BAC Information

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BAC

Clone NameB6Ng01-332B06
Chromosome4 (Build37)
Map Location 155,449,754 - 155,579,705
singlet/doubletdoublet
Overlap gene9430015G10Rik, EG667357, Agrn, LOC100038882, AW011738
Upstream geneRer1, Morn1, Ski, 2610002J02Rik, Prkcz, Gabrd, 2010015L04Rik, Tmem52, Gnb1, Nadk, A530082C11Rik, Cdc2l1, Mmp23, Mib2, B930041F14Rik, Ssu72, EG381582, Atad3a, Vwa1, A230069A22Rik, E230028L10Rik, Mrpl20, Ccnl2, Aurkaip1, Mxra8, Dvl1, Tas1r3, BC002216, Cpsf3l, Pusl1, Centb5, Ube2j2, C1qdc2, B3galt6, Sdf4, LOC100043436, Tnfrsf4, Tnfrsf18, Ttll10
Downstream geneLOC677185, 2310042D19Rik, Plekhn1, Klhl17, LOC100042378
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-332B06.bB6Ng01-332B06.g
ACCGA118282GA118283
length2871,194
definitionB6Ng01-332B06.b B6Ng01-332B06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(155,449,754 - 155,450,040)(155,578,516 - 155,579,705)
sequence
acagagacagttatgtctctgattcccaagtactgggattaagggcatta
aagacacgtgccacaatgctcagctattcttggattatgaggctggcacg
ggcttgtcagaaaacacatttataatcctcagggttgtgagatggctcca
taaagtatttgccacacaactgtgatgacaagtttcccaatagtcacata
agagctgggtgctgagccatgcatctgtaatcccatgcatgactctctct
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
gaattcatctgcatggctggttcctctccttgtcttttacctccatctcc
tcagcattctgatgaaaatctctcttgttcctgacgaattcccagattct
catctctgccagatgtcccacctcttactttctgcctcaactcattggcc
gtaagcgtttttattggcagatgacgcttccatacagttaacaacagaca
ctctgtatactctgtctagggatgatgtgtccttgccagcctgtcctgca
ggaatccctgcctgtgttgcaggaagggaactggagttgggaaagggaag
ctcaacttggctagaagctgctatctttatgttgaaccatgagaataagc
agaatgcaaatagcgaaaatttaggtttcatggcagacaaggtcagctct
cccctaagtgcagcacaaatcaacacagatcacctttcagggtctggaga
agagtatgaaatttattattatttcttttaaagacagggtttccctgtgc
atccctggctggcctggaactcactgatctgaaactcactatatagacta
ggctgacctcaaactcacagtgattcacctgcttctactttccaagcaca
gattacaggcatgtgccaccatgcccagtagtaccagggctaaggagatg
gctcagggggtaagagcacttgttctacaagcatggaggactgggtttaa
acccatgtaaaaagctagacatgactgtcctgcctggaactccagcacaa
ggaataggggacagacattgacaaattctgagagctcacctttcagctca
atgagagatttctttggttgttttggtttggtttttgagacagggtttcc
tgtgtggcgctagttgtcctggaacttgatctgtagaccaagctgtcccc
aaactcagagatttgcctgcctctccctcctgagagcactgggattaaag
ggcatggatcaccctcaccaccacaaccccgtcccacatgggttaaaacc
ccacctccactcctggcagaggtcttgctgtttgcccatggataattagt
agcacatgcatacatcacaatcacacacaacacacatcaacacgcaccac
acagttattttttttaaatcaggaacccccccccttccatactttcttcc
caaatcaccttactgaccgagaacagctggtgaactgtacacct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_155449754_155450040
seq2: B6Ng01-332B06.b_52_338

seq1  ACAGAGACAGTTATGTCTCTGATTCCCAAGTACTGGGATTAAGGGCATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGACAGTTATGTCTCTGATTCCCAAGTACTGGGATTAAGGGCATTA  50

seq1  AAGACACGTGCCACAATGCTCAGCTATTCTTGGATTATGAGGCTGGCACG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACACGTGCCACAATGCTCAGCTATTCTTGGATTATGAGGCTGGCACG  100

seq1  GGCTTGTCAGAAAACACATTTATAATCCTCAGGGTTGTGAGATGGCTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGTCAGAAAACACATTTATAATCCTCAGGGTTGTGAGATGGCTCCA  150

seq1  TAAAGTATTTGCCACACAACTGTGATGACAAGTTTCCCAATAGTCACATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTATTTGCCACACAACTGTGATGACAAGTTTCCCAATAGTCACATA  200

seq1  AGAGCTGGGTGCTGAGCCATGCATCTGTAATCCCATGCATGACTCTCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTGGGTGCTGAGCCATGCATCTGTAATCCCATGCATGACTCTCTCT  250

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  287
      |||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  287

seq1: chr4_155578516_155579705
seq2: B6Ng01-332B06.g_66_1259 (reverse)

seq1  AGGTG-ACAG-TCACCAAGCTG-TCTCGGTGCAGTAAGGTGATTGGGGA-  46
      ||||| |||| ||||| ||||| ||||||| ||||||||||||| |||| 
seq2  AGGTGTACAGTTCACC-AGCTGTTCTCGGT-CAGTAAGGTGATTTGGGAA  48

seq1  -GAAGTATGGGAAGGGGGGGGTTCCTGATTT-AAAAAAATAACTGTGTGT  94
        |||||||| | |||||||||||||||||| ||||||||||||||||| 
seq2  GAAAGTATGGAAGGGGGGGGGTTCCTGATTTAAAAAAAATAACTGTGTG-  97

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGATTGTGATGTATGCATGTGCTAC  144
      ||| ||||   ||||||| |||||||||||||||||||||||||||||||
seq2  GTGCGTGTTGATGTGTGT-TGTGTGTGATTGTGATGTATGCATGTGCTAC  146

seq1  TATGTATCCATGGGCAAACAGCAAGACTTCTGCCAGGAGTGG-GGTGGGG  193
      ||  ||||||||||||||||||||||| |||||||||||||| |||||||
seq2  TAATTATCCATGGGCAAACAGCAAGACCTCTGCCAGGAGTGGAGGTGGGG  196

seq1  TTGTAACCATGGTGGGACGGGGTTGTGGTGGTGAGGGTGATCCATG-CCT  242
      || |||||   ||||||||||||||||||||||||||||||||||| |||
seq2  TTTTAACCCATGTGGGACGGGGTTGTGGTGGTGAGGGTGATCCATGCCCT  246

seq1  TTAATCCCAGTGCTCTCAGGAGGGAGAGGCAGGCAAATCTCTGAGTTTGG  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCCCAGTGCTCTCAGGAGGGAGAGGCAGGCAAATCTCTGAGTTTGG  296

seq1  GGACAGCTTGGTCTACAGATCAAGTTCCAGGACAACTAGCGCCACACAGG  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGCTTGGTCTACAGATCAAGTTCCAGGACAACTAGCGCCACACAGG  346

seq1  AAACCCTGTCTCAAAAACCAAACCAAAACAACCAAAGAAATCTCTCATTG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCTGTCTCAAAAACCAAACCAAAACAACCAAAGAAATCTCTCATTG  396

seq1  AGCTGAAAGGTGAGCTCTCAGAATTTGTCAATGTCTGTCCCCTATTCCTT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAAAGGTGAGCTCTCAGAATTTGTCAATGTCTGTCCCCTATTCCTT  446

seq1  GTGCTGGAGTTCCAGGCAGGACAGTCATGTCTAGCTTTTTACATGGGTTT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGGAGTTCCAGGCAGGACAGTCATGTCTAGCTTTTTACATGGGTTT  496

seq1  AAACCCAGTCCTCCATGCTTGTAGAACAAGTGCTCTTACCCCCTGAGCCA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCAGTCCTCCATGCTTGTAGAACAAGTGCTCTTACCCCCTGAGCCA  546

seq1  TCTCCTTAGCCCTGGTACTACTGGGCATGGTGGCACATGCCTGTAATCTG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTAGCCCTGGTACTACTGGGCATGGTGGCACATGCCTGTAATCTG  596

seq1  TGCTTGGAAAGTAGAAGCAGGTGAATCACTGTGAGTTTGAGGTCAGCCTA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGGAAAGTAGAAGCAGGTGAATCACTGTGAGTTTGAGGTCAGCCTA  646

seq1  GTCTATATAGTGAGTTTCAGATCAGTGAGTTCCAGGCCAGCCAGGGATGC  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATATAGTGAGTTTCAGATCAGTGAGTTCCAGGCCAGCCAGGGATGC  696

seq1  ACAGGGAAACCCTGTCTTTAAAAGAAATAATAATAAATTTCATACTCTTC  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGAAACCCTGTCTTTAAAAGAAATAATAATAAATTTCATACTCTTC  746

seq1  TCCAGACCCTGAAAGGTGATCTGTGTTGATTTGTGCTGCACTTAGGGGAG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGACCCTGAAAGGTGATCTGTGTTGATTTGTGCTGCACTTAGGGGAG  796

seq1  AGCTGACCTTGTCTGCCATGAAACCTAAATTTTCGCTATTTGCATTCTGC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGACCTTGTCTGCCATGAAACCTAAATTTTCGCTATTTGCATTCTGC  846

seq1  TTATTCTCATGGTTCAACATAAAGATAGCAGCTTCTAGCCAAGTTGAGCT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCTCATGGTTCAACATAAAGATAGCAGCTTCTAGCCAAGTTGAGCT  896

seq1  TCCCTTTCCCAACTCCAGTTCCCTTCCTGCAACACAGGCAGGGATTCCTG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTTCCCAACTCCAGTTCCCTTCCTGCAACACAGGCAGGGATTCCTG  946

seq1  CAGGACAGGCTGGCAAGGACACATCATCCCTAGACAGAGTATACAGAGTG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACAGGCTGGCAAGGACACATCATCCCTAGACAGAGTATACAGAGTG  996

seq1  TCTGTTGTTAACTGTATGGAAGCGTCATCTGCCAATAAAAACGCTTACGG  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTGTTAACTGTATGGAAGCGTCATCTGCCAATAAAAACGCTTACGG  1046

seq1  CCAATGAGTTGAGGCAGAAAGTAAGAGGTGGGACATCTGGCAGAGATGAG  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGAGTTGAGGCAGAAAGTAAGAGGTGGGACATCTGGCAGAGATGAG  1096

seq1  AATCTGGGAATTCGTCAGGAACAAGAGAGATTTTCATCAGAATGCTGAGG  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGGGAATTCGTCAGGAACAAGAGAGATTTTCATCAGAATGCTGAGG  1146

seq1  AGATGGAGGTAAAAGACAAGGAGAGGAACCAGCCATGCAGATGAATTC  1190
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGAGGTAAAAGACAAGGAGAGGAACCAGCCATGCAGATGAATTC  1194