BAC Information

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BAC

Clone NameB6Ng01-342A09
Chromosome4 (Build37)
Map Location 38,262,385 - 38,263,306
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC277771, LOC100039448
Downstream geneLOC665520, LOC100039487
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-342A09.bB6Ng01-342A09.g
ACCGA125232GA125233
length9961,236
definitionB6Ng01-342A09.b B6Ng01-342A09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatttttagatattttttctttcctaggtgttgacctatattca
tttatagtttatataagtgcattaatctctacatttttaaaagtgatgaa
ccatgttcaattttgtattttgatgtttcccttaatactacctaacaaat
gctaaatgatacagctaaaataaaaaatatataatactatacttataaaa
gcattataatcttaacaaatttaagctacagaggtctgtcatttatgttt
tactgtggataaaaaaagggttggatattttgatttgggcagacaattat
tgtgtgccttattattgggaagatcccgatgaactttagataatccattg
ctatgcttttaaaatcatttagataaaataataattattatgttgctcaa
attttttatccctgtttgcaatctttttttttccattttttattaggtat
ttagctcatttacatttccaatgctataccaaaagacccccttacccacc
cacccccactcccctacccacccactccccccctttggccctggcgttcc
cctgtaccggggcacacaaagtctgcgtgtccaatgggcctctctttcca
gtgatggccgactaggccatcttttgatacatatgcagctagagtcaaga
gctcaggggtactggttagttcataatgttgttccacctatagggttgaa
gatccctttagctccttgggtactttctctagctcctccattgggagccc
tgtgatccatccattagctgactgtgagcatccacttctgtgtttgctag
gccccggcatagtctcacaagagacagctacatctgggtcctttcagtaa
aatcttgctagtgtatgcaatagtgtcagcatttggaagctgatatgggg
tggatccctggatattggcagtctctacatggtccgtcctttcatctcag
ctccatactttgtttctgtacctccttccatgggtgtttgttccca

gaattctctaatacactcaagaaagattggcagggttattcacagtcttt
tatgtttccatatggtatttatttattttagtgaagaatgtaatagggat
ttcataagggttacattaaaatggcttttacttttagtaatagaaacatt
gtcaatatattaactcatcccaggtacagcattttgtttaatatcttttt
ctgcaatatcaaaaaattgttagtatataacttttatataactttcattt
tcctagttagcttcatttctaaacaatttataatttttggataactcatt
atatttcccattatcactttcttattacgtacatttatgaaagctattga
ttttatacattgatttttatatccagccgcatcattgtatatatttactt
aatctaagagttttctggtagagtctgtagggatttttaagatcagcaat
atgacatctgagaattaaagaaatttacattattcttttactattttggt
attttttctactgtcctatttctttatgtatgtctttgaacactgtattg
aatagtaggagagtggtaattcttatctcattctgttatagcaaatgcac
ttccagaaaatagaaaggaacactaacagaatcatcttatgaagtaaccc
tcatattgataacaaagtagacacaaatcaaacaaaatattatgagccaa
tcactttgatatacgtgataaactctcaataaaccccataaactgaatga
gtacacaaaccaaataaccacacattgtgtcttactgaactttattatgg
ggtgaaggctttggctacatatgcaaagtcatcaattttctagactatat
gaacttaaggatataatttcacatgaccattttgataagggcagaaagaa
tttgatacatttcaatatgtatttatgataaaataaagacaccagttaat
acctgaacagatctaaagatattacaaaaacataatgttatgttttacac
cttacagcatgctatataaaatgtgaaaatctcccagttttgtgataatg
caacaacccgaaggacgaaacagtctgttccaccacatattttgtagaat
aaatagctatcacctcaaattatcatatgtaataatcaatattttatttt
gatttctgattgatgccttttaagaaaggatacttgagttttattttgga
aacatttgctataatgtgtttggtgtagttgagaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_38262385_38263306
seq2: B6Ng01-342A09.b_46_967

seq1  GAATTCCATTTTTAGATATTTTTTCTTTCCTAGGTGTTGACCTATATTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTTTTAGATATTTTTTCTTTCCTAGGTGTTGACCTATATTCA  50

seq1  TTTATAGTTTATATAAGTGCATTAATCTCTACATTTTTAAAAGTGATGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAGTTTATATAAGTGCATTAATCTCTACATTTTTAAAAGTGATGAA  100

seq1  CCATGTTCAATTTTGTATTTTGATGTTTCCCTTAATACTACCTAACAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTTCAATTTTGTATTTTGATGTTTCCCTTAATACTACCTAACAAAT  150

seq1  GCTAAATGATACAGCTAAAATAAAAAATATATAATACTATACTTATAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAATGATACAGCTAAAATAAAAAATATATAATACTATACTTATAAAA  200

seq1  GCATTATAATCTTAACAAATTTAAGCTACAGAGGTCTGTCATTTATGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTATAATCTTAACAAATTTAAGCTACAGAGGTCTGTCATTTATGTTT  250

seq1  TACTGTGGATAAAAAAAGGGTTGGATATTTTGATTTGGGCAGACAATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTGGATAAAAAAAGGGTTGGATATTTTGATTTGGGCAGACAATTAT  300

seq1  TGTGTGCCTTATTATTGGGAAGATCCCGATGAACTTTAGATAATCCATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGCCTTATTATTGGGAAGATCCCGATGAACTTTAGATAATCCATTG  350

seq1  CTATGCTTTTAAAATCATTTAGATAAAATAATAATTATTATGTTGCTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCTTTTAAAATCATTTAGATAAAATAATAATTATTATGTTGCTCAA  400

seq1  ATTTTTTATCCCTGTTTGCAATCTTTTTTTTTCCATTTTTTATTAGGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTATCCCTGTTTGCAATCTTTTTTTTTCCATTTTTTATTAGGTAT  450

seq1  TTAGCTCATTTACATTTCCAATGCTATACCAAAAGACCCCCTTACCCACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTCATTTACATTTCCAATGCTATACCAAAAGACCCCCTTACCCACC  500

seq1  CACCCCCACTCCCCTACCCACCCACTCCCCCCCTTTGGCCCTGGCGTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCCACTCCCCTACCCACCCACTCCCCCCCTTTGGCCCTGGCGTTCC  550

seq1  CCTGTACCGGGGCACACAAAGTCTGCGTGTCCAATGGGCCTCTCTTTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTACCGGGGCACACAAAGTCTGCGTGTCCAATGGGCCTCTCTTTCCA  600

seq1  GTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGA  650

seq1  GCTCAGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTTGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTTGAA  700

seq1  GATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGAGCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGAGCCC  750

seq1  TGTGATCCATCCATTAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATCCATCCATTAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAG  800

seq1  GCCCCGGCATAGTCTCACAAGAGACAGCTACATCTGGGTCCTTTCAGTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCGGCATAGTCTCACAAGAGACAGCTACATCTGGGTCCTTTCAGTAA  850

seq1  AATCTTGCTAGTGTATGCAATAGTGTCAGCATTTGGAAGCTGATTATGGG  900
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AATCTTGCTAGTGTATGCAATAGTGTCAGCATTTGGAAGCTGA-TATGGG  899

seq1  GTGGATCCCTGGATA-TGGCAGT  922
      ||||||||||||||| |||||||
seq2  GTGGATCCCTGGATATTGGCAGT  922


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