BAC Information

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BAC

Clone NameB6Ng01-343P16
Chromosome4 (Build37)
Map Location 74,421,841 - 74,541,130
singlet/doubletdoublet
Overlap genenone
Upstream geneRasef, LOC667768, LOC545637, LOC623272, OTTMUSG00000014862, OTTMUSG00000004010, 2310002L09Rik, Frmd3, LOC100039774, Jmjd2c, LOC100040258, LOC100039814
Downstream geneLOC636847, 3110001D03Rik, LOC623529, LOC100039833, LOC100039884
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-343P16.bB6Ng01-343P16.g
ACCGA126605GA126606
length1,139855
definitionB6Ng01-343P16.b B6Ng01-343P16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,421,841 - 74,422,974)(74,540,281 - 74,541,130)
sequence
gaattcacacaattcaacctagactctatgtttccctagtcctcactgaa
cattcatttttaaaaaataagttaagccttttttagaacatcatataaga
gcatcatatttatgtcatgaaccctatggtattctcatcaacccccttcc
aagtttatcttttctttagttattatttttctgtatgaacagtctattga
gtttctttagtgttgctcatatttaagtggggacagagatgaccacttag
cattggacacctctgtgggaactgatccctggagaatgagttttctcttt
ttcagtaaccattgataacctgtagttctttatctatatgtgggacaata
tgaaattacccacatccatgttggcatgccagctgatgctgtcatactag
atgagggggctcactacaggattcacaacagagtcactaggctgggtttg
aacataggatgtgtaactgggactaggacaggagaaacaacaaacaaaac
aaaacaacaggagcagcagcagcagcaaaatccaagagttctaagaactc
accagactaggctagcacacaggatgtgcaaacaaagctaggcaaaggca
tgctttcaaattttcactgactatcacttaggatctattcgacaacccat
gacagagtggattcctgggtttgtggtctactgtgatgaggctgcttgta
gccatgacattgagggacatttggttgaacagtcttctatctggatataa
cagaagaaagataacttacaaagttatatgatttttcatagtgcaatata
tgctaatcttaagaattttcacatatattaaatttccagagaatacattt
atttcttactaaggaatcaattgaccattcttcattttctgtctcttttt
cttcatgcatctgtctgtcttcattgttaaacattgctttaaaatatttc
tcaaaaaattcctctaggttctttaccctatctatcatacatatacgttt
tttgctttgaaagtagcttctcacttgcttttcctaaaccctatgtatca
ggttttgttgttgttattgacatgataaaggaatgatgacttggaagaag
ctggaaagaaggttaaggtttatatttgggcctactatt
gaattcctgttccatacaaaatacatacatttttctacacacatacacac
aaaacacacacatacacaaaacatacatgtatgtatatatacgcatatat
atttaaatatgtgtgtatatatggattgattgcctattaaatatgatatt
gatatgattatttcctgaagaaaaatagcccagagacatagatttctcca
gaccattactgaccatagctatttttaaatttttgatcttcttcattctt
tctgtttgtttgtttgtttgtttgtttgtttgtttgtttcgagacagggt
ttctctgtgtagtcctggctgtcctggaactcactctgtagaccaggctg
gcctcaaactcagaaatctgcctgcctctgcttcccaagtactgggatta
acggcgtgcgccaccacacctggctaattttgatcttcatgggactgtca
agaccatgttatgtcagacactttgtggaacatatttttgctttaccaca
gtttcaaactgtattaagtatcaaaacggtttactagaagcaatactcca
gatattctgcttttccgttgtgattctagctgaggtaaacacatgttctt
caattccaatctcaactactaatattaactcatgaaacatatatctcaaa
acaagtttaagtaaagatgcattttgtatgacacacacacaaacatgtgt
atatgtaggtttggttgctgagtgactataaatgataaagaggcaagaaa
gtttcaaaagggcttcataatcaggcaaatagagatgtaaatagcatttg
tatgaacagggtgatgttgacacattaaaaaccaagttgcaaagaagata
aatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_74421841_74422974
seq2: B6Ng01-343P16.b_48_1186

seq1  GAATTCACACAATTCAACCTAGACTCTATGTTTCCCTAGTCCTCACTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACAATTCAACCTAGACTCTATGTTTCCCTAGTCCTCACTGAA  50

seq1  CATTCATTTTTAAAAAATAAGTTAAGCCTTTTTTAGAACATCATATAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCATTTTTAAAAAATAAGTTAAGCCTTTTTTAGAACATCATATAAGA  100

seq1  GCATCATATTTATGTCATGAACCCTATGGTATTCTCATCAACCCCCTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCATATTTATGTCATGAACCCTATGGTATTCTCATCAACCCCCTTCC  150

seq1  AAGTTTATCTTTTCTTTAGTTATTATTTTTCTGTATGAACAGTCTATTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTATCTTTTCTTTAGTTATTATTTTTCTGTATGAACAGTCTATTGA  200

seq1  GTTTCTTTAGTGTTGCTCATATTTAAGTGGGGACAGAGATGACCACTTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTTAGTGTTGCTCATATTTAAGTGGGGACAGAGATGACCACTTAG  250

seq1  CATTGGACACCTCTGTGGGAACTGATCCCTGGAGAATGAGTTTTCTCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGACACCTCTGTGGGAACTGATCCCTGGAGAATGAGTTTTCTCTTT  300

seq1  TTCAGTAACCATTGATAACCTGTAGTTCTTTATCTATATGTGGGACAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTAACCATTGATAACCTGTAGTTCTTTATCTATATGTGGGACAATA  350

seq1  TGAAATTACCCACATCCATGTTGGCATGCCAGCTGATGCTGTCATACTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTACCCACATCCATGTTGGCATGCCAGCTGATGCTGTCATACTAG  400

seq1  ATGAGGGGGCTCACTACAGGATTCACAACAGAGTCACTAGGCTGGGTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGGGGCTCACTACAGGATTCACAACAGAGTCACTAGGCTGGGTTTG  450

seq1  AACATAGGATGTGTAACTGGGACTAGGACAGGAGAAACAACAAACAAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAGGATGTGTAACTGGGACTAGGACAGGAGAAACAACAAACAAAAC  500

seq1  AAAACAACAGGAGCAGCAGCAGCAGCAAAATCCAAGAGTTCTAAGAACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAACAGGAGCAGCAGCAGCAGCAAAATCCAAGAGTTCTAAGAACTC  550

seq1  ACCAGACTAGGCTAGCACACAGGATGTGCAAACAAAGCTAGGCAAAGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGACTAGGCTAGCACACAGGATGTGCAAACAAAGCTAGGCAAAGGCA  600

seq1  TGCTTTCAAATTTTCACTGACTATCACTTAGGATCTATTCGACAACCCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTCAAATTTTCACTGACTATCACTTAGGATCTATTCGACAACCCAT  650

seq1  GACAGAGTGGATTCCTGGGTTTGTGGTCTACTGTGATGAGGCTGCTTGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGTGGATTCCTGGGTTTGTGGTCTACTGTGATGAGGCTGCTTGTA  700

seq1  GCCATGACATTGAGGGACATTTGGTTGAACAGTCTTCTATCTGGATATAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGACATTGAGGGACATTTGGTTGAACAGTCTTCTATCTGGATATAA  750

seq1  CAGAAGAAAGATAACTTACAAAGTTATATGATTTTTCATAGTGCAATATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGAAAGATAACTTACAAAGTTATATGATTTTTCATAGTGCAATATA  800

seq1  TGCTAATCTTAAGAATTTTCACATATATTAAATTTCCAGAGAATACATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAATCTTAAGAATTTTCACATATATTAAATTTCCAGAGAATACATTT  850

seq1  ATTTCTTACTAAGGAATCAATTGACCATTCTTCATTTTCTGTCTCTTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTACTAAGGAATCAATTGACCATTCTTCATTTTCTGTCTCTTTTT  900

seq1  CTTCATGCATCTGTCTGTCTTCATTGTTAAACATTGCTTTAAAATATTTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATGCATCTGTCTGTCTTCATTGTTAAACATTGCTTTAAAATATTTC  950

seq1  TCAAAAAATTCCTCTAGGTTCTTTACCCTATCTATCATACATATACGTTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAAATTCCTCTAGGTTCTTTACCCTATCTATCATACATATACGTTT  1000

seq1  TTTGCTTTGAAAGTAGCTTCTCACCTGCTTTTCCTAAACCCTATGTATCA  1050
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TTTGCTTTGAAAGTAGCTTCTCACTTGCTTTTCCTAAACCCTATGTATCA  1050

seq1  GGTTTTGTTGTTGTTATTGACATGATAAAAGAATGATGACTT-GAAGAAA  1099
      ||||||||||||||||||||||||||||| |||||||||||| |||||| 
seq2  GGTTTTGTTGTTGTTATTGACATGATAAAGGAATGATGACTTGGAAGAAG  1100

seq1  CT-GAGAGAAGGTTAAG---TTTATTTTGGCTTACTATT  1134
      || || |||||||||||   | ||||| ||| |||||||
seq2  CTGGAAAGAAGGTTAAGGTTTATATTTGGGCCTACTATT  1139

seq1: chr4_74540281_74541130
seq2: B6Ng01-343P16.g_67_921 (reverse)

seq1  ATATTTTTTCTTCTTTGCAACTTGGTTTTT-ATTTGTC-ACATCACCCTG  48
      ||| ||| |||||||||||||||||||||| || |||| |||||||||||
seq2  ATA-TTTATCTTCTTTGCAACTTGGTTTTTAATGTGTCAACATCACCCTG  49

seq1  TTCATACAAATGCTATTTACATCTCTATTTGCCTGATTATG-AGCCCTTT  97
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTCATACAAATGCTATTTACATCTCTATTTGCCTGATTATGAAGCCCTTT  99

seq1  TGAAAC-TTCTTGCCTCTTTTATCATTTATAGTCACTCAGCAACC-AACC  145
      |||||| |||||||||| ||||||||||||||||||||||||||| ||||
seq2  TGAAACTTTCTTGCCTC-TTTATCATTTATAGTCACTCAGCAACCAAACC  148

seq1  TACATATACACATGTTTGTGTGTGTGTCATAC-AAATGCATCTTTACTT-  193
      |||||||||||||||||||||||||||||||| |||||||||||||||| 
seq2  TACATATACACATGTTTGTGTGTGTGTCATACAAAATGCATCTTTACTTA  198

seq1  AACTTGTTTTGAGATATATGTTTCATGAGTTAATATTAGTAGTTGAGATT  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGTTTTGAGATATATGTTTCATGAGTTAATATTAGTAGTTGAGATT  248

seq1  GGAATTGAAGAACATGTGTTTACCTCAGCTAGAATCACAACGGAAAAGCA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTGAAGAACATGTGTTTACCTCAGCTAGAATCACAACGGAAAAGCA  298

seq1  GAATATCTGGAGTATTGCTTCTAGTAAACCGTTTTGATACTTAATACAGT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATCTGGAGTATTGCTTCTAGTAAACCGTTTTGATACTTAATACAGT  348

seq1  TTGAAACTGTGGTAAAGCAAAAATATGTTCCACAAAGTGTCTGACATAAC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAACTGTGGTAAAGCAAAAATATGTTCCACAAAGTGTCTGACATAAC  398

seq1  ATGGTCTTGACAGTCCCATGAAGATCAAAATTAGCCAGGTGTGGTGGCGC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTCTTGACAGTCCCATGAAGATCAAAATTAGCCAGGTGTGGTGGCGC  448

seq1  ACGCCGTTAATCCCAGTACTTGGGAAGCAGAGGCAGGCAGATTTCTGAGT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCCGTTAATCCCAGTACTTGGGAAGCAGAGGCAGGCAGATTTCTGAGT  498

seq1  TTGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGACTACA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGACTACA  548

seq1  CAGAGAAACCCTGTCTCGAAACAAACAAACAAACAAACAAACAAACAAAC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAACCCTGTCTCGAAACAAACAAACAAACAAACAAACAAACAAAC  598

seq1  AAACAGAAAGAATGAAGAAGATCAAAAATTTAAAAATAGCTATGGTCAGT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAAAGAATGAAGAAGATCAAAAATTTAAAAATAGCTATGGTCAGT  648

seq1  AATGGTCTGGAGAAATCTATGTCTCTGGGCTATTTTTCTTCAGGAAATAA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTCTGGAGAAATCTATGTCTCTGGGCTATTTTTCTTCAGGAAATAA  698

seq1  TCATATCAATATCATATTTAATAGGCAATCAATCCATATATACACACATA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATCAATATCATATTTAATAGGCAATCAATCCATATATACACACATA  748

seq1  TTTAAATATATATGCGTATATATACATACATGTATGTTTTGTGTATGTGT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATATATATGCGTATATATACATACATGTATGTTTTGTGTATGTGT  798

seq1  GTGTTTTGTGTGTATGTGTGTAGAAAAATGTATGTATTTTGTATGGAACA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTGTGTGTATGTGTGTAGAAAAATGTATGTATTTTGTATGGAACA  848

seq1  GGAATTC  850
      |||||||
seq2  GGAATTC  855