BAC Information

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BAC

Clone NameB6Ng01-345O19
Chromosome4 (Build37)
Map Location 113,800,276 - 113,801,331
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC230622, LOC100040607, LOC242627, LOC100040625
Downstream geneA630098G03Rik, LOC666048, Foxd2, LOC100040736, Foxe3, Cmpk, Stil, Tal1, Pdzk1ip1, Cyp4x1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-345O19.bB6Ng01-345O19.g
ACCGA127971GA127972
length1,0921,048
definitionB6Ng01-345O19.b B6Ng01-345O19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttttgtgattgggttacattactcaggatgataccccccagatc
catccatttgcctaagaatttcataaattcactctttttaatagccgagt
agtattccattgtgtaaatgtaccacattttctgtatccattcctctgtt
gaagggtatctgggttctttccagcttctggatactataaataaggctac
tatgaacatagtggagcatatgttcttattaccagttggaacatcttctg
gatatattcccagaagtggtattgctgtatcttatggtagtactatgtcc
atatttctgaggaaccaccagactgatttccagaataattgtacaagctt
gcaatcccaccaaaaatggaggagtgttcctctttctccatatcctcacc
agcttctgctgtcacctgaatttttgatcttagccattctgattggtatg
aagtgaaatcttagggttgatttgatttgcatttccctgatgattaagga
tgctgaacattttttcaggtgcttctcagccattcggtattccttaagtg
agaattctttgtttagctctgtgccccatttttaattgggttatttgatt
ttctggagtccaccttcttgagttctttgtacatgttggaaactagtctc
ctattggatttaggattggtaaaagtccttttccaatctgttggtggcct
ttttgtcttattgacagtggtttttgccttacagaagctttgcaatttta
tgaggtcccatttgtagattgtcaaccttaatagcccaagtcattgctgt
ctgtaaggaatttaacctggtgcccacatctttgaggcttccccactttc
tcttctataaagtttagcgtttctcgtttatatggagtcctgatccacta
gactgagcttgtcaaaggagtaagaattgatcatgagacatattgttctg
atccacctgaactgtctcacaggtgaagtggactatacagagactacgct
ctgttcagcagaaccagcttctaggcaaccattcaggctctgaatccgac
tctgtcagaaggtcgtctcgttgcagactgccatatctagag
gaattcctgctttttaaattctattttaatatggttaagagataggaagc
atggggctgaccctgtgctacagctatctggaccccagtcctgccccaca
ccccagtccttccaggaaagagctggtcttctgggagtgctaacactcca
aagatcacagaagtgctgacacacctaagaggaccatgggttcacgggct
cattgaagtgacaagctccagttacagaaagcaaagccagctattgagat
gccaaatcttgtaaattcagactccattttagagaagccgacctaagttt
gaactcaggtaaactaacaatctagtacctagcattaatttccaagctgc
ccccaaacaaaacccaagcttagctccagtctctagctaatccccaacat
gaccagtgtttccaggttaaaccctcaagaccaggttaatccctcaacaa
acctacacccccaggttacaagcccactccctgcctaatgagtaccattg
cagaggggagcagaaattaagttaatgatatgagtcccagcaccagacaa
ttatgttgaaggccacagtaactttccaattagaaagttagtatgctttc
caattagtatgtttgtacacatactccctgctttccgcttactctaaagc
tttgtcccaataaacatttggagctcctccaccaccaaaaccatagtgca
tgaaggtgttgctttgcaggaggagcaagctaacttgaatagaataaaga
ccctgctgtggattgcatcagattggatcctatatgtattttgagggatc
agtaacatttccctggcaaaatattttggagcattggccgagaacttccc
catgacacacaagactgactacctctctctggcgggaggcgtgttgaagc
cagcaaaactagtttaggtattgtgtttttatgtttgtaataatgagcac
tgaattcgagcttttcttgtgtgagatctgcagagcagaagagccagcta
gtgtagaagtaatgtgacctttcactgtgctagatggtttatttgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_113800276_113801331
seq2: B6Ng01-345O19.g_67_1114

seq1  GAATTCCTGCTTTTTAAATTCTATTTTAATATGGTTAAGAGATAGGAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCTTTTTAAATTCTATTTTAATATGGTTAAGAGATAGGAAGC  50

seq1  ATGGGGCTGACCCTGTGCTACAGCTATCTGGACCCCAGTCCTGCCCCACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGCTGACCCTGTGCTACAGCTATCTGGACCCCAGTCCTGCCCCACA  100

seq1  CCCCAGTCCTTCCAGGAAAGAGCTGGTCTTCTGGGAGTGCTAACACTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGTCCTTCCAGGAAAGAGCTGGTCTTCTGGGAGTGCTAACACTCCA  150

seq1  AAGATCACAGAAGTGCTGACACACCTAAGAGGACCATGGGTTCACGGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCACAGAAGTGCTGACACACCTAAGAGGACCATGGGTTCACGGGCT  200

seq1  CATTGAAGTGACAAGCTCCAGTTACAGAAAGCAAAGCCAGCTATTGAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAAGTGACAAGCTCCAGTTACAGAAAGCAAAGCCAGCTATTGAGAT  250

seq1  GCCAAATCTTGTAAATTCAGACTCCATTTTAGAGAAGCCGACCTAAGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAATCTTGTAAATTCAGACTCCATTTTAGAGAAGCCGACCTAAGTTT  300

seq1  GAACTCAGGTAAACTAACAATCTAGTACCTAGCATTAATTTCCAAGCTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCAGGTAAACTAACAATCTAGTACCTAGCATTAATTTCCAAGCTGC  350

seq1  CCCCAAACAAAACCCAAGCTTAGCTCCAGTCTCTAGCTAATCCCCAACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAACAAAACCCAAGCTTAGCTCCAGTCTCTAGCTAATCCCCAACAT  400

seq1  GACCAGTGTTTCCAGGTTAAACCCTCAAGACCAGGTTAATCCCTCAACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGTGTTTCCAGGTTAAACCCTCAAGACCAGGTTAATCCCTCAACAA  450

seq1  ACCTACACCCCCAGGTTACAAGCCCACTCCCTGCCTAATGAGTACCATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACACCCCCAGGTTACAAGCCCACTCCCTGCCTAATGAGTACCATTG  500

seq1  CAGAGGGGAGCAGAAATTAAGTTAATGATATGAGTCCCAGCACCAGACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGGGAGCAGAAATTAAGTTAATGATATGAGTCCCAGCACCAGACAA  550

seq1  TTATGTTGAAGGCCACAGTAACTTTCCAATTAGAAAGTTAGTATGCTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTTGAAGGCCACAGTAACTTTCCAATTAGAAAGTTAGTATGCTTTC  600

seq1  CAATTAGTATGTTTGTACACATACTCCCTGCTTTCCGCTTACTCTAAAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAGTATGTTTGTACACATACTCCCTGCTTTCCGCTTACTCTAAAGC  650

seq1  TTTGTCCCAATAAACATTTGGAGCTCCTCCACCACCAAAACCATAGTGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCCCAATAAACATTTGGAGCTCCTCCACCACCAAAACCATAGTGCA  700

seq1  TGAAGGTGTTGCTTTGCAGGAGGAGCAAGCTAACTTGAATAGAATAAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGTGTTGCTTTGCAGGAGGAGCAAGCTAACTTGAATAGAATAAAGA  750

seq1  CCCTGCTGTGGATTGCATCAGATTGGATCCTATATGTATTTTGAGGGATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCTGTGGATTGCATCAGATTGGATCCTATATGTATTTTGAGGGATC  800

seq1  AGTAACATTTCCCTGGCAAAATATTTTGGAGCATTGGCCGAGAACTTCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACATTTCCCTGGCAAAATATTTTGGAGCATTGGCCGAGAACTTCCC  850

seq1  CATGACACACAAGACTGACTACCTCTCTCTGGCGGGAGGCGTGTTGAAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACACACAAGACTGACTACCTCTCTCTGGCGGGAGGCGTGTTGAAGC  900

seq1  CAGCAAAACTAGTTTAGGTATTTGTGTTTTTATGTTTGTAATAATGAGCA  950
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CAGCAAAACTAGTTTAGGTA-TTGTGTTTTTATGTTTGTAATAATGAGCA  949

seq1  CTGAATTCGAGCTTT--CTGTGTGAGATCTGCAGAGCAGAAAGGAAGCAA  998
      |||||||||||||||   |||||||||||||||||||||||    ||| |
seq2  CTGAATTCGAGCTTTTCTTGTGTGAGATCTGCAGAGCAGAA---GAGCCA  996

seq1  GCTAGTGTAGAAGTAAATGTGGAACCCTTCCAACTGTGCTAAGATGGGTT  1048
      |||||||||||||| ||||||  ||| |||  |||||||| |||||| ||
seq2  GCTAGTGTAGAAGT-AATGTG--ACCTTTC--ACTGTGCT-AGATGGTTT  1040

seq1  ATTTGTGT  1056
      ||||||||
seq2  ATTTGTGT  1048