BAC Information

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BAC

Clone NameB6Ng01-349A17
Chromosome4 (Build37)
Map Location 146,355,409 - 146,356,310
singlet/doubletsinglet
Overlap genenone
Upstream gene1700029I01Rik, LOC236069, LOC384084, LOC666386, LOC666390, LOC100041433, LOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498
Downstream geneLOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-349A17.bB6Ng01-349A17.g
ACCGA130149GA130150
length1,199970
definitionB6Ng01-349A17.b B6Ng01-349A17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagaacttttcagctggggaacgagagtaccagtgagtacagctt
tacgaggtaagtctggtcttgaactttctaaggaaattcaagacagtcta
tcagaagtaaagtggaatatgtttggccttgaattttttctggtgttagg
agcccttttgttccttttcacatgttatcaagtgattaagatagggctga
aaattctagaggaaattcaggacaagctatcagaagtaaagtggggagag
agagtaggaacaaagaggaaatatggtacacaaaataagtatacaggcct
ttccaagggtcttgaacccgaggaaaagttaaggttaggtaggaatacct
ggagagagattagaagaaaaagaggaaaaagggaaaagaagaaagatcaa
ttagcggaggtctctaggaaaaggagcctgtgctcatcgctggatgggct
cggggagccagctcttggtagctctgaagcagatgaagaattctcctctg
aagaaacagactgggaggaagaagcagctcattatgagaaaaaagggtac
cagccaggtaaagtgctagctaatcagttaaggaagccaaaagcggctgg
cgaaggccagtttgctgattggcctcagggcagtcggcttcaaggtccgc
cctatgcggagtccccgccctgcgtagtgcgtcagccctgcgcagagagg
cagtgcgcagagaggcagtgcgcagactcattcattcccagagaggaaca
aaggaaaatacaacaggcatttccggtctttgaaggagccgagggtgggc
gtgtccacgctccggtagaatacttacaaattaaagaaattgccgagtcg
gtccgtaaatacggaaccaatgctaattttaccttggtgcagtttagaca
ggctcgccggcatggcactaactcctgctgactgggcaaacgggttgtaa
aagccgctctccctagtatgggcaaatatatgggaatggagagcgctttg
gcatgaagctgcacaagcgcagcccgagcaaacgcagctgctttgactcc
agagcagagagatttggactttttgacttgtaacgggtcaggagccttat
ttcctgctgatcaacaactataccaattgggagctaaggccagatttctt
ccaccgcctattagggcccctggaagggcgctctttctgagagcacagg
gaattcaaagaaggcagaaacaaacttaatgaaattccagagaattccta
caagtgggtaagagaattatcatacatatgctggatgtgaacatcttatc
cagagatataatttactggtttgaattaaggtcagcctacaaaagaaata
caggcacggcactggaaactcaggccgaaagagtgaatttataactgaca
tctgctatatgtagaaatatggaaatacatttatattgttggtgctttca
gcctaagtcagacaaacatgaattgtagagggaaactgccaattcagaga
gagctgaataaaaagccagcagtggggaaaaggcaacactgtaaaagaag
gaggaagtggagttatggaaacccatgctgtcatttaccatggaacatgg
aattatgaatatatgacagcatggatacccatccaaaaccttcctcagaa
catacatgaaacacaaaggtaggatgaaaacatgaataacaagggatggg
gcagggatagaagagatggtaactatgtaagcacgctgggacacttcatg
tgggaaggccattcacctgaaaacgcaagcactaggagatttagttagca
cagattagagtaaactctaggagctctgcaatatctgcaataccaaagaa
accagataatgcaaatcctctaccagaatgtttctctgtgaatattctaa
taattgtaatatgcatgaaatgagtataatccctaattcatgtgatggaa
aatttactgacaacaggaatttctgtaaaacagaaattggagatgcaggg
aaaaatacattgctgtcataaatttacaatactcaaaacttgatgccctg
ggcatttgtagacagacagcatcaagtgtgtaattaaaaatgggcatagg
ggctggtgagatggctcagtgggtagagcacccgactgctcttctgaagg
tcccgagttcaatcccagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146355409_146356310
seq2: B6Ng01-349A17.g_69_968 (reverse)

seq1  CCTATGCCCATTTTTTAATTACACACTTGATGCTGTCTGTCTACAAATGC  50
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CCTATGCCCA-TTTTTAATTACACACTTGATGCTGTCTGTCTACAAATGC  49

seq1  CCAGGGCATCAAGTTTTGAGTATTATAAATCTATGACAGCAATGTATTTT  100
      |||||||||||||||||||||||| ||||| |||||||||||||||||||
seq2  CCAGGGCATCAAGTTTTGAGTATTGTAAATTTATGACAGCAATGTATTTT  99

seq1  TCCCTGCATCTCCAATTTCTGTTTTACAGAAATTCCTGTTGTCAGTAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGCATCTCCAATTTCTGTTTTACAGAAATTCCTGTTGTCAGTAAAT  149

seq1  TTTCCATCACACTGATTACGGATTATACTCATTTCATGCATATTACAATT  200
      |||||||||||   |||| |||||||||||||||||||||||||||||||
seq2  TTTCCATCACATGAATTAGGGATTATACTCATTTCATGCATATTACAATT  199

seq1  ATTAGAATATTCACAGAGAAACATTCTGGTAGAGGATTTGCATTATCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAATATTCACAGAGAAACATTCTGGTAGAGGATTTGCATTATCTGG  249

seq1  TTTCTTTGGTATTTCAGATATTACAGAGCTCCTAGAGTTTACTCTAATCT  300
      ||||||||||||| |||||||| |||||||||||||||||||||||||||
seq2  TTTCTTTGGTATTGCAGATATTGCAGAGCTCCTAGAGTTTACTCTAATCT  299

seq1  GTGCTAACTAAATCTCCTAGTGCTTGCGTTTTCAGGTGAATGGCCTTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTAACTAAATCTCCTAGTGCTTGCGTTTTCAGGTGAATGGCCTTCCC  349

seq1  ACATGAAGTGTCCCAGAGTGCTTACATAGTTACCATCTCTTCTATCCCTG  400
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ACATGAAGTGTCCCAGCGTGCTTACATAGTTACCATCTCTTCTATCCCTG  399

seq1  CCCCATCCCTTGTTATTCATGTTTTCATCCTATCCTTGTGTTTCATGTAT  450
      |||||||||||||||||||||||||||||||| | |||||||||||||||
seq2  CCCCATCCCTTGTTATTCATGTTTTCATCCTACCTTTGTGTTTCATGTAT  449

seq1  GTTCTGAGGAAGGTTTTGGATGGGTATCCATGCTGTCATATATTCATAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGAGGAAGGTTTTGGATGGGTATCCATGCTGTCATATATTCATAAT  499

seq1  TCCATGTTCCATGGTAAATGACAGCATGGGTTTCCATAACTCCACTTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGTTCCATGGTAAATGACAGCATGGGTTTCCATAACTCCACTTCCT  549

seq1  CCTTCTTTTACAGTGTTGCCTTTTCCCCACTGCTGGCTTTTTATTCAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTTTTACAGTGTTGCCTTTTCCCCACTGCTGGCTTTTTATTCAGCT  599

seq1  CTCTCTGAATTGGCAGTTTCCCTCTACAATTCATGTTTGTCTGACTTAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGAATTGGCAGTTTCCCTCTACAATTCATGTTTGTCTGACTTAGG  649

seq1  CTGAAAGCACCAACAATTTAAATACATTTCCATATTTCTACATATAGCAG  700
      ||||||||||||||||| |||||  |||||||||||||||||||||||||
seq2  CTGAAAGCACCAACAATATAAATGTATTTCCATATTTCTACATATAGCAG  699

seq1  TATGTCAGTTATAAATTCACTCTTTCGGCCTGAGCTTCCAGTGCCGTGTC  750
       ||||||||||||||||||||||||||||||||| ||||||||||||| |
seq2  -ATGTCAGTTATAAATTCACTCTTTCGGCCTGAGTTTCCAGTGCCGTGCC  748

seq1  TGTATTTCTTTTGTAGGCTGACCTTAATTCAAACCAGTAAATTATATCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TGTATTTCTTTTGTAGGCTGACCTTAATTCAAACCAGTAAATTATATCTC  798

seq1  TGGATAAGATGTTTACATCCAGCATATGTATGATAATTCTCTTACCCACT  850
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TGGATAAGATGTTCACATCCAGCATATGTATGATAATTCTCTTACCCACT  848

seq1  TGTAGGAATTCTCTGGAATTTCATTAAGTTTGTTTCTGCCTTCTTTGAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGAATTCTCTGGAATTTCATTAAGTTTGTTTCTGCCTTCTTTGAAT  898

seq1  TC  902
      ||
seq2  TC  900