BAC Information

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BAC

Clone NameB6Ng01-344P20
Chromosome4 (Build37)
Map Location 149,866,561 - 149,867,612
singlet/doubletsinglet
Overlap geneRere
Upstream geneLzic, Ctnnbip1, Clstn1, Pik3cd, D4Ertd429e, Slc25a33, Spsb1, H6pd, Gpr157, Slc2a5, LOC435818, Car6, LOC100041882, Eno1, LOC666880, LOC384091
Downstream geneSlc45a1, LOC677027, Errfi1, Park7, Tnfrsf9, Uts2, Per3, Vamp3, Camta1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-344P20.g
ACCGA127333
length1,068
definitionB6Ng01-344P20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctaatggggatgagccaccatgaggttgggaggaattgaacctg
ggtccactagaatagcagtttatgcttttaactgcttagccatctctcta
tcccctttgtttttatagatgactccttctatatctggtaacatttggtg
tttctattctttttttgttttgttttgtttttgttgttagtggtggtttt
ttttgagacagggtttctctgtatagccctggctgtcctggaactcactc
tgtagaccaggctggcctctcagaaatccacctgcctctgcctcccgagt
gctgggattaaaggcatgcgccaccacgcccggcggtgtttctattctta
accttgcccagtatagttacatagatgaggaaggtaattgatgccttttg
cctctttgcccaccatattcacagaactacagtaaagagttctcttatgc
attggcctggactttaagcgtttcagactcttccagtggggcagagagac
cttggaagtgtgctgtggcccttgcttactggctctgtcttctctctctg
ggagtgctgtcaggcttagtgtgtagtttgatttcagtgcatggaaagtc
ctgtctttgcttaggagatcaactcaatcctggaggacaactgttacatt
ttggtatgcatatgtacccatatgcacttttgctaagctgtggttgttaa
agccatttgtgtttgtacagaagatgaagacagtaaagtccaggaaagag
cctgggaatggggttagagatagatacagttgccaggtgccctgggcaga
ccactgaatggcaggtaaagaaaggaaggcagtgaacaaggtgttcacag
cacttgggagcactcctttcctccttctgttgtctacattgtcttccttt
cagctaagccagcaaatgcctgctgctgctttcttttacagtagcccaac
ttctcccagcttccaggctcagcctcgtgcaacacaccctaattcttcac
cattgttttcagcctgttttcctctgattagaaaatggtttgaatgaaag
gtatttatgtggttcttc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_149866561_149867612
seq2: B6Ng01-344P20.g_67_1134

seq1  GAATTCCAGATGGTGATGAGCCACCATATGGTTGGGAGGAATTGAACCTA  50
      |||||||  |||| |||||||||||||  |||||||||||||||||||| 
seq2  GAATTCCTAATGGGGATGAGCCACCATGAGGTTGGGAGGAATTGAACCTG  50

seq1  GGTCCACTAGAAGAGCAGTTAGTGCTTTTAACTGCTTAGCCATCTCTCTA  100
      |||||||||||| |||||||  ||||||||||||||||||||||||||||
seq2  GGTCCACTAGAATAGCAGTTTATGCTTTTAACTGCTTAGCCATCTCTCTA  100

seq1  GCCCCTTTGTTTTTAAAGAAGACCTCCTTCTATATCTGGTAACATTTGGT  150
       |||||||||||||| ||| || |||||||||||||||||||||||||||
seq2  TCCCCTTTGTTTTTATAGATGA-CTCCTTCTATATCTGGTAACATTTGGT  149

seq1  GTTTCTATTCTTTTTTTGTTTTGTTTTGTTTTTGTTGTTAGTGGTGGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTATTCTTTTTTTGTTTTGTTTTGTTTTTGTTGTTAGTGGTGGTTT  199

seq1  TTTTTGAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCACT  249

seq1  CTGTAGACCAGGCTGGCCTCTCAGAAATCCACCTGCCTCTGCCTCCCGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGACCAGGCTGGCCTCTCAGAAATCCACCTGCCTCTGCCTCCCGAG  299

seq1  TGCTGGGATTAAAGGCATGCGCCACCACGCCCGGCGGTGTTTCTATTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGATTAAAGGCATGCGCCACCACGCCCGGCGGTGTTTCTATTCTT  349

seq1  AACCTTGCCCAGTATAGTTACATAGATGAGGAAGGTAATTGATGCCTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTGCCCAGTATAGTTACATAGATGAGGAAGGTAATTGATGCCTTTT  399

seq1  GCCTCTTTGCCCACCATATTCACAGAACTACAGTAAAGAGTTCTCTTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTTTGCCCACCATATTCACAGAACTACAGTAAAGAGTTCTCTTATG  449

seq1  CATTGGCCTGGACTTTAAGCGTTTCAGACTCTTCCAGTGGGGCAGAGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGCCTGGACTTTAAGCGTTTCAGACTCTTCCAGTGGGGCAGAGAGA  499

seq1  CCTTGGAAGTGTGCTGTGGCCCTTGCTTACTGGCTCTGTCTTCTCTCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGAAGTGTGCTGTGGCCCTTGCTTACTGGCTCTGTCTTCTCTCTCT  549

seq1  GGGAGTGCTGTCAGGCTTAGTGTGTAGTTTGATTTCAGTGCATGGAAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTGCTGTCAGGCTTAGTGTGTAGTTTGATTTCAGTGCATGGAAAGT  599

seq1  CCTGTCTTTGCTTAGGAGATCAACTCAATCCTGGAGGACAACTGTTACA-  649
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CCTGTCTTTGCTTAGGAGATCAACTCAATCCTGGAGGACAACTGTTACAT  649

seq1  TTTGGTATGCATATGTACCCATATGCACTTTTGCTAAGCTGTGGTTGTTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTATGCATATGTACCCATATGCACTTTTGCTAAGCTGTGGTTGTTA  699

seq1  AAGCCATTTGTGTTTGTACAGAAGATGAAGACAGTAAAGTCCAGG-AAGA  748
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AAGCCATTTGTGTTTGTACAGAAGATGAAGACAGTAAAGTCCAGGAAAGA  749

seq1  GCCT-GGAATGGGGTTAGAGATAGATACAGTTGCCAGGTGCCCTGGGCAG  797
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGGAATGGGGTTAGAGATAGATACAGTTGCCAGGTGCCCTGGGCAG  799

seq1  ACCACTGAATGGCAGGT-AAGAAAGGAAGGCAGTGAACAAGGTG-TCACA  845
      ||||||||||||||||| |||||||||||||||||||||||||| |||||
seq2  ACCACTGAATGGCAGGTAAAGAAAGGAAGGCAGTGAACAAGGTGTTCACA  849

seq1  GCACTTGGGAGCAACTCCTT--CTCC-TCTGTTGTCTACATTGTCTTCCT  892
      |||||||||||| |||||||  |||| |||||||||||||||||||||||
seq2  GCACTTGGGAGC-ACTCCTTTCCTCCTTCTGTTGTCTACATTGTCTTCCT  898

seq1  TCCAGCT-AGCCAGCAAATG-CTGCTGCTGCTTCCTTTTACAGTAGCCCA  940
      | ||||| |||||||||||| |||||||||||| ||||||||||||||||
seq2  TTCAGCTAAGCCAGCAAATGCCTGCTGCTGCTTTCTTTTACAGTAGCCCA  948

seq1  AC-TCTCCCAGCTT-CAGGCTCAGCCTCGTGCCACCACACCC-AATTC-T  986
      || ||||||||||| |||||||||||||||| || ||||||| ||||| |
seq2  ACTTCTCCCAGCTTCCAGGCTCAGCCTCGTG-CAACACACCCTAATTCTT  997

seq1  CA-CATTGTTTTCAGCCTGTTT--CTCTGATATGAGATGGTTTTGAGTGA  1033
      || |||||||||||||||||||  |||||||  || |  | ||||| |||
seq2  CACCATTGTTTTCAGCCTGTTTTCCTCTGATTAGAAAATGGTTTGAATGA  1047

seq1  AAGGTATTTA--TGGTTCTTC  1052
      ||||||||||  |||||||||
seq2  AAGGTATTTATGTGGTTCTTC  1068