BAC Information

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BAC

Clone NameB6Ng01-344M12
Chromosome4 (Build37)
Map Location 50,897,759 - 50,898,710
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666663
Downstream geneLOC100040979, LOC666681, LOC100040814
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-344M12.bB6Ng01-344M12.g
ACCGA127177GA127178
length9531,219
definitionB6Ng01-344M12.b B6Ng01-344M12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaattttgttttatgtagaaaaaaatgtactggttttatttattg
ggttgaaagaaatgattgggataatgggaaattctgtgtcctaccatggg
ttctctaaatggagacaccaggaaagaaaaaaatggtgattgagacaatg
cttatgatcaccaaaatgtgaagaagaggtaagcaagaagcagcaccttt
agtctttggtgtgtgcttagtaacagaaacaaacaatacaacagcaacaa
caaaaagaaagtcaggagaaggggggagaaagaacctggagctggaacac
acatcaaaatgttgcctttaataaaactagcagcctcaatcagtcccata
ttacgatcaaagcattccagcacagcacaaaaaacatgagctcctcctag
gcttgtacacaggaagaacacaaactcagagcagtaatgtagtgttgagc
tatggggattgaggacagctctctgtctcttgtaacaggcttcagaggaa
tagctgaggagcacatatgtccctgggtggacctttgtgaagacactctg
tctcttttattctagtgacatttggtcattgattatctaagtcatttaca
gttttacttgacatttgaaattgtgtaaatttgcatgattctaatgagaa
aagttttttttttttatttttgaggcaagttcacgtggtgagaacactgc
tgttgtattaacaaacttaatcctcagtcttcatactgatttattttaaa
aactgcttccttaatatggtaaatcaaaggacaactttcatgatgttagt
tttagtgtagcaaagttagtgtaaaatagaaatttctttacaatttaaat
ggacctgaaaacaataaacaactatacctattgtttgttttctttgaatc
ttagcatttgtgtgtatatatgtgagtatatatttgtatgttataatatt
ttt

gaattcatttctgggtcttaaattctattccattggttcacttgtcttta
actatatcagtaccattcagtttttatcacaattgctctgtagtacagca
ttaggtcagccatggtgattccaccagaggttcttttatcctttagaaga
gtttttgctatcccagatttttttgttattccaggtgaatttgtagattg
ctctttctaattcgttgaagaattgaattggaattttgatgggagttgca
ttgaatcagtagattgcttttggcaagatagccatttttactatattgat
cctgccaatccatgagcatgggagatcttttatcttctgagatcttcttt
aatttctttcttcagagacttgaagttcttatcatacagatctttcacct
ccttagttagagtcacacaaagctattttatattatttgtgactattgag
aagggtattttttctctaatttctttctcattctgtttatcctttgtgta
gagaaaggccattgacttgtttgagttaattttatatccaggtacttcac
tgaagctatttaacaggtctaggagttctctggtggaatttttaaggtca
cttttatatactatcatatcatctgcaaaaagtgatattttgacttcttc
cttgccaatatgtatccctttgatctccttttgttgtcgaatttctccgg
ctaggacttcaagtacagtgttgactaggtagagagaaagtgggcaactt
tgtctagtccctgattttagtggaatttcttccagcttctcaacatttac
tatgatgttggctactggtttgctgtagattgcttttatcatgtttaggt
atgggccttgaattcctgatctttccaagacttttatcatgaatgggtgt
tggattttgtcaaatgccttctctgcatctaaagagatgatcatgtggtt
ttgtctttgagtttgtttatataatggatatgtgatgtatttcatatatt
ataccacccctgcatctctgggatgaaaccaacttggtcaggatggatga
tttgtttgatgtgttctgatttttatgagtatttttgcctcatattcata
agggaattggtctgaggtctctaatcttgtgggtctttcctgtgggttta
agatctagcactgtgctcctagatatggaggagacccttctgctcttcta
ttttgttgagaaatagatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_50897759_50898710
seq2: B6Ng01-344M12.b_46_998

seq1  GAATTCAATTTTGTTTTATGTAGAAAAAAATGTACTGGTTTTATTTATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTTTGTTTTATGTAGAAAAAAATGTACTGGTTTTATTTATTG  50

seq1  GGTTGAAAGAAATGATTGGGATAATGGGAAATTCTGTGTCCTACCATGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGAAAGAAATGATTGGGATAATGGGAAATTCTGTGTCCTACCATGGG  100

seq1  TTCTCTAAATGGAGACACCAGGAAAGAAAAAAATGGTGATTGAGACAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTAAATGGAGACACCAGGAAAGAAAAAAATGGTGATTGAGACAATG  150

seq1  CTTATGATCACCAAAATGTGAAGAAGAGGTAAGCAAGAAGCAGCACCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGATCACCAAAATGTGAAGAAGAGGTAAGCAAGAAGCAGCACCTTT  200

seq1  AGTCTTTGGTGTGTGCTTAGTAACAGAAACAAACAATACAACAGCAACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTTGGTGTGTGCTTAGTAACAGAAACAAACAATACAACAGCAACAA  250

seq1  CAAAAAGAAAGTCAGGAGAAGGGGGGAGAAAGAACCTGGAGCTGGAACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAGAAAGTCAGGAGAAGGGGGGAGAAAGAACCTGGAGCTGGAACAC  300

seq1  ACATCAAAATGTTGCCTTTAATAAAACTAGCAGCCTCAATCAGTCCCATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAAAATGTTGCCTTTAATAAAACTAGCAGCCTCAATCAGTCCCATA  350

seq1  TTACGATCAAAGCATTCCAGCACAGCACAAAAAACATGAGCTCCTCCTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACGATCAAAGCATTCCAGCACAGCACAAAAAACATGAGCTCCTCCTAG  400

seq1  GCTTGTACACAGGAAGAACACAAACTCAGAGCAGTAATGTAGTGTTGAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTACACAGGAAGAACACAAACTCAGAGCAGTAATGTAGTGTTGAGC  450

seq1  TATGGGGATTGAGGACAGCTCTCTGTCTCTTGTAACAGGCTTCAGAGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGGATTGAGGACAGCTCTCTGTCTCTTGTAACAGGCTTCAGAGGAA  500

seq1  TAGCTGAGGAGCACATATGTCCCTGGGTGGACCTTTGTGAAGACACTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGAGGAGCACATATGTCCCTGGGTGGACCTTTGTGAAGACACTCTG  550

seq1  TCTCTTTTATTCTAGTGACATTTGGTCATTGATTATCTAAGTCATTTACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTTATTCTAGTGACATTTGGTCATTGATTATCTAAGTCATTTACA  600

seq1  GTTTTACTTGACATTTGAAATTGTGTAAATTTGCATGATTCTAATGAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTACTTGACATTTGAAATTGTGTAAATTTGCATGATTCTAATGAGAA  650

seq1  AAGTTTTTTTTTTTTATTTTTGAGGCAAGTTCACGTGGTGAGAACACTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTTTTTTTTTTATTTTTGAGGCAAGTTCACGTGGTGAGAACACTGC  700

seq1  TGTTGTATTAACAAACTTAATCCTCAGTCTTCATACTGATTTATTTTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTATTAACAAACTTAATCCTCAGTCTTCATACTGATTTATTTTAAA  750

seq1  AACTGCTTCCTTAATATGGTAAATCAAAGGACAACTTTCATGATGTTAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCTTCCTTAATATGGTAAATCAAAGGACAACTTTCATGATGTTAGT  800

seq1  TTTAGTGTAGCAAAGTTAGTGTAAAATAGAAATTTCTTTACAATTTAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTGTAGCAAAGTTAGTGTAAAATAGAAATTTCTTTACAATTTAAAT  850

seq1  GGACCTGAAAACAATAAAACAACTATACCTATTGTTTGTTTTCTTTGAAT  900
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GGACCTGAAAACAAT-AAACAACTATACCTATTGTTTGTTTTCTTTGAAT  899

seq1  CTTAGCATTTGTGTGTATATATGTGAGTATATATTTGTATG-TAT-ATAT  948
      ||||||||||||||||||||||||||||||||||||||||| ||| ||||
seq2  CTTAGCATTTGTGTGTATATATGTGAGTATATATTTGTATGTTATAATAT  949

seq1  TTTT  952
      ||||
seq2  TTTT  953


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