BAC Information

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BAC

Clone NameB6Ng01-331K18
Chromosome4 (Build37)
Map Location 57,734,779 - 57,735,891
singlet/doubletsinglet
Overlap genenone
Upstream geneActl7b, Actl7a, Ikbkap, BC026590, Ctnnal1, D730040F13Rik, 6430704M03Rik, Epb4.1l4b, Ptpn3, LOC100041460, 1700042G15Rik, LOC100041342, LOC619973, LOC667049, Palm2, LOC100041513
Downstream geneAkap2, D630039A03Rik, Txn1, Txndc8, Svep1, Musk, Edg2, LOC675306, LOC433711
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-331K18.bB6Ng01-331K18.g
ACCGA117976GA117977
length1,1731,120
definitionB6Ng01-331K18.b B6Ng01-331K18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcccattaatatcacaaggaaaatggttcaaaaaatcaattgtcta
atgtatactctgcctgaccaactcccaagaaaagacatgacacacattca
gccaatatctaaacaaaggcacaaagctatataccagaatttcctcattt
tctttttcatatttaaaccgacttctctgcctatgggagaagagttagac
ttgtcacatttagtgatagagtattatttagccactatcaatcatgtttt
aacctctggaatttagaggaatatttaaggggaaatgagaaaaagcagtt
ccccaaagttgatttaaaagtgtttaagttggcctgaccagtggcacaga
gccctgagcagaccttgggcccgaactctgcagcaagtcccacaacactc
ataggaagctccactcccagatgctctaactccaagagcccaagagccca
ggagcccaggagcccaggagcccaggagcccaggagcccaggagcccagg
ggcttggtcacaccaggatctctaggtcccagaggtagctttactcccag
gagctctggtacacccaggatctcaggatcccagaggatcacagagacag
ctggactctgaggagttctgacacaaccaggatcacaggaaggacaggcc
ccagtcagatatagtgagggcaggtagcactatcgagaacaagatggcag
gaggtaagtgtaagaatataagcaacagaaaccaaggttacttggcatca
tcagaccccaattctcttaacatagcaagtcctggatataccatcacacc
agaaaaacaagatttggatctaaaatcactttctcatgatgataatacag
gactttaagaaggacataaataactccctttaaaaatacaggagaacaca
ggcaaacagctaggagcccttaaagaggaaacacacaaatccctttaaag
aattacagaaacacaatcaaccaagccaagaatgaacaaaccatccagat
ctaaaattgtaacggaaaccataagaaatcataaatgggagacagtctga
gtagaaaacttagaagagatcatgaatcatgatgcaagcatcacccacga
attcatgagaataaagaagattctcaggtcagatcctagatctgaaccaa
atcaagcatgtcaattagaacca
gaattctcccaggaagcaccatgccctagaaatctgttttgggatttttt
ttcttcttgcttttgacgtagcagaaagtataaactttttttaaaaatca
ataataatgagggccctatcccaacattcctggtttaattggtgtgtggg
gcagcctgaattattgactatatattatattatgtattgtgatattaatt
tattaagcttattaaggtaagtctgcctggtatgcctggtatctggtact
ggaaacagcacctagaaatgtgtgggctaggcagaaatattccaggttca
gtcctttctgctctcccagtaaagggaaggtgtgggcttaggctttggga
atgaagtccaaagcagagcattagccggtcgggcgccctcgggtgattga
tttcagctcagcaagcctgtttctcatctgtaatatggaaacagtacctg
cattgcctgacttctgtgaagagtattttatgtaaagtgtggtggcgcat
tcatgggacaaccttccagacgggaggagggactgcagcctgagcttgga
ctatcttcagtagtctgctgggggtggacccaaggactctgaagggactg
aggaagtggctggaggccaggctatggatgatcagatcattcctctggga
atgagtgacaacctgcaagttcaagggcagacctgggacatactgagtag
acctacagagggtcttggttcggtttggttttcctttgcaaccatccatt
cccatatttttatcttctcttgaaaaattaaatctaaccaggtgagaccc
acatgtccagggggcaggcatttgttgaatgctgggctggactacaggag
atgtctctcaaaacaacaaaacaatgcaacaacaaccacagcataaccat
aacaatatgattataagaggaatttgagtagattacttgtatattgttca
ttgcagtattcttcccaaatagtcaaagatgacaaaaaaaaaaaaacaaa
ccatccctttctcttatttcatcacagataagtcataccagccatgctat
tgatccacacggtgggaatattgtccagaactgggatgccaggacaggct
tagccggagattgtgtccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_57734779_57735891
seq2: B6Ng01-331K18.g_71_1190

seq1  GAATTCTCCCAGGAAGCACCATGCCCTAGAAATCTGTTTTGGGATTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCCAGGAAGCACCATGCCCTAGAAATCTGTTTTGGGATTTTTT  50

seq1  TTCTTCTTGCTTTTGACGTAGCAGAAAGTATAAACTTTTTTTAAAAATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTTGCTTTTGACGTAGCAGAAAGTATAAACTTTTTTTAAAAATCA  100

seq1  ATAATAATGAGGGCCCTATCCCAACATTCCTGGTTTAATTGGTGTGTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAATGAGGGCCCTATCCCAACATTCCTGGTTTAATTGGTGTGTGGG  150

seq1  GCAGCCTGAATTATTGACTATATATTATATTATGTATTGTGATATTAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCTGAATTATTGACTATATATTATATTATGTATTGTGATATTAATT  200

seq1  TATTAAGCTTATTAAGGTAAGTCTGCCTGGTATGCCTGGTATCTGGTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAGCTTATTAAGGTAAGTCTGCCTGGTATGCCTGGTATCTGGTACT  250

seq1  GGAAACAGCACCTAGAAATGTGTGGGCTAGGCAGAAATATTCCAGGTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACAGCACCTAGAAATGTGTGGGCTAGGCAGAAATATTCCAGGTTCA  300

seq1  GTCCTTTCTGCTCTCCCAGTAAAGGGAAGGTGTGGGCTTAGGCTTTGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTTCTGCTCTCCCAGTAAAGGGAAGGTGTGGGCTTAGGCTTTGGGA  350

seq1  ATGAAGTCCAAAGCAGAGCATTAGCCGGTCGGGCGCCCTCGGGTGATTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGTCCAAAGCAGAGCATTAGCCGGTCGGGCGCCCTCGGGTGATTGA  400

seq1  TTTCAGCTCAGCAAGCCTGTTTCTCATCTGTAATATGGAAACAGTACCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGCTCAGCAAGCCTGTTTCTCATCTGTAATATGGAAACAGTACCTG  450

seq1  CATTGCCTGACTTCTGTGAAGAGTATTTTATGTAAAGTGTGGTGGCGCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCCTGACTTCTGTGAAGAGTATTTTATGTAAAGTGTGGTGGCGCAT  500

seq1  TCATGGGACAACCTTCCAGACGGGAGGAGGGACTGCAGCCTGAGCTTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGGACAACCTTCCAGACGGGAGGAGGGACTGCAGCCTGAGCTTGGA  550

seq1  CTATCTTCAGTAGTCTGCTGGGGGTGGACCCAAGGACTCTGAAGGGACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTTCAGTAGTCTGCTGGGGGTGGACCCAAGGACTCTGAAGGGACTG  600

seq1  AGGAAGTGGCTGGAGGCCAGGCTATGGATGATCAGATCATTCCTCTGGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGTGGCTGGAGGCCAGGCTATGGATGATCAGATCATTCCTCTGGGA  650

seq1  ATGAGTGACAACCTGCAAGTTCAAGGGCAGACCTGGGACATACTGAGTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTGACAACCTGCAAGTTCAAGGGCAGACCTGGGACATACTGAGTAG  700

seq1  ACCTACAGAGGGTCTTGGTTCGGTTTGGTTTTCCTTTGCAACCATCCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACAGAGGGTCTTGGTTCGGTTTGGTTTTCCTTTGCAACCATCCATT  750

seq1  CCCATATTTTTATCTTCTCTTGAAAAATTAAATCTAACCAGGTGAGACCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATATTTTTATCTTCTCTTGAAAAATTAAATCTAACCAGGTGAGACCC  800

seq1  ACATGTCCAGGGGGCAGGCATTTGTTGAATGCT-GGCTGGACTACAGGAG  849
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ACATGTCCAGGGGGCAGGCATTTGTTGAATGCTGGGCTGGACTACAGGAG  850

seq1  ATGTCTCTCAAAACAACAAAAACAATGCAACAACAACCACAGCAATAACA  899
      ||||||||||||||||| ||||||||||||||||||||||||| ||||| 
seq2  ATGTCTCTCAAAACAAC-AAAACAATGCAACAACAACCACAGC-ATAACC  898

seq1  ATAACAATATGATTATAAGGAGGAATTTGAGTAGATTACTTGTATATTGT  949
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ATAACAATATGATTATAA-GAGGAATTTGAGTAGATTACTTGTATATTGT  947

seq1  TCATTGCAGTATTCTT-CCAAATAGTCAAAAGATGACAAAAAAAAAAAAA  998
      |||||||||||||||| |||||||||| ||||||||||||||||||||||
seq2  TCATTGCAGTATTCTTCCCAAATAGTC-AAAGATGACAAAAAAAAAAAAA  996

seq1  CAAAACAACCC--TCTCTTA-TTCATCAACAGATA--GCATAACAAAGCA  1043
      |||| || |||  ||||||| |||||| |||||||   ||| || |  ||
seq2  CAAACCATCCCTTTCTCTTATTTCATC-ACAGATAAGTCAT-ACCAGCCA  1044

seq1  TGCTAT--GTCCACACGGT-GGAATATTGTCCAG-ACT-GGATG-CAGGA  1087
      ||||||   |||||||||| |||||||||||||| ||| ||||| |||||
seq2  TGCTATTGATCCACACGGTGGGAATATTGTCCAGAACTGGGATGCCAGGA  1094

seq1  CAGCCTTAGCCTGGAGA-TGGGTCCCT  1113
      ||| ||||||| ||||| || ||||||
seq2  CAGGCTTAGCC-GGAGATTGTGTCCCT  1120