BAC Information

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BAC

Clone NameB6Ng01-341G10
Chromosome4 (Build37)
Map Location 64,052,212 - 64,088,995
singlet/doubletdoublet
Overlap genenone
Upstream geneAkna, Whrn, Atp6v1g1, 6330416G13Rik, LOC670833, 1700018C11Rik, LOC667451, Tnfsf15, Tnfsf8, Rpl17-ps, Tnc
Downstream genePappa, Astn2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-341G10.bB6Ng01-341G10.g
ACCGA124792GA124793
length2501,136
definitionB6Ng01-341G10.b B6Ng01-341G10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,052,212 - 64,052,462)(64,087,862 - 64,088,995)
sequence
taggaatccaaggaagactcacattatcagttgttcatcttgacttaagc
aaaatatctgcctgtgtcttaagtccaataagtattttgaggcaaaacaa
tagcaacaacaacaaaaagaaagaggagaggagaggagaggagaggagag
gagaggagaggagaggagaggagaggagaggagaggagagaagagaagag
aagaggagacgagaggataggaaaggaagagtttctggagaaatcatata

gaattcaagactcatgtaacaatccagactgtggctgtgttaacaatgag
aagaagctgagtgtactatacaaaaatggaagcaagggtggactggatat
gaaactcaattatttgtgggggagctgagagaattggggatagtaaggca
aagccaaactctttggtatggatacacagaaacacaggtgctgccaacta
cataaaaggcaatagaagggagagtttcatcaaagacatctacttctctc
ttacagagctgctttgtatgcctggacatatcccatacttattgaatgtc
tgggactctgcaaaggactcctatgtaggaggtaagcaccccccttgaag
cctgcaatgtttaaatggatggaagtactcaaaatgtctggaaaatattt
catcatttcattagaagtgacctaactgtgaaagtgtctatttggaacca
gccccaattctcaaacttcttaaaggcttttcctcccaagaggaaagtaa
agtaagcaatgttcactccaaccaccacacacacacacacacacacacac
acacacacacacacacgcacacacagggtcaggaattttgtgagcatcaa
tgctgggaagagctaattcatctaagaaaatgagagtaggcagtaatcca
tggaagagtgctcctgaaggcagaacagcactgaaatggggcttgatgga
tcagagctttccactggcctaataatatgaactgccctgattgatgaccc
tgatacacacaagggggagggaagcaactcctcaagtgaaaggatacaat
attagcactcccttcaggcctatgactttcattgtcaagtgaaaaatatc
taaatcccagagcaagggcacagctccaccaatgtgaacttcccaaaggt
catcttgtaaagtttatattgtagtctaagagatgtggaggaaacttgca
caagatcaaagagtatttaaaagtccacaccgatttacttgttgtgataa
gaaagttatggttaaggacttgagcttcatattgaaaggcgtatttcgaa
cagcagcagcgtcgcatcttgttcgagacccgccgaccttaggaaattga
atctgaacaggtgaaagggtgcgccaggaacctgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_64052212_64052462
seq2: B6Ng01-341G10.b_51_300

seq1  TAGGAATCCAAGGAAGACTCACATTATCAGTTGTTCATCTTGACTTAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAATCCAAGGAAGACTCACATTATCAGTTGTTCATCTTGACTTAAGC  50

seq1  AAAATATCTGCCTGTGTCTTAAGTCCAATAAGTATTTTGAGGCAAAACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATCTGCCTGTGTCTTAAGTCCAATAAGTATTTTGAGGCAAAACAA  100

seq1  TAGCAACAACAACAAAAAGAAAGAGGAGAGGAGAGGAGAGGAGAGGAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAACAACAACAAAAAGAAAGAGGAGAGGAGAGGAGAGGAGAGGAGAG  150

seq1  GAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGAAGAGAAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGAAGAGAAGAG  200

seq1  AAGAGGAGAGGAGAGGAGAGGAGAGGAGAAGTATCTGGAGAAATACATAT  250
      ||||||||| ||||||| |||| ||||  ||| ||||||||||| |||||
seq2  AAGAGGAGACGAGAGGATAGGAAAGGAAGAGTTTCTGGAGAAAT-CATAT  249

seq1  A  251
      |
seq2  A  250

seq1: chr4_64087862_64088995
seq2: B6Ng01-341G10.g_66_1201 (reverse)

seq1  GTCAGGTTCTCTGGCGCACCCTCTCACCTGTTCAGACTC-ATTTCCTAAG  49
      ||||||||| |||||||||||| ||||||||||||| || ||||||||||
seq2  GTCAGGTTC-CTGGCGCACCCTTTCACCTGTTCAGATTCAATTTCCTAAG  49

seq1  TTCGGCGGGTCTCGGACCAAGATGGCGACCGCTGCTGCTG-TCG-AATAC  97
       |||||||||||| || |||||| |||| ||||||||||| ||| |||||
seq2  GTCGGCGGGTCTC-GAACAAGAT-GCGA-CGCTGCTGCTGTTCGAAATAC  96

seq1  GCCTTTTCATATG-AGCTCAAGTTCTTTACCAT-ACTTTC-TATCAC-AC  143
      ||||||  ||||| ||||||||| ||| ||||| |||||| |||||| ||
seq2  GCCTTTCAATATGAAGCTCAAGTCCTTAACCATAACTTTCTTATCACAAC  146

seq1  AAGTAAATCGGTTGTGACTTTTTAATTACTCTTTGATCTTGTGCAAGTTT  193
      ||||||||||| ||||   |||||| ||||||||||||||||||||||||
seq2  AAGTAAATCGG-TGTGGACTTTTAAATACTCTTTGATCTTGTGCAAGTTT  195

seq1  CCT-CACATCTCTTAGACTACAATATTAACTTTTACAAGATGACCTTTGG  242
      ||| |||||||||||||||||||||| ||| |||||||||||||||||||
seq2  CCTCCACATCTCTTAGACTACAATATAAAC-TTTACAAGATGACCTTTGG  244

seq1  GAAGTTCACATTGGTGGAGCTGTGGCCTTGCTCTGGGATTTAGATATTTT  292
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GAAGTTCACATTGGTGGAGCTGTGCCCTTGCTCTGGGATTTAGATATTTT  294

seq1  TCACTTGACAATGAAAGTCATAGGCCTGAAGGGAGTGCTAATATTGTATC  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTGACAATGAAAGTCATAGGCCTGAAGGGAGTGCTAATATTGTATC  344

seq1  CTTTCACTTGAGGAGTTGCTTCCCTCCCCCTTGTGTGTATCAGGGTCATC  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCACTTGAGGAGTTGCTTCCCTCCCCCTTGTGTGTATCAGGGTCATC  394

seq1  AATCAGGGCAGTTCATATTATTAGGCCAGTGGAAAGCTCTGATCCATCAA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGGGCAGTTCATATTATTAGGCCAGTGGAAAGCTCTGATCCATCAA  444

seq1  GCCCCATTTCAGTGCTGTTCTGCCTTCAGGAGCACTCTTCCATGGATTAC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCATTTCAGTGCTGTTCTGCCTTCAGGAGCACTCTTCCATGGATTAC  494

seq1  TGCCTACTCTCATTTTCTTAGATGAATTAGCTCTTCCCAGCATTGATGCT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTACTCTCATTTTCTTAGATGAATTAGCTCTTCCCAGCATTGATGCT  544

seq1  CACAAAATTCCTGACCCTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAATTCCTGACCCTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGT  594

seq1  GTGTGTGTGTGTGTGTGGTGGTTGGAGTGAACATTGCTTACTTTACTTTC  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGGTGGTTGGAGTGAACATTGCTTACTTTACTTTC  644

seq1  CTCTTGGGAGGAAAAGCCTTTAAGAAGTTTGAGAATTGGGGCTGGTTCCA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGGGAGGAAAAGCCTTTAAGAAGTTTGAGAATTGGGGCTGGTTCCA  694

seq1  AATAGACACTTTCACAGTTAGGTCACTTCTAATGAAATGATGAAATATTT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGACACTTTCACAGTTAGGTCACTTCTAATGAAATGATGAAATATTT  744

seq1  TCCAGACATTTTGAGTACTTCCATCCATTTAAACATTGCAGGCTTCAAGG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGACATTTTGAGTACTTCCATCCATTTAAACATTGCAGGCTTCAAGG  794

seq1  GGGGTGCTTACCTCCTACATAGGAGTCCTTTGCAGAGTCCCAGACATTCA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGCTTACCTCCTACATAGGAGTCCTTTGCAGAGTCCCAGACATTCA  844

seq1  ATAAGTATGGGATATGTCCAGGCATACAAAGCAGCTCTGTAAGAGAGAAG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTATGGGATATGTCCAGGCATACAAAGCAGCTCTGTAAGAGAGAAG  894

seq1  TAGATGTCTTTGATGAAACTCTCCCTTCTATTGCCTTTTATGTAGTTGGC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGTCTTTGATGAAACTCTCCCTTCTATTGCCTTTTATGTAGTTGGC  944

seq1  AGCACCTGTGTTTCTGTGTATCCATACCAAAGAGTTTGGCTTTGCCTTAC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCTGTGTTTCTGTGTATCCATACCAAAGAGTTTGGCTTTGCCTTAC  994

seq1  TATCCCCAATTCTCTCAGCTCCCCCACAAATAATTGAGTTTCATATCCAG  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCCAATTCTCTCAGCTCCCCCACAAATAATTGAGTTTCATATCCAG  1044

seq1  TCCACCCTTGCTTCCATTTTTGTATAGTACACTCAGCTTCTTCTCATTGT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCCTTGCTTCCATTTTTGTATAGTACACTCAGCTTCTTCTCATTGT  1094

seq1  TAACACAGCCACAGTCTGGATTGTTACATGAGTCTTGAATTC  1134
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACAGCCACAGTCTGGATTGTTACATGAGTCTTGAATTC  1136