BAC Information

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BAC

Clone NameB6Ng01-337A04
Chromosome4 (Build37)
Map Location 121,607,055 - 121,608,141
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp69, Smap1l, Col9a2, Zmpste24, Tmco2, LOC100042174, Rlf, OTTMUSG00000008911, EG666914, LOC666921, LOC666927
Downstream geneLOC666931, LOC666937, LOC633269, LOC633279, 9530002B09Rik, Ppt1, Cap1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-337A04.bB6Ng01-337A04.g
ACCGA121765GA121766
length1,2051,083
definitionB6Ng01-337A04.b B6Ng01-337A04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtaggaattcagtgagaaggttacctattcagtaacattcaaa
tgtacttctagtagagactgtgaaactaattaggcattacaaagaatgga
gtcagaatagctcaggactggtctgcagagtgattacttgggacactagc
cagtctcacccacacaagggaattcacaatggcctagctaataggtgggt
ttaccatgtaagagttaggaaatcatacttagacaggaatcttcactaca
gccaggtataacaggctgtattgcatattagaagcaagatggtgaattct
tctgacaaatggagattctccacagatacttaaaagaacagccaagttac
acccatacaaactttatcagggcctaggaaataggggcgttgtcgtatta
cattattcatgagaaggtctgctagagcagaaccctttggtgctagcttt
cacaaggctcaaaggagtagcacaaattgtgagtagggtatgaaaccctt
acctgccattggctgaccctaagcagaactgttttatctttactgcaaat
attacctggttcctgtaagtccttttgaattcattcctttgtgttatgtc
aagtaacttcaatgtacttttcctcctgtgacatcctacccccttcattt
tcggtattacataagactggtgttcaccttgtaacaatactttcagattc
tacacaacttcttttgttgtgtctgtctgtcattcatcgactccttgccc
atctgcaaccagagacccgtcctatgcagacaagggatcaagagggtctg
tggcagtttaacacagacaaaaagctattagggtgggaccctgtctggaa
attattgtttctacctcacctgggcctggactccctatgtcccaggatga
ccttgaactcaagaattgggcctgcatttgtttctgcatgtctttgtatg
tttttgacaaactagatcttagtgtagcttgcttctatccttttagattc
ctgaagccccctcacacaattcatattgcatccttattttttggcacagt
tgagaatagtattttatttttaaaacctcctgcatagctgggcaagtgat
gttgcatacttatgccaggcactttggggagctaaggcaaggccgatttc
tggagtttgaggccaagccttgtgtctctaaccagaagtgtggagatttc
ccagg
gaattcagaggagaggacagtctgggcagagagggtcctagaggagaagt
ggagctgattccagacagctgttgagaagtgcagttgaacagatagggat
ggaaatgatacagtgcagtaactgatctgtaagaggggaatagcctgcag
atctaggcagcagaaagaacaaggaattaagcatgagaaaaatttaagat
atctgtggagatcagagacagagcatgttctgggaagaaatgtgttaagt
ggagagagtacatttaagattggagagtagggaaagcaattgattataag
tttgggttggcagacagacccagcaatcaaaggaccattggtaaattgcc
ttactaaatggcttgtgttaaggttgaggagtatcatccactaatcagag
cttttaaaaggaattcataagaaggacaatgagagaaacccagtacatac
tgggctgatgggtagtatagctattggaatatgtgaagaggtgctagctg
gtgaagtgggttcattatctgagttagatgggcaaagaatgtggttctca
gctcttctcattttgtttaacacatgaagcctggtatttaggctgagaaa
tggccaaaatatatgatgttttaatgtgtccatttagaagccaggaatag
ttgtaatccaagcattcaggaaggtaatgcaagtggacctgtatgagatt
atggctaggctgactacattgtcattttcaggttatgctgggccccagag
agatggagcgtcaagggagagactggaaagagatggaggaagagagaaaa
aagagacagacaaaaagagcaagggagaaaaagacaaaataatgaaaaag
agatcaggaaaaagaaagggggcggaaaaggttttgatgtaaatgacaga
gaccaatcagtcacctcttggtcatgtgaggtttttgaaatatgtgagac
ctagtgaacctagtatgcagggactcggggacaaataatgttggagtaga
gtgacaggaggtgtttcgagaatgattcaaatgatgctaatgtagcagcc
taatatggttaagatacctttggatggaaaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_121607055_121608141
seq2: B6Ng01-337A04.g_64_1146 (reverse)

seq1  CCCTTT-CATCCAAAGTAATCCTTACCATA-TAGGCTGCTACATTAGCAT  48
      |||||| |||||||||  ||| | |||||| |||||||||||||||||||
seq2  CCCTTTCCATCCAAAGGTATCTTAACCATATTAGGCTGCTACATTAGCAT  50

seq1  CATTTGGAATCATTCTCGAAAACACCTCCTGTCACTCTACTCCAAACAAT  98
      ||||| |||||||||||| ||||||||||||||||||||||||||   ||
seq2  CATTT-GAATCATTCTCG-AAACACCTCCTGTCACTCTACTCCAA--CAT  96

seq1  TATTTGTCCCCGAGTCCCCTGCATACTAGGTTCACCTAGGTCTCACATAT  148
      ||||||||||||||| |||||||||||||||||| |||||||||||||||
seq2  TATTTGTCCCCGAGT-CCCTGCATACTAGGTTCA-CTAGGTCTCACATAT  144

seq1  TTCAAAAACCTCACATGACCAAGAGGTGACTGATTGGTCTCTGTCATTTA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAAACCTCACATGACCAAGAGGTGACTGATTGGTCTCTGTCATTTA  194

seq1  CATCAAAACCTTTTCCGCCCCCTTTCTTTTTCCTGATCTCTTTTTCATTA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAAACCTTTTCCGCCCCCTTTCTTTTTCCTGATCTCTTTTTCATTA  244

seq1  TTTTGTCTTTTTCTCCCTTGCTCTTTTTGTCTGTCTCTTTTTTCTCTCTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCTTTTTCTCCCTTGCTCTTTTTGTCTGTCTCTTTTTTCTCTCTT  294

seq1  CCTCCATCTCTTTCCAGTCTCTCCCTTGACGCTCCATCTCTCTGGGGCCC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCATCTCTTTCCAGTCTCTCCCTTGACGCTCCATCTCTCTGGGGCCC  344

seq1  AGCATAACCTGAAAATGACAATGTAGTCAGCCTAGCCATAATCTCATACA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAACCTGAAAATGACAATGTAGTCAGCCTAGCCATAATCTCATACA  394

seq1  GGTCCACTTGCATTACCTTCCTGAATGCTTGGATTACAACTATTCCTGGC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCACTTGCATTACCTTCCTGAATGCTTGGATTACAACTATTCCTGGC  444

seq1  TTCTAAATGGACACATTAAAACATCATATATTTTGGCCATTTCTCAGCCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAATGGACACATTAAAACATCATATATTTTGGCCATTTCTCAGCCT  494

seq1  AAATACCAGGCTTCATGTGTTAAACAAAATGAGAAGAGCTGAGAACCACA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACCAGGCTTCATGTGTTAAACAAAATGAGAAGAGCTGAGAACCACA  544

seq1  TTCTTTGCCCATCTAACTCAGATAATGAACCCACTTCACCAGCTAGCACC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGCCCATCTAACTCAGATAATGAACCCACTTCACCAGCTAGCACC  594

seq1  TCTTCACATATTCCAATAGCTATACTACCCATCAGCCCAGTATGTACTGG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCACATATTCCAATAGCTATACTACCCATCAGCCCAGTATGTACTGG  644

seq1  GTTTCTCTCATTGTCCTTCTTATGAATTCCTTTTAAAAGCTCTGATTAGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCTCATTGTCCTTCTTATGAATTCCTTTTAAAAGCTCTGATTAGT  694

seq1  GGATGATACTCCTCAACCTTAACACAAGCCATTTAGTAAGGCAATTTACC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGATACTCCTCAACCTTAACACAAGCCATTTAGTAAGGCAATTTACC  744

seq1  AATGGTCCTTTGATTGCTGGGTCTGTCTGCCAACCCAAACTTATAATCAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTCCTTTGATTGCTGGGTCTGTCTGCCAACCCAAACTTATAATCAA  794

seq1  TTGCTTTCCCTACTCTCCAATCTTAAATGTACTCTCTCCACTTAACACAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTCCCTACTCTCCAATCTTAAATGTACTCTCTCCACTTAACACAT  844

seq1  TTCTTCCCAGAACATGCTCTGTCTCTGATCTCCACAGATATCTTAAATTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCCAGAACATGCTCTGTCTCTGATCTCCACAGATATCTTAAATTT  894

seq1  TTCTCATGCTTAATTCCTTGTTCTTTCTGCTGCCTAGATCTGCAGGCTAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCATGCTTAATTCCTTGTTCTTTCTGCTGCCTAGATCTGCAGGCTAT  944

seq1  TCCCCTCTTACAGATCAGTTACTGCACTGTATCATTTCCATCCCTATCTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTCTTACAGATCAGTTACTGCACTGTATCATTTCCATCCCTATCTG  994

seq1  TTCAACTGCACTTCTCAACAGCTGTCTGGAATCAGCTCCACTTCTCCTCT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACTGCACTTCTCAACAGCTGTCTGGAATCAGCTCCACTTCTCCTCT  1044

seq1  AGGACCCTCTCTGCCCAGACTGTCCTCTCCTCTGAATTC  1087
      |||||||||||||||||||||||||||||||||||||||
seq2  AGGACCCTCTCTGCCCAGACTGTCCTCTCCTCTGAATTC  1083