BAC Information

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BAC

Clone NameB6Ng01-339N15
Chromosome4 (Build37)
Map Location 16,894,885 - 16,895,968
singlet/doubletsinglet
Overlap genenone
Upstream geneNbn, Osgin2, Ripk2, LOC667150, LOC383994
Downstream geneLOC100040154, LOC667212, LOC100040173, Mmp16
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-339N15.bB6Ng01-339N15.g
ACCGA123734GA123735
length4891,078
definitionB6Ng01-339N15.b B6Ng01-339N15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccacactctgtccatgtgtatttaacatagtacttgaagtcttag
cttagttgttgaagtcaataagaaaacagaaggagatcaagtagatgcaa
attggaaaggaaaactctattatttacagatgctatgatagcatatataa
gtgaccctaaaattccactagtgaactcttactgataataaacactctca
gcaaagtagctggataataaaatcactcacaagaaactaagtaaccctcc
tatatacaaatggtaactggactaagaagggagtcaaggaaaccacacca
ttcacaatatggaaagatttcacattttcatgaaccagtagaattaacag
taaaagtgtcaagccatcctaccaaaatgaatctaaagaatcaatacaat
ccacattaaaatgctcacagtcagctattggatggatcacagggccccca
atggaggagctagagaaagtacccaaggagctaaaggga

gaattctggatttattactttgcagtgggtgggtagaccaatccctcaac
cggaagccatgcctatctatctactggctgtagactctacaggttctata
tcacctttgtcgggtattttggctaatgttcttcctattggatcctggga
acctattgggttcctgtcatctgggactttccggtgaatgtccctacttc
tccctccccaactgctacacactgtaatctgtacctttccttgatctcct
cccttatctgaaccaggatccccttttccctcctccttccctctccatcc
cagatccctctttccctaacatcctgagattattttcttcacccttatga
gtaggactatagtgttcacactttggtttggtcttttttcttcttgggtt
tcattttttttaaatatgaagtatcttttttcccacaccagtatattgcc
atcactgtatgtatgttcttcctttagtcattttgcaatgactagactaa
ttcagagcacccatcttattcctattctctctgaaccccaaaacctgctt
tctctgtgcttcctttgcaatatctgactatataatgttcatacctaacc
aagcttcctgtgtgtgtatgtgttgtttcatgttcacaaaataaaatata
ttggtatatttaagtaaaataatttttttgactgggttagatattgggac
tggaaatttacagcagttactctggccaatatgagtcttgaagttcactt
tcaaagataaatgatctcaatctgcaagacacatctaacattaattatca
atgctcaacctaaatatcatttaccttattaccatttgctacaaagcatt
tacagtcaagcaaacagcaagttattttagtggctgcagcatctcaccag
tccatggagaaactgcccaagtatcgtcaagagcctctgattacttgtac
ctgtcctccttcagacagttttaatgctcgcctcagctttcagtcacagc
tccctcatgcaatttcttaaatatcaaaaatacaacacatttgagattct
gaataatcagagagcatagatggacatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_16894885_16895968
seq2: B6Ng01-339N15.g_66_1143 (reverse)

seq1  AATGTTCATCTATGCTCTCTGGTTTATCAGAATCTCAAATGTTGTTGTAT  50
      ||||| ||||||||||||||| ||  ||||||||||||||| ||||||||
seq2  AATGTCCATCTATGCTCTCTGATTATTCAGAATCTCAAATG-TGTTGTAT  49

seq1  TTTTGGATATTTAAGAAA-TGCATGAGGGAGCTGGTTGACTGAAAGCTGA  99
      |||| ||||||||||||| |||||||||||||||  ||||||||||||||
seq2  TTTT-GATATTTAAGAAATTGCATGAGGGAGCTG--TGACTGAAAGCTGA  96

seq1  GGCGAGCATTAAAACTTGTCTGAAGGAGGACAGGTACAAGTAATCAGAGG  149
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GGCGAGCATTAAAAC-TGTCTGAAGGAGGACAGGTACAAGTAATCAGAGG  145

seq1  CTCTTGACGATACTTGGGCAGTTTTCTCCATGGACTGGTGAGATGCTGCA  199
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTCTTGACGATACTTGGGCAG-TTTCTCCATGGACTGGTGAGATGCTGCA  194

seq1  GCCACTAAAATAACTTGCTGTTTGCTTTGACTGTAAATGCTTTGTAGCAA  249
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GCCACTAAAATAACTTGCTGTTTGC-TTGACTGTAAATGCTTTGTAGCAA  243

seq1  ATGGTAATAAGGTAAATGATATTTAGGTTGAGCATTGATAATTAATGTTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAATAAGGTAAATGATATTTAGGTTGAGCATTGATAATTAATGTTA  293

seq1  GATGTGTCTTGCAGATTGAGATCATTTATCTTTGAAAGTGAACTTCAAGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGTCTTGCAGATTGAGATCATTTATCTTTGAAAGTGAACTTCAAGA  343

seq1  CTCATATTGGCCAGAGTAACTGCTGTAAATTTCCAGTCCCAATATCTAAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATATTGGCCAGAGTAACTGCTGTAAATTTCCAGTCCCAATATCTAAC  393

seq1  CCAGTCAAAAAAATTATTTTACTTAAATATACCAATATATTTTATTTTGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCAAAAAAATTATTTTACTTAAATATACCAATATATTTTATTTTGT  443

seq1  GAACATGAAACAACACATACACACACAGGAAGCTTGGTTAGGTATGAACA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGAAACAACACATACACACACAGGAAGCTTGGTTAGGTATGAACA  493

seq1  TTATATAGTCAGATATTGCAAAGGAAGCACAGAGAAAGCAGGTTTTGGGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATAGTCAGATATTGCAAAGGAAGCACAGAGAAAGCAGGTTTTGGGG  543

seq1  TTCAGAGAGAATAGGAATAAGATGGGTGCTCTGAATTAGTCTAGTCATTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAGAGAATAGGAATAAGATGGGTGCTCTGAATTAGTCTAGTCATTG  593

seq1  CAAAATGACTAAAGGAAGAACATACATACAGTGATGGCAATATACTGGTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGACTAAAGGAAGAACATACATACAGTGATGGCAATATACTGGTG  643

seq1  TGGGAAAAAAGATACTTCATATTTAAAAAAAATGAAACCCAAGAAGAAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAAAAAGATACTTCATATTTAAAAAAAATGAAACCCAAGAAGAAAA  693

seq1  AAGACCAAACCAAAGTGTGAACACTATAGTCCTACTCATAAGGGTGAAGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCAAACCAAAGTGTGAACACTATAGTCCTACTCATAAGGGTGAAGA  743

seq1  AAATAATCTCAGGATGTTAGGGAAAGAGGGATCTGGGATGGAGAGGGAAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATCTCAGGATGTTAGGGAAAGAGGGATCTGGGATGGAGAGGGAAG  793

seq1  GAGGAGGGAAAAGGGGATCCTGGTTCAGATAAGGGAGGAGATCAAGGAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGGGAAAAGGGGATCCTGGTTCAGATAAGGGAGGAGATCAAGGAAA  843

seq1  GGTACAGATTACAGTGTGTAGCAGTTGGGGAGGGAGAAGTAGGGACATTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACAGATTACAGTGTGTAGCAGTTGGGGAGGGAGAAGTAGGGACATTC  893

seq1  ACCGGAAAGTCCCAGATGACAGGAACCCAATAGGTTCCCAGGATCCAATA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGGAAAGTCCCAGATGACAGGAACCCAATAGGTTCCCAGGATCCAATA  943

seq1  GGAAGAACATTAGCCAAAATACCCGACAAAGGTGATATAGAACCTGTAGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAACATTAGCCAAAATACCCGACAAAGGTGATATAGAACCTGTAGA  993

seq1  GTCTACAGCCAGTAGATAGATAGGCATGGCTTCCGGTTGAGGGATTGGTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACAGCCAGTAGATAGATAGGCATGGCTTCCGGTTGAGGGATTGGTC  1043

seq1  TACCCACCCACTGCAAAGTAATAAATCCAGAATTC  1084
      |||||||||||||||||||||||||||||||||||
seq2  TACCCACCCACTGCAAAGTAATAAATCCAGAATTC  1078


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