BAC Information

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BAC

Clone NameB6Ng01-338L19
Chromosome4 (Build37)
Map Location 38,639,990 - 38,641,006
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC277771, LOC100039448, LOC665520
Downstream geneLOC100039487, 1700009N14Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-338L19.bB6Ng01-338L19.g
ACCGA122937GA122938
length995273
definitionB6Ng01-338L19.b B6Ng01-338L19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattgaagacatcatagaataatttcccaccttatttgttgcttt
cccttcataggttaattcacctaagcttagctccctacatatgctctcat
aaaagtcactgttgcaagatttttctctatcttataattttctggaatat
attcactggttttctctgtttaaaataatttacttacttcaatgacagta
acatccttatactccctctatttctcattttaaacagaataattcttact
gacttactcattaagatctcatgcagagtttcttgtaaatctataacctc
cttgtaaaaatttataatatacatccaataccattggaaacacaatgatt
cattgattttatgtctttggcttgcatattctctgaagttaaacctttat
atctacttggaatccattcttggcagtttcagtgctgatttggatctaac
acaataaagcttcataatcctgtccctatgcaggaggatttttttctgct
tccctttttcgttttaggggcagctccactcacccaatattgtaaggcaa
tctgcaaatgaatctggaggtcttttccactccagcttccatgtatgttt
catttctcattgctttaaatcatttgctgatatatcttgattttatttca
ttttccacatttctccttattagtgtatattctcagtctttattgccact
cacactattttattaatatgacacctgaaacaatttcttttcatgaactc
ttgtttcaattgaatcaataattatccataagctgtcattctgatcatgt
cattaaaaattatcatatcagtagtttctttgtcagtaatttttcttatt
gttgttcaatccctcaagaatataatgtcaattctatacctctagactag
ggatgaaagaatgatttcctctggtaatactgaactttcattccattcaa
tgaattacttcatttgacacagtgtcattctaatgcattgcagga

ctttccttccagccttgatataagggctttttcctagtcttattctatct
ttgttttggtctgtttgactgttgtctcttagaggcttgctctttcgggg
aaaaggagggggagagggtctgtagaagagtggaggtgaaggagaacctt
ggagtcttggagagtgaaggagaaagtggtaggattggagggagggaacc
tatggtcagggtgtattattatgaaagaagaatccatttccacttcagag
aaaagtcatctcaaaagtcaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_38639990_38641006
seq2: B6Ng01-338L19.b_47_1041 (reverse)

seq1  TCCTGCAGTGGATTAGAAATGACACTTGTGTCAAAAATGAAGTAATATTC  50
      ||||||| || ||||| |||||||| ||||||  ||||||||||  ||||
seq2  TCCTGCAATGCATTAG-AATGACAC-TGTGTC--AAATGAAGTA--ATTC  44

seq1  TATTTAAAATGAAATGATAGTCTAGTTATTTAACCCAGAGAAAATCATTC  100
       |||   |||| ||||| |||  || ||||    |||||| |||||||||
seq2  -ATT--GAATGGAATGAAAGTTCAG-TATT---ACCAGAGGAAATCATTC  87

seq1  TTTCATCCCTAGTCTAGA-GTATAGAATTTGACATTTATATTCTTTGAGG  149
      |||||||||||||||||| |||||||| |||||| |||||||| ||||||
seq2  TTTCATCCCTAGTCTAGAGGTATAGAA-TTGACA-TTATATTC-TTGAGG  134

seq1  ATTTGAACAACAAT-AGAAAAATTTTAACTGGACAAAGAAACTACTGATA  198
        |||||||||||| |||||||||   ||| |||||||||||||||||||
seq2  GATTGAACAACAATAAGAAAAATT---ACT-GACAAAGAAACTACTGATA  180

seq1  TGATAATTTTTTAATGACAATGAATCAGAATGACAGCCTTATGGATAATT  248
      |||||| ||||||||||| ||| ||||||||||||| |||||||||||||
seq2  TGATAA-TTTTTAATGAC-ATG-ATCAGAATGACAG-CTTATGGATAATT  226

seq1  ATTGATTCAATTGAAACAAGAGTTCATGAAAAGAAATTGTTTCAGGTGTC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATTCAATTGAAACAAGAGTTCATGAAAAGAAATTGTTTCAGGTGTC  276

seq1  ATATTAATAAAATAGTGTGAGTGGCAATAAAGACTGAGAATATACACTAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAATAAAATAGTGTGAGTGGCAATAAAGACTGAGAATATACACTAA  326

seq1  TAAGGAGAAATGTGGAAAATGAAATAAAATCAAGATATATCAGCAAATGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAGAAATGTGGAAAATGAAATAAAATCAAGATATATCAGCAAATGA  376

seq1  TTTAAAGCAATGAGAAATGAAACATACATGGAAGCTGGAGTGGAAAAGAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGCAATGAGAAATGAAACATACATGGAAGCTGGAGTGGAAAAGAC  426

seq1  CTCCAGATTCATTTGCAGATTGCCTTACAATATTGGGTGAGTGGAGCTGC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGATTCATTTGCAGATTGCCTTACAATATTGGGTGAGTGGAGCTGC  476

seq1  CCCTAAAACGAAAAAGGGAAGCAGAAAAAAATCCTCCTGCATAGGGACAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAAACGAAAAAGGGAAGCAGAAAAAAATCCTCCTGCATAGGGACAG  526

seq1  GATTATGAAGCTTTATTGTGTTAGATCCAAATCAGCACTGAAACTGCCAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATGAAGCTTTATTGTGTTAGATCCAAATCAGCACTGAAACTGCCAA  576

seq1  GAATGGATTCCAAGTAGATATAAAGGTTTAACTTCAGAGAATATGCAAGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGATTCCAAGTAGATATAAAGGTTTAACTTCAGAGAATATGCAAGC  626

seq1  CAAAGACATAAAATCAATGAATCATTGTGTTTCCAATGGTATTGGATGTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGACATAAAATCAATGAATCATTGTGTTTCCAATGGTATTGGATGTA  676

seq1  TATTATAAATTTTTACAAGGAGGTTATAGATTTACAAGAAACTCTGCATG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATAAATTTTTACAAGGAGGTTATAGATTTACAAGAAACTCTGCATG  726

seq1  AGATCTTAATGAGTAAGTCAGTAAGAATTATTCTGTTTAAAATGAGAAAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTTAATGAGTAAGTCAGTAAGAATTATTCTGTTTAAAATGAGAAAT  776

seq1  AGAGGGAGTATAAGGATGTTACTGTCATTGAAGTAAGTAAATTATTTTAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGAGTATAAGGATGTTACTGTCATTGAAGTAAGTAAATTATTTTAA  826

seq1  ACAGAGAAAACCAGTGAATATATTCCAGAAAATTATAAGATAGAGAAAAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAAAACCAGTGAATATATTCCAGAAAATTATAAGATAGAGAAAAA  876

seq1  TCTTGCAACAGTGACTTTTATGAGAGCATATGTAGGGAGCTAAGCTTAGG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCAACAGTGACTTTTATGAGAGCATATGTAGGGAGCTAAGCTTAGG  926

seq1  TGAATTAACCTATGAAGGGAAAGCAACAAATAAGGTGGGAAATTATTCTA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTAACCTATGAAGGGAAAGCAACAAATAAGGTGGGAAATTATTCTA  976

seq1  TGATGTCTTCAATGAATTC  1017
      |||||||||||||||||||
seq2  TGATGTCTTCAATGAATTC  995


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