BAC Information

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BAC

Clone NameB6Ng01-337C05
Chromosome4 (Build37)
Map Location 93,821,689 - 93,997,239
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC384125, Tusc1
Downstream gene5830433M19Rik, Plaa, LOC667250, Lrrc19, Ift74, Tek, 4930579C15Rik, LOC100039252, Mysm1, LOC100039265, LOC665029, Jun, LOC100042411
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-337C05.bB6Ng01-337C05.g
ACCGA121854GA121855
length1,015349
definitionB6Ng01-337C05.b B6Ng01-337C05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,821,689 - 93,822,704)(93,996,885 - 93,997,239)
sequence
gaattcttttaacatatccttcagcatgcggagtagagggcaacgtccta
aaagggaaaaaaaaaaaagagaaacatctaaatttaaggctaggggaaga
attaaaatccagttcacctttatgctacctattaaaaaagaaaacaacaa
aatgctaagataaaataggggaaaaagttatctacaagttatgttaccct
tatcttaaggggtctccatacctgtattgcttcctcatgagaaaagctat
agacggaggatctttaaatatctacaagccaaatttagtttaatatgctt
ataaataatgcacatgttttaagcatagactgttgccatctctccgttga
tatggtttacccagacacaagccactgatggtgagagatttggccttggg
ttacagttcccagactcattatacagacattatttaaaggatgattacag
cagtccctggaaaacagatcacacatttctttgcaagtacagacaccata
taaagtagtaagagagtacataaccttgaacttgtgagaaagaatagtca
gaaatcaatactgaatatttaaagggaacaacattagggagaaagactta
ttctcctagtaaagtcctgaatccaaacaggacagaacaaatctctctga
gaggaatactttgcacccaacattctcttgggaatcacttgtatgcacgt
tgtttatttttaatgctgaatttttactttgagttgggaaaatatctatt
ttgctaaggcatgctgtcccagaagtatatcttgctaaatctccatttcc
tatgaagataatcttcccctcaacgatgcaccttgcaaagctaagccgag
gacagtgagctctttgaagggaagataaaggcttagaaatatcaagagag
attcttctattgataggaggaaccagtaaatcttttctaatgtggatttg
ctttgacaaattcttgaaagagccatttgtacctcttcatttagactcct
ccattgatgattggg

catatcatgggagaaaaaagcaaaggcattgagacagaaatgggcagata
gcattttcaataatgaagagatgggtctgactgtagaaagatttcatgta
gtctttgtcactggaaacaatcatcctttgcagcaatggttccagtatta
ctctggaaataaagcttgggttagctttatttggatttggatgagagaga
gagagagagagagagagagagagagagagagagagagagtgctcttgcga
gagagagagatcttgccttccatgggggaactgtggggtggacaaagaaa
cgggggacaaatctctaagatgctcttatcttcacttgggattcgaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_93821689_93822704
seq2: B6Ng01-337C05.b_49_1063

seq1  GAATTCTTTTAACATATCCTTCAGCATGCGGAGTAGAGGGCAACGTCCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTAACATATCCTTCAGCATGCGGAGTAGAGGGCAACGTCCTA  50

seq1  AAAGGGAAAAAAAAAAAAGAGAAACATCTAAATTTAAGGCTAGGGGAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGAAAAAAAAAAAAGAGAAACATCTAAATTTAAGGCTAGGGGAAGA  100

seq1  ATTAAAATCCAGTTCACCTTTATGCTACCTATTAAAAAAGAAAACAACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAATCCAGTTCACCTTTATGCTACCTATTAAAAAAGAAAACAACAA  150

seq1  AATGCTAAGATAAAATAGGGGAAAAAGTTATCTACAAGTTATGTTACCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTAAGATAAAATAGGGGAAAAAGTTATCTACAAGTTATGTTACCCT  200

seq1  TATCTTAAGGGGTCTCCATACCTGTATTGCTTCCTCATGAGAAAAGCTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTAAGGGGTCTCCATACCTGTATTGCTTCCTCATGAGAAAAGCTAT  250

seq1  AGACGGAGGATCTTTAAATATCTACAAGCCAAATTTAGTTTAATATGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGGAGGATCTTTAAATATCTACAAGCCAAATTTAGTTTAATATGCTT  300

seq1  ATAAATAATGCACATGTTTTAAGCATAGACTGTTGCCATCTCTCCGTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAATGCACATGTTTTAAGCATAGACTGTTGCCATCTCTCCGTTGA  350

seq1  TATGGTTTACCCAGACACAAGCCACTGATGGTGAGAGATTTGGCCTTGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTTTACCCAGACACAAGCCACTGATGGTGAGAGATTTGGCCTTGGG  400

seq1  TTACAGTTCCCAGACTCATTATACAGACATTATTTAAAGGATGATTACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGTTCCCAGACTCATTATACAGACATTATTTAAAGGATGATTACAG  450

seq1  CAGTCCCTGGAAAACAGATCACACATTTCTTTGCAAGTACAGACACCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCCTGGAAAACAGATCACACATTTCTTTGCAAGTACAGACACCATA  500

seq1  TAAAGTAGTAAGAGAGTACATAACCTTGAACTTGTGAGAAAGAATAGTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTAGTAAGAGAGTACATAACCTTGAACTTGTGAGAAAGAATAGTCA  550

seq1  GAAATCAATACTGAATATTTAAAGGGAACAACATTAGGGAGAAAGACTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCAATACTGAATATTTAAAGGGAACAACATTAGGGAGAAAGACTTA  600

seq1  TTCTCCTAGTAAAGTCCTGAATCCAAACAGGACAGAACAAATCTCTCTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTAGTAAAGTCCTGAATCCAAACAGGACAGAACAAATCTCTCTGA  650

seq1  GAGGAATACTTTGCACCCAACATTCTCTTGGGAATCACTTGTATGCACGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAATACTTTGCACCCAACATTCTCTTGGGAATCACTTGTATGCACGT  700

seq1  TGTTTATTTTTAATGCTGAATTTTTACTTTGAGTTGGGAAAATATCTATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATTTTTAATGCTGAATTTTTACTTTGAGTTGGGAAAATATCTATT  750

seq1  TTGCTAAGGCATGCTGTCCCAGAAGTATATCTTGCTAAATCTCCATTTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAAGGCATGCTGTCCCAGAAGTATATCTTGCTAAATCTCCATTTCC  800

seq1  TATGAAGATAATCTTCCCCTCAACGATGCACCTTGCAAAGCTAAGCCGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAGATAATCTTCCCCTCAACGATGCACCTTGCAAAGCTAAGCCGAG  850

seq1  GACAGTGAGCTCTTTGAAGGGAAGATAAAGGCTTAGAAATATCAAGAGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTGAGCTCTTTGAAGGGAAGATAAAGGCTTAGAAATATCAAGAGAG  900

seq1  ATTCTTCTATTGATAGGAGGAAACCAGTAAATCTTTTCTAATGTGGATTT  950
      |||||||||||||||||||| |||||||||||||||||||||||||| ||
seq2  ATTCTTCTATTGATAGGAGG-AACCAGTAAATCTTTTCTAATGTGGA-TT  948

seq1  TGCTTTGACAAATTCTTGAAAGAGCCATTTGTACCTCTTCATTTAGACT-  999
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TGCTTTGACAAATTCTTGAAAGAGCCATTTGTACCTCTTCATTTAGACTC  998

seq1  CTCCATTGATGATTGGG  1016
      |||||||||||||||||
seq2  CTCCATTGATGATTGGG  1015


seq1: chr4_93996885_93997239
seq2: B6Ng01-337C05.g_66_420 (reverse)

seq1  TTTTCAAATCCCAAGTGAAGATAAGAGCATCTTAGAGATTTCTCCACCGT  50
      ||||| ||||||||||||||||||||||||||||||||||| ||| ||||
seq2  TTTTCGAATCCCAAGTGAAGATAAGAGCATCTTAGAGATTTGTCCCCCGT  50

seq1  TTCTTTGTCCACCCCACAGTACCCCCATGGTAGCCAAGTTCTCTCTCTCT  100
      |||||||||||||||||||| ||||||||| || |||| |||||||||||
seq2  TTCTTTGTCCACCCCACAGTTCCCCCATGGAAGGCAAGATCTCTCTCTCT  100

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  150
      | |     | ||||||||||||||||||||||||||||||||||||||||
seq2  CGCAAGAGCACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  150

seq1  CTCTCTCATCCAAATCCAAATAAAGCTAACCCAAGCTTTATTTCCAGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCATCCAAATCCAAATAAAGCTAACCCAAGCTTTATTTCCAGAGT  200

seq1  AATACTGGAACCATTGCTGCAAAGGATGATTGTTTCCAGTGACAAAGACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTGGAACCATTGCTGCAAAGGATGATTGTTTCCAGTGACAAAGACT  250

seq1  ACATGAAATCTTTCTACAGTCAGACCCATCTCTTCATTATTGAAAATGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAAATCTTTCTACAGTCAGACCCATCTCTTCATTATTGAAAATGCT  300

seq1  ATCTGCCCATTTCTGTCTCAATGCCTTTGCTTTTTTCTCCCATGATATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCCCATTTCTGTCTCAATGCCTTTGCTTTTTTCTCCCATGATATGG  350

seq1  AATTC  355
      |||||
seq2  AATTC  355


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