BAC Information

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BAC

Clone NameB6Ng01-337I15
Chromosome4 (Build37)
Map Location 145,729,508 - 145,730,609
singlet/doubletsinglet
Overlap geneLOC433791
Upstream geneVps13d, Tnfrsf1b, Tnfrsf8, LOC666282, 9230115A19Rik, LOC195576, LOC622846, LOC666314, LOC545701, OTTMUSG00000010965, LOC666334, LOC545703, LOC384081, LOC100041379, LOC666349, LOC666351, LOC545704, 1700029I01Rik, LOC236069, LOC384084, LOC666386, LOC666390, LOC100041433, LOC433790
Downstream geneRex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-337I15.g
ACCGA122132
length1,109
definitionB6Ng01-337I15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatcagagaattcatacaggagagaaaccttacaaatgtagtgaa
tgtgacaaatgctttactgaaaaaggccatcaaagaattcatacaggaga
gataccttacaaatagtttgtatgtgacaaatacaatacaatgtcagtct
gagaaatcatcagtttttaatacagtagagaatatttataaatgaagtga
acgagacaatcctttaccaagatatatcatcttaaaaatcattagagaat
acttacagaagagaaacttttcaattatatcaaaggtatgaatcctttac
tcttggcctatttcctagaatgttaacagtgaatacttacaggatacaaa
cttaactcatgcattgtatgaagaaatatctttgacttcatttcaggtca
aagagaatatctaataactttttaggggaaagtatttctgttggggaaag
tgtggcctgtgttttattcacgttctattcttgacaacaattgaggctcc
acactagagaattagtatgattatgaaaatcatgtgaaaactttcatgca
atgttcaaatcttaaataatgtcaactattttttgcttgaagaaactctg
aaaatgtaaaaatgtagaaagcttttcatgatacctttttacttgttcac
ccttaaatgttacaagatgaagacaagttgggaagtgaggagatattatt
gtgtaacacattcattgagacagaaataatccatttcaaaaggaaactat
ttaaggtctttaatgcagtcctcaaaatatctaataaaactggtaacatt
ctgtatatttaattcaatgagccaattgagaaaaattatacttaaaagaa
tatctggcaaactgagccacccagacagcatattctttatcctataaata
tgcttacagatgtgaagtgtgcttcaagtattcagtaataataattcttc
tcaaatgcttggttcacattataggataacacctgatcattatttcccat
tttattggaacgaaaagttcttattaggtcctctgaaaatgctggactcg
ttgatacattattaacaagaacattgtgtgtctgatccttgttgtgccta
tactccact
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_145729508_145730609
seq2: B6Ng01-337I15.g_66_1174 (reverse)

seq1  AGTGGAGTATTAAGGCACAAC-AGGACCAGACACCACAATG-TCTTG-TA  47
      ||||||||||  ||||||||| |||| |||||| ||||||| ||||| ||
seq2  AGTGGAGTAT--AGGCACAACAAGGATCAGACA-CACAATGTTCTTGTTA  47

seq1  AT-ATGTATCAACG-GT-CAGCATTTTTCAGA-GACCT-ATAGGA--CTT  90
      || ||||||||||| || ||||| |||||||| ||||| ||| ||   ||
seq2  ATAATGTATCAACGAGTCCAGCA-TTTTCAGAGGACCTAATAAGAACTTT  96

seq1  TCGTT-CAAT-AAATGGGAAATAATGATCAGTTGTTATCCTATAATGTGA  138
      ||||| |||| |||||||||||||||||||| ||||||||||||||||||
seq2  TCGTTCCAATAAAATGGGAAATAATGATCAGGTGTTATCCTATAATGTGA  146

seq1  ACCAAGCATTTGAGAAGAATTATTATTACTGAATACTCGAAGCACACTTC  188
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ACCAAGCATTTGAGAAGAATTATTATTACTGAATACTTGAAGCACACTTC  196

seq1  ACATCTGTAAGCATATTTATAGGATAAAGAATATGCTGTCTGGGTGGCTC  238
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTGTAAGCATATTTATAGGATAAAGAATATGCTGTCTGGGTGGCTC  246

seq1  AGTTTGCCAGATATTCTTTTAAGTATAATTTTTCTCAATTGGCTCATTTG  288
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AGTTTGCCAGATATTCTTTTAAGTATAATTTTTCTCAATTGGCTCA-TTG  295

seq1  AATTAAATATACAGAATGTTACCAGTTTTATTAGATATTTTGAGGACTGC  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAATATACAGAATGTTACCAGTTTTATTAGATATTTTGAGGACTGC  345

seq1  ATTAAAGACCTTAAATAGTTTCCTTTTGAAATGGATTATTTCTGTCTCAA  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGACCTTAAATAGTTTCCTTTTGAAATGGATTATTTCTGTCTCAA  395

seq1  TGAATGTGTTACACAATAATATCTCCTCACTTCCCAACTTGTCTTCATCT  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGTGTTACACAATAATATCTCCTCACTTCCCAACTTGTCTTCATCT  445

seq1  TGTAACATTTAAGGGTGAACAAGTAAAAAGGTATCATGAAAAGCTTTCTA  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACATTTAAGGGTGAACAAGTAAAAAGGTATCATGAAAAGCTTTCTA  495

seq1  CATTTTTACATTTTCAGAGTTTCTTCAAGCAAAAAATAGTTGACATTATT  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTACATTTTCAGAGTTTCTTCAAGCAAAAAATAGTTGACATTATT  545

seq1  TAAGATTTGAACATTGCATGAAAGTTTTCACATGATTTTCATAATCATAC  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATTTGAACATTGCATGAAAGTTTTCACATGATTTTCATAATCATAC  595

seq1  TAATTCTCTAGTGTGGAGCCTCAATTGTTGTCAAGAATAGAACGTGAATA  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCTCTAGTGTGGAGCCTCAATTGTTGTCAAGAATAGAACGTGAATA  645

seq1  AAACACAGGCCACACTTTCCCCAACAGAAATACTTTCCCCTAAAAAGTTA  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACAGGCCACACTTTCCCCAACAGAAATACTTTCCCCTAAAAAGTTA  695

seq1  TTAGATATTCTCTTTGACCTGAAATGAAGTCAAAGATATTTCTTGATACA  738
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTAGATATTCTCTTTGACCTGAAATGAAGTCAAAGATATTTCTTCATACA  745

seq1  ATGCATGAGTTAAGTTTGTATCCTGTAAGTATTCACTGTTAACATTCTAG  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATGAGTTAAGTTTGTATCCTGTAAGTATTCACTGTTAACATTCTAG  795

seq1  GAAATAGGCCAAGAGTAAAGGATTCATACCTTTGATATAATTGAAAAGTT  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGGCCAAGAGTAAAGGATTCATACCTTTGATATAATTGAAAAGTT  845

seq1  TCTCTTCTGTAAGTATTCTCTAATGATTTTTAAGATGATATATCTTGGTA  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCTGTAAGTATTCTCTAATGATTTTTAAGATGATATATCTTGGTA  895

seq1  AAGGATTGTCTCGTTCACTTCATTTATAAATATTCTCTACTGTATTAAAA  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATTGTCTCGTTCACTTCATTTATAAATATTCTCTACTGTATTAAAA  945

seq1  ACTGATGATTTCTCAGACTGACATTGTATTGTATTTGTCACATACAAACT  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATGATTTCTCAGACTGACATTGTATTGTATTTGTCACATACAAACT  995

seq1  ATTTGTAAGGTATCTCTCCTGTATGAATTCTCTGATGGCCTTTTTCAGTA  1038
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATTTGTAAGGTATCTCTCCTGTATGAATTCTTTGATGGCCTTTTTCAGTA  1045

seq1  AAGCATTTGTCACATTCACTACATTTGTAAGGTTTCTCTCCTGTATGAAT  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATTTGTCACATTCACTACATTTGTAAGGTTTCTCTCCTGTATGAAT  1095

seq1  TCTCTGATGAATTC  1102
      ||||||||||||||
seq2  TCTCTGATGAATTC  1109