BAC Information

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BAC

Clone NameB6Ng01-338P06
Chromosome4 (Build37)
Map Location 72,726,320 - 72,727,038
singlet/doubletsinglet
Overlap genenone
Upstream geneTle1, Aldoa-ps2, EG384113, LOC667713, LOC100039698
Downstream geneOTTMUSG00000001246, LOC100039726, LOC667722, LOC623115, OTTMUSG00000000281, OTTMUSG00000000280, OTTMUSG00000000282, OTTMUSG00000000283, Gm428, Rasef, LOC667768, LOC545637, LOC623272, OTTMUSG00000014862, OTTMUSG00000004010, 2310002L09Rik, Frmd3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-338P06.bB6Ng01-338P06.g
ACCGA123089GA123090
length1,160719
definitionB6Ng01-338P06.b B6Ng01-338P06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tctacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgttggtg
ggattacaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccagatgatccagtaatacctctcctgggc
atatatccagaagatgccccaactggtaagaagggcacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gccccttaacagaggaatggatacagaaaatgtggtacatctacacaatg
gtgtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagagtgaagactgaagtgtggacactatgcccctccttagaattggtaa
caaaacacccatggaaggagttacaaagtttggagctgagatgaaaggat
ggaccatgtagagactgccatatccagggatccaccccataatcagcatc
caaacgctgacaccattgcatacactagcaagattttatcgaaaggaccc
agatgtagctgtctcttgtgagactatgccggggcctagcaaacacagaa
gtggatgctcacagtcagctaatggatggatcacagggctcccaatggag
gagctagaaaatgtaaccaaggagctaaagggacctgcaaccctatagtg
gaacacattatgactaacagtacccgagctctgactctagctgcatatgt
atcaaagatggcctagtcgcatcactgaagagagtccatgacacgcatac
tttatatgcccagtacagtactcagggccaaagtggggagtgggtgtgat
tagggggagt
gaattccattatgtgcacattctcggctcctccttttccccatttttgtc
ctaatctttacagggagagaaatcactaacaaggccatgaggatattggg
gatggatttaagacagggagaaagaacagaaaaagtggttgttatataaa
aaaataattaatgcattatttcataaagtttactgcctgacgagtagcag
gcttctaaaggggttcaagtacaggtctgaatgtaagagtataggactag
gattaaggaagaatgaacatgtcactctattgtgagaagttattgtatct
gaagcagggggtggggcagagtatattttgtgggcctactgatgttttaa
atgagactgtgtgtaaacacgaaacatgttaaatatataaaagtctcagt
tataaatattggtacaaagccgagcttggtggcacacgccttaatcccag
cactcaggaggcagaggcaggtggatttctgagttcgaggacagcctggt
ctacaaagtgagttccaggacagccaggactatacagagaaaccctgtct
tgagaaaccaaaataaataaataaataaataaataaataaataaataaat
aaataaatattggtacaaaaactcattaattctacctattctattgtgtg
tacgctgtagctcttagcagagaagataaccagtcccaggacaggtggta
atggtgatggtagtggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_72726320_72727038
seq2: B6Ng01-338P06.g_66_784 (reverse)

seq1  CCACCACTACCATCACCATTACCACCTGTCCTGGGACTGGTTATCTTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCACTACCATCACCATTACCACCTGTCCTGGGACTGGTTATCTTCTC  50

seq1  TGCTAAGAGCTACAGCGTACACACAATAGAATAGGTAGAATTAATGAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAAGAGCTACAGCGTACACACAATAGAATAGGTAGAATTAATGAGTT  100

seq1  TTTGTACCAATATTTATTTATTTATTTATTTATTTATTTATTTATTTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTACCAATATTTATTTATTTATTTATTTATTTATTTATTTATTTATT  150

seq1  TATTTATTTTGGTTTCTCAAGACAGGGTTTCTCTGTATAGTCCTGGCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTTTGGTTTCTCAAGACAGGGTTTCTCTGTATAGTCCTGGCTGT  200

seq1  CCTGGAACTCACTTTGTAGACCAGGCTGTCCTCGAACTCAGAAATCCACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAACTCACTTTGTAGACCAGGCTGTCCTCGAACTCAGAAATCCACC  250

seq1  TGCCTCTGCCTCCTGAGTGCTGGGATTAAGGCGTGTGCCACCAAGCTCGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTGCCTCCTGAGTGCTGGGATTAAGGCGTGTGCCACCAAGCTCGG  300

seq1  CTTTGTACCAATATTTATAACTGAGACTTTTATATATTTAACATGTTTCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTACCAATATTTATAACTGAGACTTTTATATATTTAACATGTTTCG  350

seq1  TGTTTACACACAGTCTCATTTAAAACATCAGTAGGCCCACAAAATATACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACACACAGTCTCATTTAAAACATCAGTAGGCCCACAAAATATACT  400

seq1  CTGCCCCACCCCCTGCTTCAGATACAATAACTTCTCACAATAGAGTGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCCACCCCCTGCTTCAGATACAATAACTTCTCACAATAGAGTGACA  450

seq1  TGTTCATTCTTCCTTAATCCTAGTCCTATACTCTTACATTCAGACCTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCATTCTTCCTTAATCCTAGTCCTATACTCTTACATTCAGACCTGTA  500

seq1  CTTGAACCCCTTTAGAAGCCTGCTACTCGTCAGGCAGTAAACTTTATGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAACCCCTTTAGAAGCCTGCTACTCGTCAGGCAGTAAACTTTATGAA  550

seq1  ATAATGCATTAATTATTTTTTTATATAACAACCACTTTTTCTGTTCTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGCATTAATTATTTTTTTATATAACAACCACTTTTTCTGTTCTTTC  600

seq1  TCCCTGTCTTAAATCCATCCCCAATATCCTCATGGCCTTGTTAGTGATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGTCTTAAATCCATCCCCAATATCCTCATGGCCTTGTTAGTGATTT  650

seq1  CTCTCCCTGTAAAGATTAGGACAAAAATGGGGAAAAGGAGGAGCCGAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCTGTAAAGATTAGGACAAAAATGGGGAAAAGGAGGAGCCGAGAA  700

seq1  TGTGCACATAATGGAATTC  719
      |||||||||||||||||||
seq2  TGTGCACATAATGGAATTC  719