTCACAATCTCACAACTCTCTTTCCCCAAACTACCAGTACTGAAAC  600

seq1  GCACACACACACATTCTAACACTAAAGATAAAAGTTTATTCTAGAGCCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACACACACATTCTAACACTAAAGATAAAAGTTTATTCTAGAGCCAA  650

seq1  ATTTGAGTAACCATGACCCAGAAACATGGATTTAGGTTACCCCAAATTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAGTAACCATGACCCAGAAACATGGATTTAGGTTACCCCAAATTCA  700

seq1  AAATTTTGATGTTTTACAAAACCAAGAAAGTCATAAATCAAGGGCAATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTGATGTTTTACAAAACCAAGAAAGTCATAAATCAAGGGCAATTT  750

seq1  GTACCTCTCTGTGTACATCAGAGAGGTAGATAGCACAAGCTGTGGCAAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCTCTCTGTGTACATCAGAGAGGTAGATAGCACAAGCTGTGGCAAGC  800

seq1  CTTTCAATAGATCTGAGATGCTATCTGATGACGTCCATAGCTTTCAGGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAATAGATCTGAGATGCTATCTGATGACGTCCATAGCTTTCAGGTT  850

seq1  GGTGAGTAGTCTGCTATGTTAATACATTCCAAAAGGTTTCTACCTGTAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGTAGTCTGCTATGTTAATACATTCCAAAAGGTTTCTACCTGTAAG  900

seq1  TCAAAGGATGTTCGTTCCGATACAGAGGTGGTCCAGGGGCTAAAGCTGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGGATGTTCGTTCCGATACAGAGGTGGTCCAGGGGCTAAAGCTGGA  950

seq1  GATAAGACAAACCTCTGGGCCTGCGGCCTTCCAGCCTCTGGACATCACTC  1000
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GATAAGACAAACCTCTGGGCCTGCGGCCTTCCAG-CTCTGGACATCACTC  999

seq1  CAGCTCTGTCAGTCAGTCCATCTCTGCAG-ACACGGCTTA-TTCCTGGAA  1048
      ||||||||||||||||| ||||||||||| |||||||||| |||||||||
seq2  CAGCTCTGTCAGTCAGT-CATCTCTGCAGAACACGGCTTATTTCCTGGAA  1048

seq1  TTGTCACCAACACCAGATACTCAGG-AGAA-CTGCAAGTTCACGGCCACC  1096
      |||||||||||| |||||||||||| |||| |||| ||||||| ||||||
seq2  TTGTCACCAACA-CAGATACTCAGGAAGAACCTGC-AGTTCAC-GCCACC  1095

seq1  T  1097
      |
seq2  T  1096


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