BAC Information

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BAC

Clone NameB6Ng01-343N08
Chromosome4 (Build37)
Map Location 37,679,411 - 37,680,481
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042132, LOC545600, LOC621458
Downstream geneLOC277771, LOC100039448, LOC665520
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-343N08.bB6Ng01-343N08.g
ACCGA126503GA126504
length1,115887
definitionB6Ng01-343N08.b B6Ng01-343N08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccataaaaatatcaacagagtcaatgaacctggacccttggggac
tcacagagactaaaccatcaatcaagtagcatacatggactggagctaaa
tatggtctcctgaacatatttagcagctatgcagcagctcagtctttatg
taggtcctgaacaactagagtggggacgatccctaatgctcttgcctgtc
tgtgggataagttcttctaattgggctgaccttgtctgtcctcagtgtgc
aattatgtgcctagccctatgtgcaagggagatggatatccaggaggtcc
tccaaaatttagcagagaagaggaagtgagatgggggatgctgtgggagg
gctaatttgggacagtgatatggacataaattgaaggaaggaaggaagga
aggaaggaagaaagaaagaaagaaagaaagaaagaaagaaagggaaagaa
aagaaaagaaaagaaaagaaaagaaaagaaaagaaaagaaaagaaaagaa
aagaaaagaaaagaaaagaaaagaaagctccctccaggactggtgcatca
ctctgcagatttcgactactgctcaagcagcatgttctctgccatgctga
tcaggaagtagctttggaaactattcttctcatatgtaaaaaataaaata
aataaataaaaccttaccccaacctcttgcatgtaaagtctacttaaaat
acatagtaaactatgtaaactataccatgtctgctgaactttattttcag
acccactgcgtgcatcctgaagagaccagagacaaaccagggtaggacat
acctcccagctccattcccttgactattaagacccctttaaggcacaaaa
cagctgtaaattgctacaggtccctttgtgatccattttcttacccacca
ctctgtcagaatttctcttcagggcatactggcaccagggaaccacaacc
cagtgttgatattagttgaccgcagaaggccaggttttgtaccctcaaag
gcaatggcggtccacaaaccatggaggtttaataccctgttgcaccctaa
agactttgcctagtcaaaatatccagttcacctcaggccaggatgcagat
aggaaacctatccac

gaattccacagaaagaacagtacattcaactcacctagacccttgagggt
ctcagagacttaacaaccaaacaatgagtatacataggctgcacctatgt
agcagatgtacagcttgatcttcatgtgggtctcaaataaatggagtagg
ggttatcccaaaagctgttgttggtacatgttctttgttcttctagttga
gctgccatgtctggccttagtgggagaggatgcacctagcctatcagaga
cttgatgtaccagggtagtgggataacaagcagccccccacttactcaga
gagaatggggggggcagatggggtgaaagattttgggagtggacaactgg
gagtggggcagtgtgcgggatgtaatatctatatctacatctacatctac
atctacatatacatctatatatacatctatatataaaatatatataatat
attattttatttatatattatttatatattacataatatatatataattc
ataagataaatatatatttatattttatatatgcacatattcatatattg
cttatatatgaatatgtatatatacatacatatatatatatatataaata
ttgactattctctttacaattatcgtgcctgttttcatctaatagtatag
aggctcttcacataaagtatctcaatcttttctttgtccagtgagggcat
agctttctaaatgtcattgagcaccaatggcctgttttagaccattacag
gtattgcatcttgttgcttttcttctgtcatctggcatatttactagcct
ttgtacccatcaaaagttaagtaattatgatggactttgaattttaccgg
tgtaattctaaatttgacatgcataatctcttttcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_37679411_37680481
seq2: B6Ng01-343N08.b_72_1160

seq1  CAATGAACCTGGACCCTTGGGGACTCACAGAGACTAAACCATCAATCAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAACCTGGACCCTTGGGGACTCACAGAGACTAAACCATCAATCAAG  50

seq1  TAGCATACATGGACTGGAGCTAAATATGGTCTCCTGAACATATTTAGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATACATGGACTGGAGCTAAATATGGTCTCCTGAACATATTTAGCAG  100

seq1  CTATGCAGCAGCTCAGTCTTTATGTAGGTCCTGAACAACTAGAGTGGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCAGCAGCTCAGTCTTTATGTAGGTCCTGAACAACTAGAGTGGGGA  150

seq1  CGATCCCTAATGCTCTTGCCTGTCTGTGGGATAAGTTCTTCTAATTGGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATCCCTAATGCTCTTGCCTGTCTGTGGGATAAGTTCTTCTAATTGGGC  200

seq1  TGACCTTGTCTGTCCTCAGTGTGCAATTATGTGCCTAGCCCTATGTGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTTGTCTGTCCTCAGTGTGCAATTATGTGCCTAGCCCTATGTGCAA  250

seq1  GGGAGATGGATATCCAGGAGGTCCTCCAAAATTTAGCAGAGAAGAGGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGATGGATATCCAGGAGGTCCTCCAAAATTTAGCAGAGAAGAGGAAG  300

seq1  TGAGATGGGGGATGCTGTGGGAGGGCTAATTTGGGACAGTGATATGGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATGGGGGATGCTGTGGGAGGGCTAATTTGGGACAGTGATATGGACA  350

seq1  TAAATTGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAG  400

seq1  AAAGAAAGAAAGAAAGGGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGAAAGAAAGGGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAA  450

seq1  AGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAA  500

seq1  GCTCCCTCCAGGACTGGTGCATCACTCTGCAGATTTCGACTACTGCTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCTCCAGGACTGGTGCATCACTCTGCAGATTTCGACTACTGCTCAA  550

seq1  GCAGCATGTTCTCTGCCATGCTGATCAGGAAGTAGCTTTGGAAACTATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCATGTTCTCTGCCATGCTGATCAGGAAGTAGCTTTGGAAACTATTC  600

seq1  TTCTCATATGTAAAAAATAAAATAAATAAATAAAACCTTACCCCAACCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCATATGTAAAAAATAAAATAAATAAATAAAACCTTACCCCAACCTC  650

seq1  TTGCATGTAAAGTCTACTTAAAATACATAGTAAACTATGTAAACTATACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATGTAAAGTCTACTTAAAATACATAGTAAACTATGTAAACTATACC  700

seq1  ATGTCTGCTGAACTTTATTTTCAGACCCACTGCGTGCATCCTGAAGAGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGCTGAACTTTATTTTCAGACCCACTGCGTGCATCCTGAAGAGAC  750

seq1  CAGAGAC-AACCA-GGTAGGACATACCT-CCAGCTCCATTCCCTTGACTA  797
      ||||||| ||||| |||||||||||||| |||||||||||||||||||||
seq2  CAGAGACAAACCAGGGTAGGACATACCTCCCAGCTCCATTCCCTTGACTA  800

seq1  TTAAGACCCC-TTAAGGCAC-AAACAGCTGTAAATTGCTACAGGTCCC-T  844
      |||||||||| ||||||||| ||||||||||||||||||||||||||| |
seq2  TTAAGACCCCTTTAAGGCACAAAACAGCTGTAAATTGCTACAGGTCCCTT  850

seq1  TGTGATCCATTTTCTTACCCACCACTCTGTCAGAA-TTCTC-TCAGGGCA  892
      ||||||||||||||||||||||||||||||||||| ||||| ||||||||
seq2  TGTGATCCATTTTCTTACCCACCACTCTGTCAGAATTTCTCTTCAGGGCA  900

seq1  TACTGGCACCAGGG-ACCACAA-CCAGTGTTGATATTAG-TGACCGCAG-  938
      |||||||||||||| ||||||| |||||||||||||||| ||||||||| 
seq2  TACTGGCACCAGGGAACCACAACCCAGTGTTGATATTAGTTGACCGCAGA  950

seq1  AGGCAAGG-TTTGTA-CCTCAAAGGCAAT-GCGG-CCACAAACCAT-GAG  983
      |||| ||| |||||| ||||||||||||| |||| ||||||||||| |||
seq2  AGGCCAGGTTTTGTACCCTCAAAGGCAATGGCGGTCCACAAACCATGGAG  1000

seq1  GTTAAATACCCTG-TGGAACCTAAAGACTT--GCTAGTCAAAATAATCCC  1030
      ||| ||||||||| || | |||||||||||   ||||||||||||   ||
seq2  GTTTAATACCCTGTTGCACCCTAAAGACTTTGCCTAGTCAAAATA--TCC  1048

seq1  AGTTCA-CTCAGGCCAGAATGCAGATAGGAAACAAAATCCAC  1071
      |||||| |||||||||| |||||||||||||||   ||||||
seq2  AGTTCACCTCAGGCCAGGATGCAGATAGGAAAC-CTATCCAC  1089


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