BAC Information

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BAC

Clone NameB6Ng01-335F17
Chromosome4 (Build37)
Map Location 37,940,627 - 37,941,562
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC545600, LOC621458, LOC277771
Downstream geneLOC100039448, LOC665520, LOC100039487
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-335F17.bB6Ng01-335F17.g
ACCGA120612GA120613
length9351,214
definitionB6Ng01-335F17.b B6Ng01-335F17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattgcatgtgataaatatttagtttttttaaaaaagcacagtat
attcaggtaatttatatgaatatatatgcatgtaatagttatatatatat
atacatatacatatatatacatttattattttatatgtatatagaaaaga
tctattatatgtctgcctatgaaatctcaaaacagtatctctaatatttt
tgtacaatgataatatttgccattatgtttttatttgataattcatgttt
cctctctgaaggtgaagatgatttttaataattcattcatgtattttcaa
aacaagtataggaatatttcagactcccttccaaaagccgtatatcagga
aatcataagttagataatttgtccttcataacagttaaattagtttattg
gttcttactctagttttttcattttacttgtccttatttacttttaatga
tttttatttgtctttaatgtaatatctatctatctatttaccaagtatta
atttgttcatattctctgagtaaaatattacattttagtaatgctccctt
tataatttttaaatgaaattagaataaatacaatgcaacctcaaaacaca
tcactattcagaatctttacttccactttttgcaaatatataagaaagca
ctgttattcatagccattctagtttacagaaggtttcttattcctctaaa
actaaaatgttgtatttattgattaacattatcaccttcacaaacccatg
ggagctccaattttgaaataattaaaaatgaacaagattagaaaatggaa
atagaatagatagtttctggcggattaaaacggtctagaatggagggtca
agtggaaatgataagtaaaaattggaggagtgggagggaatatggggaaa
gacatggtaaattatggggacttaatatatagtat

gaattctcacctgaggaataccgaatggcaaagtggattttcttcaccct
gcagaaaaacgtaaatagctccctgtgatctgattaatataggatccggg
ccataccatttattatcaaggatgtttttccatttgaccttttcactggg
cgattgaggccattgtccatgcctttcgactggtgatcttccagcatcat
ccaattaaaaaaaaattaagagtaaatattgtaagggatagagccatctt
tggtgtcataacctctatcccccctttttgtttttgcaaatattgtttca
aagtacgatgggctctctcaatgatgccttggccctgtggattatagggc
aacccagtaatatgtttcacttgcatttgtttgcaaaattggctaaattt
agaagaagtatatgcaggaccattatctgtctttagcactaagggcttgc
cccatgcagcccaagcctccaagcagtgagatatgacatgaactgctttt
tcccctgtcaatggagaggcatgtagggcaccagaactggtatcgatgga
cacatgtacatattgtaatttcccaaaagctgggatatgcttgatgtcca
tttgccaaacatctaggggtcgcaatccacgaggattaacgcccatggaa
agtacattaataaattctacacatctaccacactgtaggacaatatctgg
agcttctgttcgtgtgagcttaaacttttgttgtaatgtagaagcaggga
catgataaagttgatgaaaattcttagcactgtctatagagctttgtgat
aggaaaaccatatctctggtggctgaatcagcaattacatttcccttaac
cataggtccaggtaatgatgtatgtgctctaatatgttgaatataaaagg
gatgctcacacatcaaaatacaatcttgtattttcatcaaaatttcagat
actggactggactgctaaaatttccagcagtctctaatgctagtacagca
ttgaccatataagcagatcagagatatatttatggcataaaatcttttaa
gacttctaaaatcaccaaacatctactaatgaagggcctgctggtgtaaa
tcgccaccttacagcttttcaattatcacataactttccaattccgtttt
gaatcatcgattaattcaatggcctcctttttagagagagtatagcgtgt
actcccttttggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_37940627_37941562
seq2: B6Ng01-335F17.b_45_979 (reverse)

seq1  ATACTATCTATTAAGTACCCCATAATTTTACATGTCTTTCCCCATATTCC  50
      ||||||| |||||||| |||||||||||  ||||||||||||||||||||
seq2  ATACTATATATTAAGT-CCCCATAATTTACCATGTCTTTCCCCATATTCC  49

seq1  CTCCCACTCCTCCAATTTTTACTTATCATTTCCACTTGACCCTCCATTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCACTCCTCCAATTTTTACTTATCATTTCCACTTGACCCTCCATTCT  99

seq1  AGACCGTTTTAATCCGCCAGAAACTATCTATTCTATTTCCATTTTCTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCGTTTTAATCCGCCAGAAACTATCTATTCTATTTCCATTTTCTAAT  149

seq1  CTTGTTCATTTTTAATTATTTCAAAATTGGAGCTCCCATGGGTTTGTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTCATTTTTAATTATTTCAAAATTGGAGCTCCCATGGGTTTGTGAA  199

seq1  GGTGATAATGTTAATCAATAAATACAACATTTTAGTTTTAGAGGAATAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATAATGTTAATCAATAAATACAACATTTTAGTTTTAGAGGAATAAG  249

seq1  AAACCTTCTGTAAACTAGAATGGCTATGAATAACAGTGCTTTCTTATATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTTCTGTAAACTAGAATGGCTATGAATAACAGTGCTTTCTTATATA  299

seq1  TTTGCAAAAAGTGGAAGTAAAGATTCTGAATAGTGATGTGTTTTGAGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAAAAAGTGGAAGTAAAGATTCTGAATAGTGATGTGTTTTGAGGTT  349

seq1  GCATTGTATTTATTCTAATTTCATTTAAAAATTATAAAGGGAGCATTACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGTATTTATTCTAATTTCATTTAAAAATTATAAAGGGAGCATTACT  399

seq1  AAAATGTAATATTTTACTCAGAGAATATGAACAAATTAATACTTGGTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTAATATTTTACTCAGAGAATATGAACAAATTAATACTTGGTAAA  449

seq1  TAGATAGATAGATATTACATTAAAGACAAATAAAAATCATTAAAAGTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAGATAGATATTACATTAAAGACAAATAAAAATCATTAAAAGTAAA  499

seq1  TAAGGACAAGTAAAATGAAAAAACTAGAGTAAGAACCAATAAACTAATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGACAAGTAAAATGAAAAAACTAGAGTAAGAACCAATAAACTAATTT  549

seq1  AACTGTTATGAAGGACAAATTATCTAACTTATGATTTCCTGATATACGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTTATGAAGGACAAATTATCTAACTTATGATTTCCTGATATACGGC  599

seq1  TTTTGGAAGGGAGTCTGAAATATTCCTATACTTGTTTTGAAAATACATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGAAGGGAGTCTGAAATATTCCTATACTTGTTTTGAAAATACATGA  649

seq1  ATGAATTATTAAAAATCATCTTCACCTTCAGAGAGGAAACATGAATTATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTATTAAAAATCATCTTCACCTTCAGAGAGGAAACATGAATTATC  699

seq1  AAATAAAAACATAATGGCAAATATTATCATTGTACAAAAATATTAGAGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAAACATAATGGCAAATATTATCATTGTACAAAAATATTAGAGAT  749

seq1  ACTGTTTTGAGATTTCATAGGCAGACATATAATAGATCTTTTCTATATAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTTTGAGATTTCATAGGCAGACATATAATAGATCTTTTCTATATAC  799

seq1  ATATAAAATAATAAATGTATATATATGTATATGTATATATATATATAACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAAATAATAAATGTATATATATGTATATGTATATATATATATAACT  849

seq1  ATTACATGCATATATATTCATATAAATTACCTGAATATACTGTGCTTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATGCATATATATTCATATAAATTACCTGAATATACTGTGCTTTTT  899

seq1  TAAAAAAACTAAATATTTATCACATGCAATGAATTC  936
      ||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAACTAAATATTTATCACATGCAATGAATTC  935


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