BAC Information

Click to search

BAC

Clone NameB6Ng01-348O21
Chromosome4 (Build37)
Map Location 77,592,982 - 77,594,103
singlet/doubletsinglet
Overlap geneLOC100039974
Upstream genenone
Downstream geneLOC100039996
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-348O21.bB6Ng01-348O21.g
ACCGA130069GA130070
length1,1861,130
definitionB6Ng01-348O21.b B6Ng01-348O21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcccccatagttccacatccttttcttcctacccctcacctctaag
agggagctcccctccctatcaatctcttccctggtgcctcaaatctctag
aggattaaaaacatcttctacactaaggcctatccaggccattctctgct
atgtttgtgccaggggcctcagactggcctgtgtatgctccttgttggtt
actcagtctctgggacctccccagagtctgggtaggttgatactgctggt
cttcctatagggatgtcctaccttcagcttcttcaatccttcccctaatt
caatcataggggttcccgccttcagttgaatggttgggtataagtatctg
cttctgtctcactcagtaggacctctcaggggacagccatgccaggcttc
cctgacacatcataacatcattaatagtgtcaggccttgatgccctccag
ggagaggtatcccaaattgggctggtcactggaccacctttctttcagtc
tcttctctatttttgtccctgcagttcttttaggcaggagctgttctggg
tcacagatattgactgtgggttagtaaccctgtccctctgtttgaggccc
tgtctatctactggaagtgggatatttgagttccctctccccaatgctgg
gcatttaaggtcacccgcactttatattattaatatagcataatattaat
ataacatgttattaaggtcacccccagtaattttatgttattaatagaat
ggtgggctgcaaaatcaaagccatctcatctttagtcccaaattgtgtct
ctaaccccacaaaccaagcactgatgatggagacagtctctaaaatgatt
cccatattgttgttaaggcaaacggtaatgggaccaagataccaacatag
ttcattggaccagtgagaggaaattttctgtttattaaaaaaatctattt
tggctaaacacattttttctacacatcttccccccccccccaaagacagg
aagacacttaaattcagcccaaatttgatctgagcttgcgtctcaaaatc
tttctattctaagacattctgcaaatagaatgtacagtagtaaattttat
ctttatacttcaattaggctttttcaaaaaataaagttagttattaagga
tatgttaccaggtagaccggaattttccataatcaa
gaattcctaaaatcctcttttaatctttaacagaaaaagtattaaatatt
ttatgtatttacatttcaaatgttatccccttcctcccatcctatccctc
cttccctgtccccctgcttctatgaagatgttcctactcccactgcaaca
cccaagcattcccccagagtgaggaaatgagacttcgtaggaccaagggc
ttctcctcctcttgatgccaaacagtaccatcctctgctatatatgtggc
tggagccatgatttcctccatgtgtactcttggctggtggtttagtcccc
cagaagctatggtggtgtttggggtatctggttggttgatattgttgttt
ttcctatggggttgcaaaccccttcagctccttcagtcctttctctaact
cttccattgggatccctgtgctttcttccaatgtttatctgcaagcatcc
gcttctgtataagcaaggttctggcatagcctctcaggagacatccatat
caggctcctgtcagaaagcacttcttggcatcagcaatagtgactgcatt
tggtggctgcatatggaatggatcagttccctaggatgggcagtctctgg
atggcctttccttcagtccttgatgtactcgctgtccctttatttcctcc
cattagtattttgttcccccttctaagaaggaatgaatcattcacatttt
ggtcttccttcttcttgagcttcatacagtctgtgaattgtctttttggg
tatctcaagactttaggataatatctatttttcagtgagtgcataccatg
tgtgtttcttttgtgactgggttacctcgctcaaggatgacattttctag
ttctatccatttgcctaagcatttcatgaagtcattgtttttaatacctg
agtagttactccactgttccacatttgttcaagaaatacttaactgttct
ttattctttatttattttttcttaaaaattttgagactgaaaatgaagga
gaatgcaagaaaccccggtaacctgaaatcccactattttgtactttgct
tgtcatggatggcaatcaattggagactgccctactctggaatcagtatt
tattgagaatgaactttgttcaaggctgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_77592982_77594103
seq2: B6Ng01-348O21.g_67_1196

seq1  GAATTCCTAAAATCCTCTTTTAATCTTTAACAGAAAAAGTATTAAATATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAAAATCCTCTTTTAATCTTTAACAGAAAAAGTATTAAATATT  50

seq1  TTATGTATTTACATTTCAAATGTTATCCCCTTCCTCCCATCCTATCCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTATTTACATTTCAAATGTTATCCCCTTCCTCCCATCCTATCCCTC  100

seq1  CTTCCCTGTCCCCCTGCTTCTATGAAGATGTTCCTACTCCCACTGCAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTGTCCCCCTGCTTCTATGAAGATGTTCCTACTCCCACTGCAACA  150

seq1  CCCAAGCATTCCCCCAGAGTGAGGAAATGAGACTTCGTAGGACCAAGGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGCATTCCCCCAGAGTGAGGAAATGAGACTTCGTAGGACCAAGGGC  200

seq1  TTCTCCTCCTCTTGATGCCAAACAGTACCATCCTCTGCTATATATGTGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTCCTCTTGATGCCAAACAGTACCATCCTCTGCTATATATGTGGC  250

seq1  TGGAGCCATGATTTCCTCCATGTGTACTCTTGGCTGGTGGTTTAGTCCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCCATGATTTCCTCCATGTGTACTCTTGGCTGGTGGTTTAGTCCCC  300

seq1  CAGAAGCTATGGTGGTGTTTGGGGTATCTGGTTGGTTGATATTGTTGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGCTATGGTGGTGTTTGGGGTATCTGGTTGGTTGATATTGTTGTTT  350

seq1  TTCCTATGGGGTTGCAAACCCCTTCAGCTCCTTCAGTCCTTTCTCTAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTATGGGGTTGCAAACCCCTTCAGCTCCTTCAGTCCTTTCTCTAACT  400

seq1  CTTCCATTGGGATCCCTGTGCTTTCTTCCAATGTTTATCTGCAAGCATCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCATTGGGATCCCTGTGCTTTCTTCCAATGTTTATCTGCAAGCATCC  450

seq1  GCTTCTGTATAAGCAAGGTTCTGGCATAGCCTCTCAGGAGACATCCATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTGTATAAGCAAGGTTCTGGCATAGCCTCTCAGGAGACATCCATAT  500

seq1  CAGGCTCCTGTCAGAAAGCACTTCTTGGCATCAGCAATAGTGACTGCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTCCTGTCAGAAAGCACTTCTTGGCATCAGCAATAGTGACTGCATT  550

seq1  TGGTGGCTGCATATGGAATGGATCAGTTCCCTAGGATGGGCAGTCTCTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGCTGCATATGGAATGGATCAGTTCCCTAGGATGGGCAGTCTCTGG  600

seq1  ATGGCCTTTCCTTCAGTCCTTGATGTACTCGCTGTCCCTTTATTTCCTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCTTTCCTTCAGTCCTTGATGTACTCGCTGTCCCTTTATTTCCTCC  650

seq1  CATTAGTATTTTGTTCCCCCTTCTAAGAAGGAATGAATCATTCACATTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGTATTTTGTTCCCCCTTCTAAGAAGGAATGAATCATTCACATTTT  700

seq1  GGTCTTCCTTCTTCTTGAGCTTCATACAGTCTGTGAATTGTCTTTTTGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTCCTTCTTCTTGAGCTTCATACAGTCTGTGAATTGTCTTTTTGGG  750

seq1  TATCTCAAGACTTTAGGATAATATCTATTTTTCAGTGAGTGCATACCATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCAAGACTTTAGGATAATATCTATTTTTCAGTGAGTGCATACCATG  800

seq1  TGTG-TTCTTTTGTGACTGGGTTACCTCGCTC-AGGATGACATTTTCTAG  848
      |||| ||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGTGTTTCTTTTGTGACTGGGTTACCTCGCTCAAGGATGACATTTTCTAG  850

seq1  TTCTATCCATTTGCCTAAGCATTTCATGAAGTCATTGTTTTTAATACCTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATCCATTTGCCTAAGCATTTCATGAAGTCATTGTTTTTAATACCTG  900

seq1  AGTAG-TACTCCACTGTTCCACATTTGTACAAGAAATACTTAAACTGTTC  947
      ||||| |||||||||||||||||||||| |||||||||||| ||||||||
seq2  AGTAGTTACTCCACTGTTCCACATTTGTTCAAGAAATACTT-AACTGTTC  949

seq1  TTTATTCTTTATT--ATTTTTCTTAAAAATTTTGAAGACTGAAAATGAAG  995
      |||||||||||||   |||||||||||||||||| |||||||||||||||
seq2  TTTATTCTTTATTTATTTTTTCTTAAAAATTTTG-AGACTGAAAATGAAG  998

seq1  GAG-ATGCAAGGAAACACAGTAAACTGAGAT-CCACTATTTTGGTAC-TT  1042
      ||| ||||||| || | | |||| |||| || |||||||||| |||| ||
seq2  GAGAATGCAAGAAACCCCGGTAACCTGAAATCCCACTATTTT-GTACTTT  1047

seq1  GCTTGGCATGGGTGGGAAATCAA-TGGAGACCTGCCTAC-CTGG-ATCAG  1089
      ||||| ||||| | || |||||| |||||||   ||||| |||| |||||
seq2  GCTTGTCATGGAT-GGCAATCAATTGGAGACTGCCCTACTCTGGAATCAG  1096

seq1  TATTATATGAAGAATGACC--TGTTCAAGGCTGAA  1122
      |||| |||  ||||||| |  ||||||||||||||
seq2  TATT-TATTGAGAATGAACTTTGTTCAAGGCTGAA  1130