BAC Information

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BAC

Clone NameB6Ng01-344I14
Chromosome4 (Build37)
Map Location 57,752,104 - 57,868,614
singlet/doubletdoublet
Overlap geneAkap2
Upstream geneActl7b, Actl7a, Ikbkap, BC026590, Ctnnal1, D730040F13Rik, 6430704M03Rik, Epb4.1l4b, Ptpn3, LOC100041460, 1700042G15Rik, LOC100041342, LOC619973, LOC667049, Palm2, LOC100041513
Downstream geneD630039A03Rik, Txn1, Txndc8, Svep1, Musk, Edg2, LOC675306, LOC433711, Olfr267, AI314180
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-344I14.bB6Ng01-344I14.g
ACCGA126996GA126997
length1,1291,134
definitionB6Ng01-344I14.b B6Ng01-344I14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,752,104 - 57,753,234)(57,867,473 - 57,868,614)
sequence
gaattccttctcaacatcttctctgatgtccaggcacagcttcacaacct
ccccaacttagattctccaagtctcttgtttgtgccaatcaaagcaagcc
ttgggctgggccgatgatgcaattttgaaaacaagctatgagatgtttat
ggtctgcagcaggcagcaccttcctccctcctctctgctcactctcctgt
tctcctttcctccttctcttctttgaactccatgtgcttggcatcagttg
ggacatagaggctggtgtctggggtctttctccaacattgtccaccttat
tttttgagacaggatgtctcaatgaatccagaacttgccagtttcaacaa
gactggttggctggcaatgccccaggattcacctttctccccaataccta
gcactagggttccagatgcaggtcactatgcctggttttttacataagtc
ctgggcgttcaaacagtttacccactaccccaagttcattttctccgtct
ctgtctctctctgtctctgtctctgtctctctctctctgcctctttaatt
ttatgtgcattggtgttttgcctgcatgtatgtctgtgagagggtgtcaa
atcacttagagctagattatagacagttctgagctgccgtgtaaatcctg
ggacttgaacctgggtcctctagaagagcagccagtgctcttaactacag
agccatttctccagtcccgtctcttttcatagaaattttttttagggtga
tggagattgaacccatctcttgggaatgctataactcttgatttacactc
ctggcatctctgagaagtaataaacacttcaacttgagtaggaatttatt
cattccagatacactgatttatcagattagtcgtttaaggttttatttta
tctttgactttaaaaaccccattttgaccaatttcatatagcaatttcat
gggggcatttgctgcaactcatcacccctggtggttagatactattcctc
tttatttaccatcactcatcagtctatgtgaatttggagtcatagactat
tatgttaatattttacgtagccaattttcaaaagcttaataaaatgttaa
atttaaagtaagggtgaagaaggaaaagg
gaattctccatcagctggaactgcttgcgtgcagccgagaagtcaatctg
ctcagtgaccacatcctcctttgtgtgttcaatgccatctaggtgtttgt
gagcagctggggctgtgcagggctgggacgtggacagctgctgctgttgc
agctgttgttgcagctgttgctgttgcagctgttgttgttgtagctgttg
ctgttgcagctgttgctgctgctgctgttgcaactgtagctgctcctgct
gggcccttttctctttgcgctccttgtactttctgtgcgactccagatgt
tcctcgtccagctgctcctcaatagttttctcctggggaggattccacca
cttggcggcgatgccaggattcttcttcacagcctgactccggatgagct
ccctccgctctttctccagctctatcatctcctcggagggcctcactttc
cggacgcagaactgctccttctcgcgctcgtcctcctcaaagagcttgga
gggcttcttgtcctcgtggaaggcacgcagctcaaacttggcctccttct
tcagtgtggtgagtgtgaactccccatctcgggaggagcagtgggagctg
gtagaggaactggggctggcaggtgcctgcaggctgttccccagcaggtc
ttggggctggtcagtggagtgtccattggctctttctccttcagccattc
tgtcggaggggcttctactgagctcgatgtgaggaggcacctgcctaccg
gatgctttctcagtgggttctgcctcggtgactgagtgggcaggcgagcc
taagctgcttaccagtatggctgcaccaggctctggggaggagatcccgt
tgtaagttccatccacagaggaatcacagcagttggcctccagcacttca
tcttaggtactggatctctctggcgacatcgttgtctaaagactcgttgg
tgatcagcgaggagccattgtgtgaaggcgaatagaaagggagagtggtc
cttggaatggggggtagagtgactccaggtaccttacattctgcacggac
accctcaattccatgtttttgtgaatctggggagaaagagctgcgcagct
caggcgacctgtacacacagttgtcttgcttgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_57752104_57753234
seq2: B6Ng01-344I14.b_43_1171

seq1  GAATTCCTTCTCAACATCTTCTCTGATGTCCAGGCACAGCTTCACAACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCTCAACATCTTCTCTGATGTCCAGGCACAGCTTCACAACCT  50

seq1  CCCCAACTTAGATTCTCCAAGTCTCTTGTTTGTGCCAATCAAAGCAAGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAACTTAGATTCTCCAAGTCTCTTGTTTGTGCCAATCAAAGCAAGCC  100

seq1  TTGGGCTGGGCCGATGATGCAATTTTGAAAACAAGCTATGAGATGTTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGCTGGGCCGATGATGCAATTTTGAAAACAAGCTATGAGATGTTTAT  150

seq1  GGTCTGCAGCAGGCAGCACCTTCCTCCCTCCTCTCTGCTCACTCTCCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGCAGCAGGCAGCACCTTCCTCCCTCCTCTCTGCTCACTCTCCTGT  200

seq1  TCTCCTTTCCTCCTTCTCTTCTTTGAACTCCATGTGCTTGGCATCAGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTTCCTCCTTCTCTTCTTTGAACTCCATGTGCTTGGCATCAGTTG  250

seq1  GGACATAGAGGCTGGTGTCTGGGGTCTTTCTCCAACATTGTCCACCTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATAGAGGCTGGTGTCTGGGGTCTTTCTCCAACATTGTCCACCTTAT  300

seq1  TTTTTGAGACAGGATGTCTCAATGAATCCAGAACTTGCCAGTTTCAACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAGACAGGATGTCTCAATGAATCCAGAACTTGCCAGTTTCAACAA  350

seq1  GACTGGTTGGCTGGCAATGCCCCAGGATTCACCTTTCTCCCCAATACCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGTTGGCTGGCAATGCCCCAGGATTCACCTTTCTCCCCAATACCTA  400

seq1  GCACTAGGGTTCCAGATGCAGGTCACTATGCCTGGTTTTTTACATAAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTAGGGTTCCAGATGCAGGTCACTATGCCTGGTTTTTTACATAAGTC  450

seq1  CTGGGCGTTCAAACAGTTTACCCACTACCCCAAGTTCATTTTCTCCGTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCGTTCAAACAGTTTACCCACTACCCCAAGTTCATTTTCTCCGTCT  500

seq1  CTGTCTCTCTCTGTCTCTGTCTCTGTCTCTCTCTCTCTGCCTCTTTAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCTCTCTGTCTCTGTCTCTGTCTCTCTCTCTCTGCCTCTTTAATT  550

seq1  TTATGTGCATTGGTGTTTTGCCTGCATGTATGTCTGTGAGAGGGTGTCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTGCATTGGTGTTTTGCCTGCATGTATGTCTGTGAGAGGGTGTCAA  600

seq1  ATCACTTAGAGCTAGATTATAGACAGTTCTGAGCTGCCGTGTAAATCCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTTAGAGCTAGATTATAGACAGTTCTGAGCTGCCGTGTAAATCCTG  650

seq1  GGACTTGAACCTGGGTCCTCTAGAAGAGCAGCCAGTGCTCTTAACTACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTGAACCTGGGTCCTCTAGAAGAGCAGCCAGTGCTCTTAACTACAG  700

seq1  AGCCATTTCTCCAGTCCCGTCTCTTTTCATAGAAATTTTTTTTAGGGTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATTTCTCCAGTCCCGTCTCTTTTCATAGAAATTTTTTTTAGGGTGA  750

seq1  TGGAGATTGAACCCATCTCTTGGGAATGCTATAACTCTTGATTTACACTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGATTGAACCCATCTCTTGGGAATGCTATAACTCTTGATTTACACTC  800

seq1  CTGGCATCTCTGAGAAGTAATAAACACTTCAACTTGAGTAGGAATTTATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCATCTCTGAGAAGTAATAAACACTTCAACTTGAGTAGGAATTTATT  850

seq1  CATTCCAGATACACTGATTTATCAGATTAGTCGTTTAAGGTTTTATTTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCAGATACACTGATTTATCAGATTAGTCGTTTAAGGTTTTATTTTA  900

seq1  TCTTTGACTTTAAAAACCCCATTTTGACCAATTTCATATAGCAATTTCAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGACTTTAAAAACCCCATTTTGACCAATTTCATATAGCAATTTCAT  950

seq1  GGGGGCATTTGCTGCAACTCATCACCCCT-GTGGTTAGATACTATT-CTC  998
      ||||||||||||||||||||||||||||| |||||||||||||||| |||
seq2  GGGGGCATTTGCTGCAACTCATCACCCCTGGTGGTTAGATACTATTCCTC  1000

seq1  TTTATTTACCATCACTCATCAGTCTATGTGAATTTGGAGTCATAGACTA-  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTTATTTACCATCACTCATCAGTCTATGTGAATTTGGAGTCATAGACTAT  1050

seq1  TATGTAATAAT-TTTTACGTAAGCCAATTTTTTAAAAAGCTT-ATAAAAT  1095
      |||||  |||| |||||||| ||||||  |||| |||||||| |||||||
seq2  TATGT--TAATATTTTACGT-AGCCAA--TTTTCAAAAGCTTAATAAAAT  1095

seq1  GTTAAAATTTTAAAGTAGGGGTGAGGAAGGAAAAGG  1131
      ||||||  ||||||||| |||||| |||||||||||
seq2  GTTAAA--TTTAAAGTAAGGGTGAAGAAGGAAAAGG  1129

seq1: chr4_57867473_57868614
seq2: B6Ng01-344I14.g_65_1198 (reverse)

seq1  AGCAAGCAAGACAACTGTGGTGACA-GTCGCCTGGAGCCTGCCGCCAGCT  49
      |||||||||||||||||||   ||| ||||||| ||| ||||   |||||
seq2  AGCAAGCAAGACAACTGTGTGTACAGGTCGCCT-GAG-CTGC--GCAGCT  46

seq1  CTCTCTCCCCAGA-TCACAAAAACATGGAAATTGGGGTGTCCGTGGCAGA  98
      || |||||||||| |||||||||||||||| |  |||||||||| |||||
seq2  CTTTCTCCCCAGATTCACAAAAACATGGAATTGAGGGTGTCCGT-GCAGA  95

seq1  ATGTAAAAGTGTACCTGGAGTCACCTCTACCCCCCATTCCAAGGACCACT  148
      ||||||    ||||||||||||| ||||||||||||||||||||||||||
seq2  ATGTAA---GGTACCTGGAGTCA-CTCTACCCCCCATTCCAAGGACCACT  141

seq1  CCTCCCCTTTCTATTCGCCCTCACACAATGGCCTCCTCGCTGATCACC-A  197
      |   ||||||||||||||| ||||||||||| |||||||||||||||| |
seq2  C--TCCCTTTCTATTCGCCTTCACACAATGG-CTCCTCGCTGATCACCAA  188

seq1  CGAGTCTTTAGACAACGATGTCGCCAGAGAGATCCAGTACCT-AGATGAA  246
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CGAGTCTTTAGACAACGATGTCGCCAGAGAGATCCAGTACCTAAGATGAA  238

seq1  GTGCTGGAGGCCAACTGCTGTGATTCCTCTGTGGATGGAACTTACAACGG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGGAGGCCAACTGCTGTGATTCCTCTGTGGATGGAACTTACAACGG  288

seq1  AATCTCCTCCCCAGAGCCTGGTGCAGCCATACTGGTAAGCAGCTTAGGCT  346
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCCTCCCCAGAGCCTGGTGCAGCCATACTGGTAAGCAGCTTAGGCT  338

seq1  CGCCTGCCCACTCAGTCACCGAGGCAGAACCCACTGAGAAAGCATCCGGT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTGCCCACTCAGTCACCGAGGCAGAACCCACTGAGAAAGCATCCGGT  388

seq1  AGGCAGGTGCCTCCTCACATCGAGCTCAGTAGAAGCCCCTCCGACAGAAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGTGCCTCCTCACATCGAGCTCAGTAGAAGCCCCTCCGACAGAAT  438

seq1  GGCTGAAGGAGAAAGAGCCAATGGACACTCCACTGACCAGCCCCAAGACC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAAGGAGAAAGAGCCAATGGACACTCCACTGACCAGCCCCAAGACC  488

seq1  TGCTGGGGAACAGCCTGCAGGCACCTGCCAGCCCCAGTTCCTCTACCAGC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGGAACAGCCTGCAGGCACCTGCCAGCCCCAGTTCCTCTACCAGC  538

seq1  TCCCACTGCTCCTCCCGAGATGGGGAGTTCACACTCACCACACTGAAGAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACTGCTCCTCCCGAGATGGGGAGTTCACACTCACCACACTGAAGAA  588

seq1  GGAGGCCAAGTTTGAGCTGCGTGCCTTCCACGAGGACAAGAAGCCCTCCA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCCAAGTTTGAGCTGCGTGCCTTCCACGAGGACAAGAAGCCCTCCA  638

seq1  AGCTCTTTGAGGAGGACGAGCGCGAGAAGGAGCAGTTCTGCGTCCGGAAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTTTGAGGAGGACGAGCGCGAGAAGGAGCAGTTCTGCGTCCGGAAA  688

seq1  GTGAGGCCCTCCGAGGAGATGATAGAGCTGGAGAAAGAGCGGAGGGAGCT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGCCCTCCGAGGAGATGATAGAGCTGGAGAAAGAGCGGAGGGAGCT  738

seq1  CATCCGGAGTCAGGCTGTGAAGAAGAATCCTGGCATCGCCGCCAAGTGGT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCGGAGTCAGGCTGTGAAGAAGAATCCTGGCATCGCCGCCAAGTGGT  788

seq1  GGAATCCTCCCCAGGAGAAAACTATTGAGGAGCAGCTGGACGAGGAACAT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCCTCCCCAGGAGAAAACTATTGAGGAGCAGCTGGACGAGGAACAT  838

seq1  CTGGAGTCGCACAGAAAGTACAAGGAGCGCAAAGAGAAAAGGGCCCAGCA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGTCGCACAGAAAGTACAAGGAGCGCAAAGAGAAAAGGGCCCAGCA  888

seq1  GGAGCAGCTACAGTTGCAACAGCAGCAGCAGCAACAGCTGCAACAGCAAC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAGCTACAGTTGCAACAGCAGCAGCAGCAACAGCTGCAACAGCAAC  938

seq1  AGCTACAACAACAACAGCTGCAACAGCAACAGCTGCAACAACAGCTGCAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACAACAACAACAGCTGCAACAGCAACAGCTGCAACAACAGCTGCAA  988

seq1  CAGCAGCAGCTGTCCACGTCCCAGCCCTGCACAGCCCCAGCTGCTCACAA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGCAGCTGTCCACGTCCCAGCCCTGCACAGCCCCAGCTGCTCACAA  1038

seq1  ACACCTAGATGGCATTGAACACACAAAGGAGGATGTGGTCACTGAGCAGA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTAGATGGCATTGAACACACAAAGGAGGATGTGGTCACTGAGCAGA  1088

seq1  TTGACTTCTCGGCTGCACGCAAGCAGTTCCAGCTGATGGAGAATTC  1142
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTTCTCGGCTGCACGCAAGCAGTTCCAGCTGATGGAGAATTC  1134