BAC Information

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BAC

Clone NameB6Ng01-349A13
Chromosome4 (Build37)
Map Location 84,483,680 - 84,484,814
singlet/doubletsinglet
Overlap genenone
Upstream gene4930473A06Rik, LOC668010, Bnc2, LOC100040660, LOC624465, LOC100040284
Downstream geneD530005L17Rik, LOC622811, LOC100040303, Sh3gl2, A930009N24
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-349A13.bB6Ng01-349A13.g
ACCGA130143GA130144
length1,2271,125
definitionB6Ng01-349A13.b B6Ng01-349A13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaacaaagagaaatgataagtaaaaaccaatacaaaatcctggag
ataaaaatctccctgtagagtttcaccagtaccatggatcagagacagga
gagagtatctgaaaacatgacagataaactggagcaatcagacaaggaga
atgataaaatataaagagtatctgtggaacatatatggtttattcgaaag
aggccaattttatggacaacaggcaaagaggaagaaaaagcttgttctac
aggcatggaaaatcttttttaaagaatcctaacagaaaatgtctcattta
ggaaaggagatggcaatgtatatacagaggacatttaatattacaaagaa
acaagattaggaaaagaactcagcacagtataattaaaacatctaataga
atacacaaaccatattaaaagcagaaagataaaaaaatcaagtctcatat
aaaggcgggcttgtcagaataacagtatcttattggaataaactttacaa
gacagaaagatctggagaaatatatgtcaggtccttttaggttatttcag
gttatctttcagataacggtcagcccaaagtactatataccaaggaacac
tacctttcataaggaaaatgaaaactttcttttatacattttattacatt
gaaaattaaaagtaatagatttctaggtgtgtatgacttaacaacttaaa
ctgagatgagacaaagatctcccaactaaaaagaaaaaagtccaggccca
caaggattctctagtaaattttatcagaacttcaaagaaaaacaatacca
atatttctcaaaactattccataaaatagaaaaagaaggaatagcaacag
accctttctacaaagctagtctttattctgataccaaaagcagataaaaa
taaaaaaattacagacatatatcccaaaagagcttaaaaataaaaattat
caataaaatactttcacacccaagtatgatttgcttcagaacacatcata
agccattccccctgatcagttgggcttactgtagagagcagaatgtttca
aaatacataaatcataaagtataattacatatattacccaagaacaatag
atagtctctcatcaacatccacctcatgataaagccctggaaaaaacatt
ggaatggaattacaattgaactgtaatgctaaccaactagccaataatat
tgtaattgggaagaaaacacaccttga

gaattcactcaggaatttacaaaagagtttataattttgctgactggctt
cttccatttgcataaaatgtatgtcacaaatatcagctagtatttatttt
tcatttcctagaaactttagaaactctgtaatgttcttggtttttaacaa
acagccgaaacagtcttggaatattaatatgacatcagaaaaatccaacc
atttagattaagacaatatttggttcatatgttctttaagcatcaaagat
aagatgaggagccgtgaagactgacagctttccagtcggggttgattaaa
ttaagctcgttttggtaactaggaaatgaagaaactagaccacatcaaat
aaatagtctcagttaaggacagtgcagcggtgacactggacaaatgtcag
attaagcagatgctgccatcagtccatttgttgtcatgattgtaatgtgg
caactggctccagagacagaggtattctgaaggagagcttcctgggatgg
cactttttgttgactccataaatgagtatgagtcatagtgatgaggggat
actggctgccacacccacaactgtcaaagcagaaaccaggggagaagaaa
ccaccagagttttatttctcttttgaaaaacaacaacacacacaaattcc
ttaaatttccccttaaatttctcaggtcttctctctctctctactctctc
tctctctctctctctctctctcaaagggaattcgacttctacttcaaaca
tatgttacaggcttttaaaatatatttagaattttatttatgacacacat
accttaggtagctcaagagaccaaaattccatcaagtaaagaggtgaaca
ttcattacatgacttctttatttaattatgaaatacaaaagcccattagt
agaatggcctgttgggcctggagagaggatgctggcctgcctgccacggg
tggacctgcagtttctctcctgctctagcttgccaagctggcagctttgg
agagcagatcacctcaaaagaaaggagaaagatgtggaatctgacctctc
gtatcacccacactataaaatacacccgtgcaaccttgcaacaacagcct
atatggtgcctacttatttaatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_84483680_84484814
seq2: B6Ng01-349A13.g_68_1192

seq1  GAATTCACTCAGGAATTTACAAAAGAGTTTATAATTTTGCTGACTGGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCAGGAATTTACAAAAGAGTTTATAATTTTGCTGACTGGCTT  50

seq1  CTTCCATTTGCATAAAATGTATGTCACAAATATCAGCTAGTATTTATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCATTTGCATAAAATGTATGTCACAAATATCAGCTAGTATTTATTTT  100

seq1  TCATTTCCTAGAAACTTTAGAAACTCTGTAATGTTCTTGGTTTTTAACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCCTAGAAACTTTAGAAACTCTGTAATGTTCTTGGTTTTTAACAA  150

seq1  ACAGCCGAAACAGTCTTGGAATATTAATATGACATCAGAAAAATCCAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCGAAACAGTCTTGGAATATTAATATGACATCAGAAAAATCCAACC  200

seq1  ATTTAGATTAAGACAATATTTGGTTCATATGTTCTTTAAGCATCAAAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGATTAAGACAATATTTGGTTCATATGTTCTTTAAGCATCAAAGAT  250

seq1  AAGATGAGGAGCCGTGAAGACTGACAGCTTTCCAGTCGGGGTTGATTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGAGGAGCCGTGAAGACTGACAGCTTTCCAGTCGGGGTTGATTAAA  300

seq1  TTAAGCTCGTTTTGGTAACTAGGAAATGAAGAAACTAGACCACATCAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCTCGTTTTGGTAACTAGGAAATGAAGAAACTAGACCACATCAAAT  350

seq1  AAATAGTCTCAGTTAAGGACAGTGCAGCGGTGACACTGGACAAATGTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGTCTCAGTTAAGGACAGTGCAGCGGTGACACTGGACAAATGTCAG  400

seq1  ATTAAGCAGATGCTGCCATCAGTCCATTTGTTGTCATGATTGTAATGTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGCAGATGCTGCCATCAGTCCATTTGTTGTCATGATTGTAATGTGG  450

seq1  CAACTGGCTCCAGAGACAGAGGTATTCTGAAGGAGAGCTTCCTGGGATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGGCTCCAGAGACAGAGGTATTCTGAAGGAGAGCTTCCTGGGATGG  500

seq1  CACTTTTTGTTGACTCCATAAATGAGTATGAGTCATAGTGATGAGGGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTTTGTTGACTCCATAAATGAGTATGAGTCATAGTGATGAGGGGAT  550

seq1  ACTGGCTGCCACACCCACAACTGTCAAAGCAGAAACCAGGGGAGAAGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCTGCCACACCCACAACTGTCAAAGCAGAAACCAGGGGAGAAGAAA  600

seq1  CCACCAGAGTTTTATTTCTCTTTTGAAAAACAACAACACACACAAATTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCAGAGTTTTATTTCTCTTTTGAAAAACAACAACACACACAAATTCC  650

seq1  TTAAATTTCCCCTTAAATTTCTCAGGTCTTCTCTCTCTCTCTACTCTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTTCCCCTTAAATTTCTCAGGTCTTCTCTCTCTCTCTACTCTCTC  700

seq1  TCTCTCTCTCTCTCTCTCTCTCAAAGGGAATTCGACTTCTACTTCAAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCAAAGGGAATTCGACTTCTACTTCAAACA  750

seq1  TATGTTACAGGCTTTTAAAATATATTTAGAATTTTATTTATGACACACAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTACAGGCTTTTAAAATATATTTAGAATTTTATTTATGACACACAT  800

seq1  ACCTTAGGTAGCTCAAGAGACCAAAATTCCATCAAGTAAAGAGGTGAACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTAGGTAGCTCAAGAGACCAAAATTCCATCAAGTAAAGAGGTGAACA  850

seq1  TTCATTACATGACTTCTTTATTTAATTATGAAATACAAAAGCCCATTAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTACATGACTTCTTTATTTAATTATGAAATACAAAAGCCCATTAGT  900

seq1  AGAATGGCCTGTT-GGCCTGGAGAGAGGATGCTGGCCTGCCTGCCACGGG  949
      ||||||||||||| ||||||||||||||||||||||||||||||||| ||
seq2  AGAATGGCCTGTTGGGCCTGGAGAGAGGATGCTGGCCTGCCTGCCAC-GG  949

seq1  GTGGACCTGCAGGTTTCTCTCCTGCTCTAGCTTGCCAAGCTGGCAGGCTT  999
      ||||||||||| ||||||||||||||||||||||||||||||||||   |
seq2  GTGGACCTGCA-GTTTCTCTCCTGCTCTAGCTTGCCAAGCTGGCAG--CT  996

seq1  TTGGAGAGCAGAATCAACCTCAAAAAGGAAAAGGAGAAAGATGTGGAATT  1049
      ||||||||||| ||| |||||||||    ||||||||||||||||||| |
seq2  TTGGAGAGCAG-ATC-ACCTCAAAA---GAAAGGAGAAAGATGTGGAA-T  1040

seq1  CTGACCTCTTCGTTATCA-CCACACTATAAAATACACCCGTGCAAACCTT  1098
      |||||||| ||| ||||| |||||||||||||||||||||||| ||||||
seq2  CTGACCTC-TCG-TATCACCCACACTATAAAATACACCCGTGC-AACCTT  1087

seq1  GCAAACAACAG-CTATATGGGTGCCTTATT-TTTATTTT-  1135
      || |||||||| |||||| |||||||  || |||| ||| 
seq2  GC-AACAACAGCCTATAT-GGTGCCTACTTATTTAATTTT  1125


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