BAC Information

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BAC

Clone NameB6Ng01-342L17
Chromosome4 (Build37)
Map Location 113,717,644 - 113,718,764
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC230622, LOC100040607, LOC242627
Downstream geneLOC100040625, A630098G03Rik, LOC666048, Foxd2, LOC100040736, Foxe3, Cmpk, Stil
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-342L17.bB6Ng01-342L17.g
ACCGA125722GA125723
length1,104654
definitionB6Ng01-342L17.b B6Ng01-342L17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaagctcacagtgggcttcaaggattttctaggaccttggaaca
ctggtggaggtttacctatgtcaaaaataaatctttaaaggtacttataa
taaaacaatactgaaagagggcatacaccagactaacacggggacagggt
ttgagtatatgggctatgggaatgccaaggttcaaggagacatagtttcc
ttgaatctctttgcctcatgagtgcttccaggcctcagcctgtcaagcag
atatcgatggagtggaaatagcatattggtcacccctgaaccagcataac
tccatatactctaagtgtgtcatagagacacctaacagttgatgtcaggc
tcaccttttaatctactcacaaagaatgcagtgcaagtagtcaccatcag
attatctctaccaaaatataaaaataaaaataaatctgaaactatcacga
ctttgctgccataaactgcttagaagaacatatcaaatcctacccacaag
gactagataacatacatattgaactcattatatttcctttaattttccct
tatttttaaatccagtgctagctcaatttttttaatctttaaaatagatt
ctattgaagtaggaagccccaaaaacctctcttgattttctacatatttg
aaatagaaaaattagagttcttcactccatcccttaagcctctaccagaa
tagaaagccatcaccatataattgtttttcttctgccatatcccctggaa
tttaatacaccaaattactcatggatcagaatgatgggtttcacaaaaac
ctaaaatacctcctctttttcatcctcataaattttagcgttatttaaaa
ttttacaatttttgggtcattaagtaattgaaaaatgacatttgggacct
taaatccatgattatttcatgtttgcaggtcacttttgctcatcttgtaa
ctattagtattcacttgagctttcattctggaaccacataataaaatcta
tttaactgagttctgggataggatctagctatgcatgcagaactttatga
gtcatgtacatagcttgataatatactttagtcttgtacagaagaattca
ctaa

gaattccaagttttgcaggcaaatgcatgtatctagaaaatatgatcctg
agtgaggtaattcagacccaaaaagacatgcatggtatatactcactaat
aagtggatattagccaaaaaagtacagaatattgaggacacaattcacag
aactcaaaaatgtcaacaagttgaagggcccaagtgaggatatctcagtt
ccacttgtgactgagaagaaagcaatcacagaggggaggagggagggacc
tggaagggaaaggggacagagggggaacatgataatgggtggggtggaaa
ggactgaagccctgaggactagcagaaaacatgtaaacaggcaacctcgg
aaagtaggaggttgggggccacctttagaatgtaccagagacctgggaga
atctcacgattcaaagggaggaaccttaggtgaaatgtcctacagtgggg
agagggaacttgtagagccttccttcagcaaaaagacaggacatcaagtg
aaggatggggttgccatccctcagataaaaactctgacccagaattgttc
ctctctgaaagaaatgcaggataaaaaatgaagcgactgaggaaaagaag
gtccagcgacaggcccaagtatgatccagctcaagggggagaccccagtc
ctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_113717644_113718764
seq2: B6Ng01-342L17.b_46_1149

seq1  GAATTCCAAGCTCACAGTGGGCTTCAAGGATTTTCTAGGACCTTGGAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGCTCACAGTGGGCTTCAAGGATTTTCTAGGACCTTGGAACA  50

seq1  CTGGTGGAGGTTTACCTATGTCAAAAATAAATCTTTAAAGGTACTTATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGGAGGTTTACCTATGTCAAAAATAAATCTTTAAAGGTACTTATAA  100

seq1  TAAAACAATACTGAAAGAGGGCATACACCAGACTAACACGGGGACAGGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAATACTGAAAGAGGGCATACACCAGACTAACACGGGGACAGGGT  150

seq1  TTGAGTATATGGGCTATGGGAATGCCAAGGTTCAAGGAGACATAGTTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTATATGGGCTATGGGAATGCCAAGGTTCAAGGAGACATAGTTTCC  200

seq1  TTGAATCTCTTTGCCTCATGAGTGCTTCCAGGCCTCAGCCTGTCAAGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATCTCTTTGCCTCATGAGTGCTTCCAGGCCTCAGCCTGTCAAGCAG  250

seq1  ATATCGATGGAGTGGAAATAGCATATTGGTCACCCCTGAACCAGCATAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCGATGGAGTGGAAATAGCATATTGGTCACCCCTGAACCAGCATAAC  300

seq1  TCCATATACTCTAAGTGTGTCATAGAGACACCTAACAGTTGATGTCAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATATACTCTAAGTGTGTCATAGAGACACCTAACAGTTGATGTCAGGC  350

seq1  TCACCTTTTAATCTACTCACAAAGAATGCAGTGCAAGTAGTCACCATCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTTTTAATCTACTCACAAAGAATGCAGTGCAAGTAGTCACCATCAG  400

seq1  ATTATCTCTACCAAAATATAAAAATAAAAATAAATCTGAAACTATCACGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTCTACCAAAATATAAAAATAAAAATAAATCTGAAACTATCACGA  450

seq1  CTTTGCTGCCATAAACTGCTTAGAAGAACATATCAAATCCTACCCACAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCTGCCATAAACTGCTTAGAAGAACATATCAAATCCTACCCACAAG  500

seq1  GACTAGATAACATACATATTGAACTCATTATATTTCCTTTAATTTTCCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGATAACATACATATTGAACTCATTATATTTCCTTTAATTTTCCCT  550

seq1  TATTTTTAAATCCAGTGCTAGCTCAATTTTTTTAATCTTTAAAATAGATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTAAATCCAGTGCTAGCTCAATTTTTTTAATCTTTAAAATAGATT  600

seq1  CTATTGAAGTAGGAAGCCCCAAAAACCTCTCTTGATTTTCTACATATTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGAAGTAGGAAGCCCCAAAAACCTCTCTTGATTTTCTACATATTTG  650

seq1  AAATAGAAAAATTAGAGTTCTTCACTCCATCCCTTAAGCCTCTACCAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGAAAAATTAGAGTTCTTCACTCCATCCCTTAAGCCTCTACCAGAA  700

seq1  TAGAAAGCCATCACCATATAATTGTTTTTCTTCTGCCATATCCCCTGGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGCCATCACCATATAATTGTTTTTCTTCTGCCATATCCCCTGGAA  750

seq1  TTTAATACACCAAATTACTCATGGATCAGAATGATGGGTTTCACAAAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATACACCAAATTACTCATGGATCAGAATGATGGGTTTCACAAAAAC  800

seq1  CTAAAATACCTCCTCTTTTTCATCCTCATAAATTTTAGCGTTATTTAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAATACCTCCTCTTTTTCATCCTCATAAATTTTAGCGTTATTTAAAA  850

seq1  TTTTACAATTTTTGGGTCATTAAGTAATTGAAAAATGACATTTTGGACCT  900
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTTTACAATTTTTGGGTCATTAAGTAATTGAAAAATGACATTTGGGACCT  900

seq1  TAAATCCATGATTATTTCATGTTTGCAGGTCACTTTTGCTCATCTTGTAA  950
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TAAATCCATGATTATTTCATGTTTGCAGGTCACTTTTGCTCATCTTGT-A  949

seq1  ACTATTAGGTATTCACTTTGAGCTTTCAATTCTGGAAACCACATAATAAA  1000
      ||||||| |||||||| |||||||||| ||||||| ||||||||||||||
seq2  ACTATTA-GTATTCAC-TTGAGCTTTC-ATTCTGG-AACCACATAATAAA  995

seq1  ATCTAATTTAACTGAAGTTTCTGGGAATTAGGATCTAAGCTATGCATGCA  1050
      |||| ||||||||||   ||||||||  |||||||| |||||||||||||
seq2  ATCT-ATTTAACTGA--GTTCTGGGA--TAGGATCT-AGCTATGCATGCA  1039

seq1  GAAACTTTATTGAGTTCATGTACATAGCTTGAT-ATATACTTTAGTTCTT  1099
      | ||||||| |||| |||||||||||||||||| ||||||||||| ||||
seq2  G-AACTTTA-TGAG-TCATGTACATAGCTTGATAATATACTTTAG-TCTT  1085

seq1  GTACCAGAAGAAATTTCACTAA  1121
      ||| ||||||||  ||||||||
seq2  GTA-CAGAAGAA--TTCACTAA  1104


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