BAC Information

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BAC

Clone NameB6Ng01-332G09
Chromosome4 (Build37)
Map Location 89,543,293 - 89,544,392
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040617, Mtap, LOC625574, Cdkn2a, Cdkn2b, LOC664785, Dmrta1
Downstream geneZfp352, LOC619842, LOC435792, Ppia-ps4_804.1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-332G09.bB6Ng01-332G09.g
ACCGA118513GA118514
length1,0551,089
definitionB6Ng01-332G09.b B6Ng01-332G09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaactatcccaatattcttgccagcacttgttgtcatttggtttt
tgggatgttgttgttgttgttgtttgtttgtttgtttcttgatgatagcc
attttggctagagtgagatgaaatctaaaacttttttattgtatattttt
taatgtctatgtatagtgatcactttcaagaatatttattagtcatttga
gtactatgtgctcagttcagtgttctattttttttaattccacatgccct
ttattactattcatattcatcagcctctatttgcatatttcttccttctt
ataatttttattttatttactttacatcccaatcacagcactcctccctt
ctctcttcgtagtcccacccttacaaataccttcctccattgtcccactc
cttcttttcagagaaagggaacccccacctccttggctaccatcctgccc
gggggtatctagtcccagcaggtctaggcacaacctctcccactgagacc
catccaggcagtccgagtagggggaagagggtacaatggcagggaacaaa
gaccaagacagacgctgctacctcttaataggggatccacatgaacacca
agctgcacatttgctacaaatgtgtagggatctaggtccagcccctacat
gctctttggttggtgtttcagtctcccacccccatgatgccagtttagtt
gactctgggggtcttctgatgtccttgactcctccaactttctcacttct
accacccctttttaatttttgcaggaaagtggatgaaacttgagagcatc
atcctgactgtggtaacccagagtcagaaagacatgtatggtacatactg
atttatcagtggatcttagccataaagttcagataactacatccacagac
ccaaagaaactgggtcattaggaggtaccaaagggaggatgcacagatct
cactagagcagaaagtaattgctcatcagagatgatagatcaaggaactg
ggtaggagaggagatgaggaggaaactgggtggcaatcagtggtggggag
aaatt
gaattccaggtgcctctgatgctagcatgctatgctgatctaagaatgga
acatcttatggaggtgggaggaggcttagttctttctttttagacagttg
ggactagttcatagaaacttaagtattatcagaagagtattccactaaat
taatctccttagtccattttagaattagattactgctatactacaaataa
actcagagagcaagtcttttatagactcttctgtctctgaagttgtgaga
agaaagattcaatctggcacaattcaaagccatgactgactgtatgaggt
tccatggaactatttctaagatagcttcatatccaggaaatattgttaca
caacaaaatggtggcaaaaacatggagggaggtgtaatgtgaggatgcag
gcatgagaagaggccaggacaaagaagtgttctttggtcagactagatca
ccactatgtactagttgggtgactctgagtgtagccaagacctctattga
gtcaccagtgtctagatccctttccaaaagggagggaagaaaagcaaaac
tttagatgttagcagaaacagataacagacccaaaaggcaggatgtgccc
tctctgtgatggtcaattttcatccagaatttctcatcccttattctttc
tggtaattaagtttccagagtttcagttgcctgtggggctgtctgctgaa
tgttatatttcatgaccttgaatttgggtgtggattgaataacagttaac
tctgccatgtgtctcgccttacagcagaggtgacttcatagagtggagta
cacagaaattgggtttttcatttcacttttgttcctttcttctttgggat
cagtcattctttgacaccctttctttctccacccttctctgtccttatgg
gaaactatttataaaggaaaatatgagcagaaataatggccaaaccacta
atacttttcctcctagataaatgggctgtctgagtatcgccaatatgtat
cctttttttttaaatttttttccattttataggtattaagctcattacat
ttcatgctatacaaagtcccataaccccactgccctacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_89543293_89544392
seq2: B6Ng01-332G09.g_68_1156

seq1  GAATTCCAGGTGCCTCTGATGCTAGCATGCTATGCTGATCTAAGAATGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGTGCCTCTGATGCTAGCATGCTATGCTGATCTAAGAATGGA  50

seq1  ACATCTTATGGAGGTGGGAGGAGGCTTAGTTCTTTCTTTTTAGACAGTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTTATGGAGGTGGGAGGAGGCTTAGTTCTTTCTTTTTAGACAGTTG  100

seq1  GGACTAGTTCATAGAAACTTAAGTATTATCAGAAGAGTATTCCACTAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTAGTTCATAGAAACTTAAGTATTATCAGAAGAGTATTCCACTAAAT  150

seq1  TAATCTCCTTAGTCCATTTTAGAATTAGATTACTGCTATACTACAAATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTCCTTAGTCCATTTTAGAATTAGATTACTGCTATACTACAAATAA  200

seq1  ACTCAGAGAGCAAGTCTTTTATAGACTCTTCTGTCTCTGAAGTTGTGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGAGAGCAAGTCTTTTATAGACTCTTCTGTCTCTGAAGTTGTGAGA  250

seq1  AGAAAGATTCAATCTGGCACAATTCAAAGCCATGACTGACTGTATGAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGATTCAATCTGGCACAATTCAAAGCCATGACTGACTGTATGAGGT  300

seq1  TCCATGGAACTATTTCTAAGATAGCTTCATATCCAGGAAATATTGTTACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGGAACTATTTCTAAGATAGCTTCATATCCAGGAAATATTGTTACA  350

seq1  CAACAAAATGGTGGCAAAAACATGGAGGGAGGTGTAATGTGAGGATGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAAATGGTGGCAAAAACATGGAGGGAGGTGTAATGTGAGGATGCAG  400

seq1  GCATGAGAAGAGGCCAGGACAAAGAAGTGTTCTTTGGTCAGACTAGATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAGAAGAGGCCAGGACAAAGAAGTGTTCTTTGGTCAGACTAGATCA  450

seq1  CCACTATGTACTAGTTGGGTGACTCTGAGTGTAGCCAAGACCTCTATTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTATGTACTAGTTGGGTGACTCTGAGTGTAGCCAAGACCTCTATTGA  500

seq1  GTCACCAGTGTCTAGATCCCTTTCCAAAAGGGAGGGAAGAAAAGCAAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCAGTGTCTAGATCCCTTTCCAAAAGGGAGGGAAGAAAAGCAAAAC  550

seq1  TTTAGATGTTAGCAGAAACAGATAACAGACCCAAAAGGCAGGATGTGCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGATGTTAGCAGAAACAGATAACAGACCCAAAAGGCAGGATGTGCCC  600

seq1  TCTCTGTGATGGTCAATTTTCATCCAGAATTTCTCATCCCTTATTCTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTGATGGTCAATTTTCATCCAGAATTTCTCATCCCTTATTCTTTC  650

seq1  TGGTAATTAAGTTTCCAGAGTTTCAGTTGCCTGTGGGGCTGTCTGCTGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAATTAAGTTTCCAGAGTTTCAGTTGCCTGTGGGGCTGTCTGCTGAA  700

seq1  TGTTATATTTCATGACCTTGAATTTGGGTGTGGATTGAATAACAGTTAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATATTTCATGACCTTGAATTTGGGTGTGGATTGAATAACAGTTAAC  750

seq1  TCTGCCATGTGTCTCGCCTTACAGCAGAGGTGACTTCATAGAGTGGAGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCATGTGTCTCGCCTTACAGCAGAGGTGACTTCATAGAGTGGAGTA  800

seq1  CACAGAAATTGGGTTTTTCATTTCACTTTTGTTCCTTTCTTCTTT-GGAT  849
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CACAGAAATTGGGTTTTTCATTTCACTTTTGTTCCTTTCTTCTTTGGGAT  850

seq1  CAGTCATTCTTTGACACCCTTTCTTTCTCCACCCTTCTCTGTCCTTATGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCATTCTTTGACACCCTTTCTTTCTCCACCCTTCTCTGTCCTTATGG  900

seq1  GAAACTATTTAT-AAGGAAAATATGAGCAGAAATAATGGCCAAACCACTA  948
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GAAACTATTTATAAAGGAAAATATGAGCAGAAATAATGGCCAAACCACTA  950

seq1  ATACTTTTCCTCCTAGAT-AATGGGCTGTCTGAGGTTATCGCCCATATGT  997
      |||||||||||||||||| |||||||||||||||  ||||||| ||||||
seq2  ATACTTTTCCTCCTAGATAAATGGGCTGTCTGAG--TATCGCCAATATGT  998

seq1  ATTCCTTTTTTTTTTTAAATTTTTTTTCCATTTTTATTAGGTATTTAGCT  1047
      | ||||||||||||   || ||||||||||||||   |||||||| ||||
seq2  A-TCCTTTTTTTTT---AAATTTTTTTCCATTTT--ATAGGTATTAAGCT  1042

seq1  CATTTACATTTCCAATGCTATACCAAAAGTCCCCCATACCCCACTCCCCT  1097
      || |||||||||  |||||||||  ||||||||  | |||||||| ||||
seq2  CA-TTACATTTC--ATGCTATAC--AAAGTCCCATA-ACCCCACTGCCCT  1086

seq1  ACC  1100
      |||
seq2  ACC  1089