BAC Information

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BAC

Clone NameB6Ng01-349E14
Chromosome4 (Build37)
Map Location 4,768,409 - 4,769,578
singlet/doubletsinglet
Overlap genenone
Upstream geneMos, Plag1, Chchd7, LOC666586, Rdhe2, 4833413O15Rik, Penk1, A830012C17Rik, LOC100039297, LOC622019, Impad1
Downstream geneLOC100039338, 1700012H17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-349E14.bB6Ng01-349E14.g
ACCGA130321GA130322
length1,1661,192
definitionB6Ng01-349E14.b B6Ng01-349E14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacaactgagaatcagaaaggtaccaagaaggaatgttgttaat
gctttttttttttttgagacagggtttctttgtgatcaatgcttttgttt
taccaaagagatatatgtgtcatttttatagaaatagttgatgtcagaga
agtattctaaattttactccagagcccaagtgccaagatcttcaggagcc
caaaacccttaggaggaaatgacactaattccctcggacaaaatatctag
agaaactttgatccacaaagacatccacctaactcagatccaggttaggt
gcacccaactcctatttttatgaagaacttggtagctccattggaaactt
ggctggggcttttctttctgtagaggggtctatcataggacccagctgaa
acatacataaccaacaaaaggttcctgttattctaacccttagttagacc
aaattcatcggacgtccttctacttgatgcattgtcttaatgataattaa
ggatctttcagaactatggctgggcttgatggtcagggtctcagcgccaa
tgtcctgaattggtagagaacagatattgtagagaaaatgctgtgcaaga
ggtagagggataaattccacagtaatcatgggcacagtatgatttttcct
attttcttagtaaatattctgggtttttgttttaaccaggaaagcaggga
aatattagctgtaggtcagattctagctgatggcatgcttagattttgga
ctgatggaagctagtggtctgtttagacatcccaaaaggattcatgtggt
atccataaagatattaggtcagatacaatggtgcatgatgagtggctatt
aaagataggccaacacaatttggttctggatctccaacattccaattttt
cacactggtgtagcttctagtcagctaatcaaccttccagaatcttgaac
acatatgtgttttcacccctggaaaattacatataactgatgtttatata
tagaaaatgtggaaaggagagaggaggcaggaaatcatagtacaacatgt
tcctatatggtcctgcaaatctctggctacagcctccaaagtactaggat
tatcgcttgtgcaataagtctgatctaggtattttctcctttcatcatag
ttaaagaaacacacgg
gaattctccttaaaaagggacggggtttcgttttctctctctcttgcttc
ttgctctcttgcttcttgctctcttgcttcttgcactctggctcctgaag
atgtaagcaataaagctttgccgcagaagattctggtttgttgcgtcttt
cctggccggtcgtgagaacgcgtctaataacaattggtgccgaattccgg
gacgagaaaaaactcgggactggcgcaaggaagatccctcattccagaac
cagaactgcgggtcgcggtaataaaggttcccgtaaagcagactgttaag
aaggattcaactgtatgaattcagaacttttcagctggggaacgagagta
ccagtgagtacagctttacgaggtaagtctgatcttgaactttctaagga
aattcaagacagtctatcagaagtaaagtggaatatgtttggccttgaat
tttttctagtgttagaagcccttttgttccttttcacatgttatcaagtg
attaagatagggctgaaaattctagaggaaattcaggacaagctatcaga
agtaaagtggggagagagagtaggaacaaagaggaaatatggtacacaaa
ataagtatacaggcctttccaagggtcttgaacccgaggaaaagttaagg
ttaggtaggaatacctggagagagattagaagaaaaagaggaaaaaggga
aaagaagaaagatcaattagcggaggtctctaggaaaaggagcctgtgct
catcgctggatgggctcggggagccagctcttagtagctctgaagcaggt
gaagaatcctcctctgaggaaacagactgggaggaagaagcagctcatta
tgagaaaaaagggtaccagccaggtaaagtgctagctaatcagttaagga
agccaaagcggctggcgaaaggccagtttgctgattggcctcaggcagtc
ggcttcaagtccgccctatgcggagtcccgccctgcgtagtgcgtcagca
atgcgcagagagatgcgcagagagcagtgcgcatagaggcagtgcgcata
ctcatcattccagaagagaacaaggaaaatacacagcattcggtcttgga
aggaccggaggtgggcgtcacgctcggtagaatcctacaatagatgcagt
cggtcgtaaatacggaccaaggctaatttaccttggggtgcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_4768409_4769578
seq2: B6Ng01-349E14.b_48_1213 (reverse)

seq1  CCGTG---TTCTTTAAACTATGATGAAAAGAGAAAATTACTAGATCCAGA  47
      |||||   |||||| ||||||||||||| ||||||||  |||||| ||||
seq2  CCGTGTGTTTCTTT-AACTATGATGAAAGGAGAAAATACCTAGAT-CAGA  48

seq1  CTATTGGCACAAGCCGATAATCCTAGTACTTTGGAGGCTGTAGCCAGAGA  97
      ||  | ||||||| ||||||||||||||||||||||||||||||||||||
seq2  CTTATTGCACAAG-CGATAATCCTAGTACTTTGGAGGCTGTAGCCAGAGA  97

seq1  TTTGCAAGGACCATATAGGAACATG-TGTACTATTGATTTCCTGCCTCCT  146
      ||||| ||||||||||||||||||| ||||||| ||||||||||||||||
seq2  TTTGC-AGGACCATATAGGAACATGTTGTACTA-TGATTTCCTGCCTCCT  145

seq1  CTCTCCTTTCCCACATTTTTCTATATATTAAACATCAGTTATATGTAATT  196
      ||||||||| ||||| ||||||||||| ||||||||||||||||||||||
seq2  CTCTCCTTT-CCACA-TTTTCTATATA-TAAACATCAGTTATATGTAATT  192

seq1  TTCCAGGGGTGAAAACACATATGTGTTCAAGATTCTGGAAGGTTGATTAG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGGGGTGAAAACACATATGTGTTCAAGATTCTGGAAGGTTGATTAG  242

seq1  CTGACTAGAAGCTACACCAGTGTGAAAAATTGGAATGTTGGAGATCCAGA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTAGAAGCTACACCAGTGTGAAAAATTGGAATGTTGGAGATCCAGA  292

seq1  ACCAAATTGTGTTGGCCTATCTTTAATAGCCACTCATCATGCACCATTGT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAATTGTGTTGGCCTATCTTTAATAGCCACTCATCATGCACCATTGT  342

seq1  ATCTGACCTAATATCTTTATGGATACCACATGAATCCTTTTGGGATGTCT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGACCTAATATCTTTATGGATACCACATGAATCCTTTTGGGATGTCT  392

seq1  AAACAGACCACTAGCTTCCATCAGTCCAAAATCTAAGCATGCCATCAGCT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGACCACTAGCTTCCATCAGTCCAAAATCTAAGCATGCCATCAGCT  442

seq1  AGAATCTGACCTACAGCTAATATTTCCCTGCTTTCCTGGTTAAAACAAAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCTGACCTACAGCTAATATTTCCCTGCTTTCCTGGTTAAAACAAAA  492

seq1  ACCCAGAATATTTACTAAGAAAATAGGAAAAATCATACTGTGCCCATGAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGAATATTTACTAAGAAAATAGGAAAAATCATACTGTGCCCATGAT  542

seq1  TACTGTGGAATTTATCCCTCTACCTCTTGCACAGCATTTTCTCTACAATA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTGGAATTTATCCCTCTACCTCTTGCACAGCATTTTCTCTACAATA  592

seq1  TCTGTTCTCTACCAATTCAGGACATTGGCGCTGAGACCCTGACCATCAAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTCTCTACCAATTCAGGACATTGGCGCTGAGACCCTGACCATCAAG  642

seq1  CCCAGCCATAGTTCTGAAAGATCCTTAATTATCATTAAGACAATGCATCA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCCATAGTTCTGAAAGATCCTTAATTATCATTAAGACAATGCATCA  692

seq1  AGTAGAAGGACGTCCGATGAATTTGGTCTAACTAAGGGTTAGAATAACAG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAAGGACGTCCGATGAATTTGGTCTAACTAAGGGTTAGAATAACAG  742

seq1  GAACCTTTTGTTGGTTATGTATGTTTCAGCTGGGTCCTATGATAGACCCC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTTTTGTTGGTTATGTATGTTTCAGCTGGGTCCTATGATAGACCCC  792

seq1  TCTACAGAAAGAAAAGCCCCAGCCAAGTTTCCAATGGAGCTACCAAGTTC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAGAAAGAAAAGCCCCAGCCAAGTTTCCAATGGAGCTACCAAGTTC  842

seq1  TTCATAAAAATAGGAGTTGGGTGCACCTAACCTGGATCTGAGTTAGGTGG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAAAAATAGGAGTTGGGTGCACCTAACCTGGATCTGAGTTAGGTGG  892

seq1  ATGTCTTTGTGGATCAAAGTTTCTCTAGATATTTTGTCCGAGGGAATTAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTTGTGGATCAAAGTTTCTCTAGATATTTTGTCCGAGGGAATTAG  942

seq1  TGTCATTTCCTCCTAAGGGTTTTGGGCTCCTGAAGATCTTGGCACTTGGG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTTCCTCCTAAGGGTTTTGGGCTCCTGAAGATCTTGGCACTTGGG  992

seq1  CTCTGGAGTAAAATTTAGAATACTTCTCTGACATCAACTATTTCTATAAA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGAGTAAAATTTAGAATACTTCTCTGACATCAACTATTTCTATAAA  1042

seq1  AATGACACATATATCTCTTTGGTAAAACAAAAGCATTGATCACAAAGAAA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACACATATATCTCTTTGGTAAAACAAAAGCATTGATCACAAAGAAA  1092

seq1  CCCTGTCTCAAAAAAAAAAAAAGCATTAACAACATTCCTTCTTGGTACCT  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTCTCAAAAAAAAAAAAAGCATTAACAACATTCCTTCTTGGTACCT  1142

seq1  TTCTGATTCTCAGTTGTGGAATTC  1170
      ||||||||||||||||||||||||
seq2  TTCTGATTCTCAGTTGTGGAATTC  1166