BAC Information

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BAC

Clone NameB6Ng01-343G01
Chromosome4 (Build37)
Map Location 38,235,331 - 38,236,512
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC277771, LOC100039448
Downstream geneLOC665520, LOC100039487
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-343G01.bB6Ng01-343G01.g
ACCGA126171GA126172
length1,2421,187
definitionB6Ng01-343G01.b B6Ng01-343G01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctaatacactcaagaaagattggcagggttattcacagtcttt
tatgtttccatatggtatttatttattttagtgaagaatgtaatagggat
ttcataagggttacattaaaatggcttttacttttagtaatagaaacatt
gtcaatatattaactcatcccaggtacagcattttgtttaatatcttttt
ctgcaatatcaaaaaattgttagtatataacttttatataactttcattt
tcctagttagcttcatttctaaacaatttataatttttggataactcatt
atatttcccattatcactttcttattacgtacatttatgaaagctattga
ttttatacattgatttttatatccagccgcatcattgtatatatttactt
aatctaagagttttctggtagagtctgtagggatttttaagatcagcaat
atgacatctgagaattaaagaaatttacattattcttttactattttggt
attttttctactgtcctatttctttatgtatgtctttgaacactgtattg
aatagtaggagagtggtaattcttatctcattctgttatagcaaatgcac
ttccagaaaatagaaaggaacactaacagaatcatcttatgaagtaaccc
tcatattgataacaaagtagacacaaatcaaacaaaatattatgagccaa
tcactttgatatacgtgataaactctcaataaaccccataaactgaatga
gtacacaaaccaaataaccacacattgtgtcttactgaactttattatgg
ggtgaaggctttggctacatatgcaaagtcatcaattttctagactatat
gaacttaaggatataattcacatgaccattttgataagggcagaaagaat
ttgatacatttcaatatgtatttatgataaaataaagacaccagttaata
acctgaacagatctaaagatattacaaaacaataatgtttatgtttacaa
ccttacaagcaatgctatataaaatgtggaaatctcccagttttgtgata
atgcaaacaaccacgaagacagaaaacagtctgttcaacacatatttgta
gaataaatagctaatcccctcaaacattattctaatgtaataatccaatt
ttttatttcattccgtatgtatagcgccttcagaaggtactaccttgaag
tttattggaaacattagtaaactggctgtctagtacgactcg

gaattccagtaggtgactaggagtggaaggtagacatttatcccaccaca
tgctgagatgctgttagaatgtaatgactgctcagagaggcaaagccagg
aatagagtaattcagcaatacaccatgacatctatgtcccctacattaat
gcacatacatgtaccaatacacctgctcccacatatacatgtaacacaca
tcactgcaaaaaaaaaaaaaactcacctataatatgttaataaacatgct
ctgaatacctaagtcttaattacatatcaatacaaagtttgtagtttctc
cactgaatttcaaagaaccttggcttgtatttgagctaactgactgtatt
aagcagatttacagatcctttaaactggtgactggtgaggttttggaatc
gccacgcaaaccactcagacaggaatctcagtcaaacagggctggtttat
tgaatgcataccccaagacagattgataacagacacagtctggcttagga
gctgaactatgatccccagcagagttatatagagctttgaaaactgaaat
ccataatcatctgttcaaggttattccaccaatcacgatgtagggaaagg
gatttacttaagtccgcatctttattgtacatttaacctggtttatagat
acatttatataggtagggtattatctttgtcaggagacttgtcttgccta
acattcatgtactaatttggcaacaggtatatacatgtctctttctgtct
agtaggatgttaattcccagggaggtcttttgaactcaactttaaccctt
cctcaaaatgaaagctttacaccaaaaggcttcttatattggttcagttg
tctctctcatgttggggtccatcctaggggtgccttataaaggcagtaag
gcagagtagttcatacataggtgtagaaagtgcttctggatggttgggtt
ggggaacaagcttatgtagcctactatatagaacaattctaactgagctc
ttattgtaatggtgtccaagaaccaccaaagcacagactgtagtagatat
gtactcaactcgggtatgaaaacattcatagttaaagcaacacgagaaaa
attatgctgttgacagcagcaggttaccctaggcctacaagagaattaat
actgtatacacatagctttaatcaattggaaatatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_38235331_38236512
seq2: B6Ng01-343G01.g_66_1252

seq1  GAATTCCAGTAGGTGACTAGGAGTGGAAGGTAGACATTTATCCCACCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTAGGTGACTAGGAGTGGAAGGTAGACATTTATCCCACCACA  50

seq1  TGCTGAGATGCTGTTAGAATGTAATGACTGCTCAGAGAGGCAAAGCCAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAGATGCTGTTAGAATGTAATGACTGCTCAGAGAGGCAAAGCCAGG  100

seq1  AATAGAGTAATTCAGCAATACACCATGACATCTATGTCCCCTACATTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAGTAATTCAGCAATACACCATGACATCTATGTCCCCTACATTAAT  150

seq1  GCACATACATGTACCAATACACCTGCTCCCACATATACATGTAACACACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATACATGTACCAATACACCTGCTCCCACATATACATGTAACACACA  200

seq1  TCACTGCAAAAAAAAAAAAAACTCACCTATAATATGTTAATAAACATGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGCAAAAAAAAAAAAAACTCACCTATAATATGTTAATAAACATGCT  250

seq1  CTGAATACCTAAGTCTTAATTACATATCAATACAAAGTTTGTAGTTTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATACCTAAGTCTTAATTACATATCAATACAAAGTTTGTAGTTTCTC  300

seq1  CACTGAATTTCAAAGAACCTTGGCTTGTATTTGAGCTAACTGACTGTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAATTTCAAAGAACCTTGGCTTGTATTTGAGCTAACTGACTGTATT  350

seq1  AAGCAGATTTACAGATCCTTTAAACTGGTGACTGGTGAGGTTTTGGAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGATTTACAGATCCTTTAAACTGGTGACTGGTGAGGTTTTGGAATC  400

seq1  GCCACGCAAACCACTCAGACAGGAATCTCAGTCAAACAGGGCTGGTTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACGCAAACCACTCAGACAGGAATCTCAGTCAAACAGGGCTGGTTTAT  450

seq1  TGAATGCATACCCCAAGACAGATTGATAACAGACACAGTCTGGCTTAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGCATACCCCAAGACAGATTGATAACAGACACAGTCTGGCTTAGGA  500

seq1  GCTGAACTATGATCCCCAGCAGAGTTATATAGAGCTTTGAAAACTGAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAACTATGATCCCCAGCAGAGTTATATAGAGCTTTGAAAACTGAAAT  550

seq1  CCATAATCATCTGTTCAAGGTTATTCCACCAATCACGATGTAGGGAAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAATCATCTGTTCAAGGTTATTCCACCAATCACGATGTAGGGAAAGG  600

seq1  GATTTACTTAAGTCCGCATCTTTATTGTACATTTAACCTGGTTTATAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTACTTAAGTCCGCATCTTTATTGTACATTTAACCTGGTTTATAGAT  650

seq1  ACATTTATATAGGTAGGGTATTATCTTTGTCAGGAGACTTGTCTTGCCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTATATAGGTAGGGTATTATCTTTGTCAGGAGACTTGTCTTGCCTA  700

seq1  ACATTCATGTACTAATTTGGCAACAGGTATATACATGTCTCTTTCTGTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCATGTACTAATTTGGCAACAGGTATATACATGTCTCTTTCTGTCT  750

seq1  AGTAGGATGTTAATTCCCAGGGAGGTCTTTTGAACTCAACTTTAACCCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGATGTTAATTCCCAGGGAGGTCTTTTGAACTCAACTTTAACCCTT  800

seq1  CCTCAAAATGAAAGCTTTACACCAAAAGGCTTCTTATATTGGTTCAGTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAAATGAAAGCTTTACACCAAAAGGCTTCTTATATTGGTTCAGTTG  850

seq1  TCTCTCTCATGTTGGGGTCCATCCTAGGGGTGCCTTATAAAGGCAGTAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCATGTTGGGGTCCATCCTAGGGGTGCCTTATAAAGGCAGTAAG  900

seq1  GCAGAGTAGTTCATACATAGGTGTAGAAAGTGCTTCTGGATGGTT-GGTT  949
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GCAGAGTAGTTCATACATAGGTGTAGAAAGTGCTTCTGGATGGTTGGGTT  950

seq1  GGGGAACAAGCTTATTGTAGCCTACTATATAGAACAATTCTAACTGAGCT  999
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GGGGAACAAGCTTA-TGTAGCCTACTATATAGAACAATTCTAACTGAGCT  999

seq1  C-TATTGTAATTGGTGTCCAAGAA-CACCAAAGCACAGACTGTAGTAGAA  1047
      | |||||||| ||||||||||||| ||||||||||||||||||||||| |
seq2  CTTATTGTAA-TGGTGTCCAAGAACCACCAAAGCACAGACTGTAGTAG-A  1047

seq1  TATGTACTCAACTCGGGTATGAAAACATTTCATAGTAAAAGC-ACACGAG  1096
      ||||||||||||||||||||||||||| |||||||| ||||| |||||||
seq2  TATGTACTCAACTCGGGTATGAAAACA-TTCATAGTTAAAGCAACACGAG  1096

seq1  AAAATTTATGGCTGGTCTGACAGGCAGCA-GTTA-CCTAGGCCTTACCAG  1144
      |||| |||| ||||   ||||| |||||| |||| |||||||| ||| ||
seq2  AAAAATTAT-GCTG--TTGACA-GCAGCAGGTTACCCTAGGCC-TACAAG  1141

seq1  AGA--TTATACTGTAT-CAC-TAGCTTT-ATCAATGG---ATATGT  1182
      |||  | ||||||||| ||| ||||||| |||||| |   ||||||
seq2  AGAATTAATACTGTATACACATAGCTTTAATCAATTGGAAATATGT  1187


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