BAC Information

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BAC

Clone NameB6Ng01-334F05
Chromosome4 (Build37)
Map Location 91,584,571 - 91,585,755
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC664840, LOC664848, LOC100042274, Elavl2, LOC664864, LOC620016, LOC654475
Downstream gene4930577H14Rik, LOC664886, 1700011H22Rik, LOC68280
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-334F05.bB6Ng01-334F05.g
ACCGA119855GA119856
length1,1841,138
definitionB6Ng01-334F05.b B6Ng01-334F05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaccttcctacccttgctcttctttcatggtcagatcagtattt
tgaaacaagtgagaaggaagtttggtttattttatttacttttaaatcag
gctaccctgcctactacctatgaatagagcaaacaacacctgcggtcacc
gcacaggtgcttgctctcgcagacaccttctacagctgcagaaacctcaa
tgatgaggtggcttttaaggaggttataatagtttttgtgttattgccca
ctatttggatctttattctgatgtgtcaaaaaaaaaaacccttttgtatg
aaatttacttttctgtgatctagtaaactgataaaatttaaagattttct
aattttattataaatgctagcaccacaaagatattgagaaaacaggcttt
tgatttgacagggcttccactaataaatatggagcaatttgaacatcaag
ctaagtgaacagaaacaaattatataacaagaaataaaataaaagatcat
gactttataattgctttataagagtaatccttaaaacatatcctaatatg
ttagtatattagtatcttcaccttatatgtgatataagtgagggttctga
aagttgaagtcagctgctcaagtccatacatatcaagaaaagttggtttt
cttccttttgttatccaatttgaaagttatagaaaaatcacaaacagagt
atagaaaaattttcttcctgaatcacataagaataagttgttgattctac
atgtcacacttaaatgtttaggaagcaaggacattagatcgatcatacaa
ctacagagcaaacatgacattcagtagtcataataaacaatggacagaaa
cattctgcacatagcaaatactcaatcaacatttccaaatttaatcttaa
taaaaaaaaataagtgagatataactatatcctgctccaagtttagaata
gtggttctactaatagaaatggtttaaaataattttataaagtcttgttc
atcaacacaaatcagctcttgaataaaacttctttacaaactgttcatgt
aatatctcaattgtaaagttcaaataaagtcttatttcacagctatgctt
agaagaaggtaagcagtatgataataacagcaaacatttgctttcatttc
tttatggagcacatttataccttattgaactgca
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaatgagacgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgtagggt
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaactgg
aattcgatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatgttcaacttgatcctgattcaactt
tggtacctgatatctgtccagaaatttgcccatttcctccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccttgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactactcctttggttaaatctttga
atagttcttctttgtttccacttggttgatttcacccctgagtttgatta
tttcctgccatctactcctcttgggtgaatttgctttctttttttctaga
gcttttagatgtgttgtcaagctgctagtatgtgcctctctcccattttt
tcttggaggcacctcagagctatgagttttcctcttagaaatgctttcca
ttgtgtcccataggtttgggtacgttgtgcttcattttcataaactctct
aagaagttcctttattgatcttttattccctcccttgaccagtatccatg
tgaaagaagtggttgtccatttcacgtgtgaaatgttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_91584571_91585755
seq2: B6Ng01-334F05.b_46_1229 (reverse)

seq1  TGCAGTACAATA--GTATATATGTGCT-CATAAAGCAATGGACAGCATAT  47
      |||||| |||||  ||||| ||||||| ||||||| ||| || |||| ||
seq2  TGCAGTTCAATAAGGTATAAATGTGCTCCATAAAGAAAT-GAAAGCAAAT  49

seq1  GTTTGCTGTTATTATCATACTGCTTA-CTTCTTCTAAGCATTAGCTGTGA  96
      |||||||||||||||||||||||||| ||||||||||||| |||||||||
seq2  GTTTGCTGTTATTATCATACTGCTTACCTTCTTCTAAGCA-TAGCTGTGA  98

seq1  AATAAGACTTTATTTTGAACTTTTACAATTGAGATATTTACATGAACAGT  146
      |||||||||||| ||||||| ||||||||||||||| |||||||||||||
seq2  AATAAGACTTTA-TTTGAAC-TTTACAATTGAGATA-TTACATGAACAGT  145

seq1  TTGTAAAG-AGTTTTATTCAGGAGCTGATTTGTGTTGATGAACAAGACTT  195
      |||||||| ||||||||||| |||||||||||||||||||||||||||||
seq2  TTGTAAAGAAGTTTTATTCAAGAGCTGATTTGTGTTGATGAACAAGACTT  195

seq1  TATAAAATTATTTTTAAACCATTTCTATTAGTAGAACCACTATTCTAAAC  245
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TATAAAATTA-TTTTAAACCATTTCTATTAGTAGAACCACTATTCTAAAC  244

seq1  TTGGAGCAGGATATAGTTATATCTCACTTATTTTTTTTTATTAAGATTAA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGCAGGATATAGTTATATCTCACTTATTTTTTTTTATTAAGATTAA  294

seq1  ATTTGGAAATGTTGATTGAGTATTTGCTATGTGCAGAATGTTTCTGTCCA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGAAATGTTGATTGAGTATTTGCTATGTGCAGAATGTTTCTGTCCA  344

seq1  TTGTTTATTATGACTACTGAATGTCATGTTTGCTCTGTAGTTGTATGATC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTATTATGACTACTGAATGTCATGTTTGCTCTGTAGTTGTATGATC  394

seq1  GATCTAATGTCCTTGCTTCCTAAACATTTAAGTGTGACATGTAGAATCAA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTAATGTCCTTGCTTCCTAAACATTTAAGTGTGACATGTAGAATCAA  444

seq1  CAACTTATTCTTATGTGATTCAGGAAGAAAATTTTTCTATACTCTGTTTG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTATTCTTATGTGATTCAGGAAGAAAATTTTTCTATACTCTGTTTG  494

seq1  TGATTTTTCTATAACTTTCAAATTGGATAACAAAAGGAAGAAAACCAACT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTTCTATAACTTTCAAATTGGATAACAAAAGGAAGAAAACCAACT  544

seq1  TTTCTTGATATGTATGGACTTGAGCAGCTGACTTCAACTTTCAGAACCCT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGATATGTATGGACTTGAGCAGCTGACTTCAACTTTCAGAACCCT  594

seq1  CACTTATATCACATATAAGGTGAAGATACTAATATACTAACATATTAGGA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTATATCACATATAAGGTGAAGATACTAATATACTAACATATTAGGA  644

seq1  TATGTTTTAAGGATTACTCTTATAAAGCAATTATAAAGTCATGATCTTTT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTTTAAGGATTACTCTTATAAAGCAATTATAAAGTCATGATCTTTT  694

seq1  ATTTTATTTCTTGTTATATAATTTGTTTCTGTTCACTTAGCTTGATGTTC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTTCTTGTTATATAATTTGTTTCTGTTCACTTAGCTTGATGTTC  744

seq1  AAATTGCTCCATATTTATTAGTGGAAGCCCTGTCAAATCAAAAGCCTGTT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGCTCCATATTTATTAGTGGAAGCCCTGTCAAATCAAAAGCCTGTT  794

seq1  TTCTCAATATCTTTGTGGTGCTAGCATTTATAATAAAATTAGAAAATCTT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAATATCTTTGTGGTGCTAGCATTTATAATAAAATTAGAAAATCTT  844

seq1  TAAATTTTATCAGTTTACTAGATCACAGAAAAGTAAATTTCATACAAAAG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTTATCAGTTTACTAGATCACAGAAAAGTAAATTTCATACAAAAG  894

seq1  GGTTTTTTTTTTTGACACATCAGAATAAAGATCCAAATAGTGGGCAATAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTTTTTTTGACACATCAGAATAAAGATCCAAATAGTGGGCAATAA  944

seq1  CACAAAAACTATTATAACCTCCTTAAAAGCCACCTCATCATTGAGGTTTC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAAACTATTATAACCTCCTTAAAAGCCACCTCATCATTGAGGTTTC  994

seq1  TGCAGCTGTAGAAGGTGTCTGCGAGAGCAAGCACCTGTGCGGTGACCGCA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCTGTAGAAGGTGTCTGCGAGAGCAAGCACCTGTGCGGTGACCGCA  1044

seq1  GGTGTTGTTTGCTCTATTCATAGGTAGTAGGCAGGGTAGCCTGATTTAAA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTGTTTGCTCTATTCATAGGTAGTAGGCAGGGTAGCCTGATTTAAA  1094

seq1  AGTAAATAAAATAAACCAAACTTCCTTCTCACTTGTTTCAAAATACTGAT  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAATAAAATAAACCAAACTTCCTTCTCACTTGTTTCAAAATACTGAT  1144

seq1  CTGACCATGAAAGAAGAGCAAGGGTAGGAAGGTAGAATTC  1185
      ||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCATGAAAGAAGAGCAAGGGTAGGAAGGTAGAATTC  1184