BAC Information

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BAC

Clone NameB6Ng01-334E03
Chromosome4 (Build37)
Map Location 61,360,834 - 61,361,825
singlet/doubletsinglet
Overlap geneLOC384021
Upstream geneLOC100038948, LOC620997, Mup1, LOC620942, LOC100039008, LOC100039028, LOC620982, LOC100039054, LOC100039063, LOC667234, LOC100039089, LOC667239, LOC100039116, LOC667242, LOC100039150, LOC100039019, LOC100039177, LOC621093, LOC100039206, LOC621127, LOC100039228
Downstream geneLOC100039247, LOC667278, Mup5, LOC435785, LOC667295, LOC100039305, LOC546832, OTTMUSG00000007485, Mup3, LOC100039345, OTTMUSG00000000231, Zfp37, Slc31a2, Fkbp15, Slc31a1, Cdc26, Prpf4, Rnf183, Wdr31, Bspry, Hdhd3, Alad, Pole3, 4933430I17Rik, Rgs3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-334E03.bB6Ng01-334E03.g
ACCGA119806GA119807
length996969
definitionB6Ng01-334E03.b B6Ng01-334E03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcctgtgtggtactgggaaccacatcaggctccattacagagtg
ctaatttgaggcagatggtggaaatctggctggtaatctagaccactggc
tgaagtccagcatcggtgaaacttagaagtagttgcagtttttctaagga
tgagaagtgattgccgttttctagtttaaaaataataggcaatttgtgat
tgctaaagcatcagatataaaggaaataatgtaaataaaatcctttagct
attttttccaaaagtcagaagttaaatggaatcagaaactggagatatgt
atagtgtagtggggcaagaagccagccagttcaaaataccttactcacca
gttcactctgttttacagtatagattaagagtgctccaaagtatttttag
ttggtgacaaaacagaaaaggctggtaatattctgtgacatgtgtgtata
taaaatgtctatccacaacatgattcgtaaaccttaatacctttagtgtg
tgtgtgtgtgtgtgttgctttagtctgaactcaggaacttaaatctacta
gtcaaatgagcaccatctattagctaacaccctgtggcctgcaagtggga
taagtagggggatatagaatctatttgatgctgcctggtggctagcactg
tttcgcatcgctcagggtttagcagcagataatttgataaaacaaactta
tgaaagatagaaacatgtttgcttgaagctgctgagggaggtaggtaagc
ctaggagaggatgagagagtggtgctcctgtggcttactgttcactagtg
gtctggacctctcagagtccctttttcttagatattactttcttgaagtt
cagaaagctaaacacagaaaggcaaagacactttaccaatctcttccagg
atatgtatttttaatgattttgtgtttggggtagaacaagaagagtgtat
ccatcatttcctgcgaacaaagaatttctgagccatgtcccttttc
gaattctttgtttagctctgtaccctatctttaatagggttatttggttc
tctggcatataactttttgagttctgtctatatattgaagccctctatca
tatgtggagttggtaaagatcttttcccaatctattggttgctgttttgt
cctattgacagtgtcagttgccttacaaaagctttgcaagtatatgcggt
cccatttgtcaatttttgatcttaaagcataagctatgggtgttctgttc
aggaaattttcccgtgtacccatgtgcttgtggctcttcccttcttcttt
tctatcagtttcagtgtatctagttttatgtagaggtccttgacccactt
ggacttgagttttgtagaagtagataagaatgcattgatttgctttcttc
tacatgctaactgccagttgagccagcaccatttgttgaaaatgctgtct
tttccactggatggtttagctcctttttctaaaatcatgtgaccatatgt
gtgtgggttcatttctgggtcttcaattctattcctttgatctatcttcc
tgtcactgtaccaataccttgaagtgtttttttttttttttttttttttt
tttttttggtattacagatgaattttgcaacttggtcttttctaaatgat
gaagaattgagttgggaattttgatgggggattatattgagtttgtggat
tgcttttggcaagatgtccatttttactatattaatcctgccaattcatg
atcatgagagaacttctttccatcttctgagatctttgatttctttctta
gagacttgaagttcctctcatacagatcttttcacttcttagtagagtca
cagcaagttattttattttgtgactattgtgatggtgtgattcctactac
ttctcagcctgttatccttgaatagagaaaggcactgattgttgaattat
tatatccagcactttgctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_61360834_61361825
seq2: B6Ng01-334E03.b_52_1047

seq1  GAATTCTCCTGTGTGGTACTGGGAACCACATCAGGCTCCATTACAGAGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTGTGTGGTACTGGGAACCACATCAGGCTCCATTACAGAGTG  50

seq1  CTAATTTGAGGCAGATGGTGGAAATCTGGCTGGTAATCTAGACCACTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTGAGGCAGATGGTGGAAATCTGGCTGGTAATCTAGACCACTGGC  100

seq1  TGAAGTCCAGCATCGGTGAAACTTAGAAGTAGTTGCAGTTTTTCTAAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTCCAGCATCGGTGAAACTTAGAAGTAGTTGCAGTTTTTCTAAGGA  150

seq1  TGAGAAGTGATTGCCGTTTTCTAGTTTAAAAATAATAGGCAATTTGTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGTGATTGCCGTTTTCTAGTTTAAAAATAATAGGCAATTTGTGAT  200

seq1  TGCTAAAGCATCAGATATAAAGGAAATAATTTAAATAAAATCCTTTAGCT  250
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TGCTAAAGCATCAGATATAAAGGAAATAATGTAAATAAAATCCTTTAGCT  250

seq1  ATTTTTTCCAAAAGTCAGAAGTTAAATGGAATCAGAAACTGGAGATATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTCCAAAAGTCAGAAGTTAAATGGAATCAGAAACTGGAGATATGT  300

seq1  ATAGTGTAGTGGGGCAAGAAGCCAGCCAGTTCAAAATACCTTACTCACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGTAGTGGGGCAAGAAGCCAGCCAGTTCAAAATACCTTACTCACCA  350

seq1  GTTCACTCTGTTTTACAGTATAGATTAAGAGTGCTCCAAAGTATTTTTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACTCTGTTTTACAGTATAGATTAAGAGTGCTCCAAAGTATTTTTAG  400

seq1  TTGGTGACAAAACAGAAAAGGCTGGTAATATTCTGTGACATGTGTGTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGACAAAACAGAAAAGGCTGGTAATATTCTGTGACATGTGTGTATA  450

seq1  TAAAATGTCTATCCACAACATGATTCGT-AACCTTAATACCTTTAGTGTG  499
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TAAAATGTCTATCCACAACATGATTCGTAAACCTTAATACCTTTAGTGTG  500

seq1  TGTGTGTGTGTGTGTTGCTTTAGTCTGAACTCAGGAACTTAAATCTACTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTTGCTTTAGTCTGAACTCAGGAACTTAAATCTACTA  550

seq1  GTCAAATGAGCACCATCTAATAGCTAACACCCTGTGGCCTGCAAGTGGGA  599
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GTCAAATGAGCACCATCTATTAGCTAACACCCTGTGGCCTGCAAGTGGGA  600

seq1  TAAGTAGGGGGATATAGAATCTATTTGATGCTGCCTGGTGGCTAGCACTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTAGGGGGATATAGAATCTATTTGATGCTGCCTGGTGGCTAGCACTG  650

seq1  TTTCGCATCGCTCAGGGTTTAGCAGCAGATAATTTGATAAAACAAACTTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGCATCGCTCAGGGTTTAGCAGCAGATAATTTGATAAAACAAACTTA  700

seq1  TGAAAGATAGAAACATG-TTGCTTGAAGCTGCTGAGGGAGGTAGGTAAGC  748
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TGAAAGATAGAAACATGTTTGCTTGAAGCTGCTGAGGGAGGTAGGTAAGC  750

seq1  CTAGGAGAGGATGAGAGAGTGGTGCTCCTGTGGCTTACTGTTCACTAGTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAGAGGATGAGAGAGTGGTGCTCCTGTGGCTTACTGTTCACTAGTG  800

seq1  GTCTGGACCTCTCAGAGTCCC-TTTTCTTAGATATTAC-TTCTTGAAGTT  846
      ||||||||||||||||||||| |||||||||||||||| |||||||||||
seq2  GTCTGGACCTCTCAGAGTCCCTTTTTCTTAGATATTACTTTCTTGAAGTT  850

seq1  CAGAAAGCTAAACACAGAAAGGCAAAGACACTTTACCAATCTCTTCCAGG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGCTAAACACAGAAAGGCAAAGACACTTTACCAATCTCTTCCAGG  900

seq1  ATATGTA-TTTTAATGATTTTGTGTTTGGGGTAGAACAAGAAGAGTGTAT  945
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTATTTTTAATGATTTTGTGTTTGGGGTAGAACAAGAAGAGTGTAT  950

seq1  CCATCATTTCCTGCAGAACAAAGAATTTCTGAGCCATGTCCCATTTC  992
      |||||||||||||| ||||||||||||||||||||||||||| ||||
seq2  CCATCATTTCCTGC-GAACAAAGAATTTCTGAGCCATGTCCCTTTTC  996