BAC Information

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BAC

Clone NameB6Ng01-349M22
Chromosome4 (Build37)
Map Location 25,667,868 - 25,669,017
singlet/doubletsinglet
Overlap geneFut9
Upstream geneKlhl32, 1110007M04Rik, C230012O17Rik, Gpr63, Fhl5, 1810074P20Rik, Prdx6-rs2, LOC665019, LOC625732
Downstream geneLOC100040780, Hn1-ps1, Manea, Bhmt-ps1, LOC665079, Gng2-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-349M22.bB6Ng01-349M22.g
ACCGA130686GA130687
length1,1451,174
definitionB6Ng01-349M22.b B6Ng01-349M22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacaattatggttgtggagtgtttcctgtgacagctgtggaaac
ttaggaacactcatagagaaggtatcataaggcacaaaatagtggcgtga
tgaatacactctagattttgatgttcctgtgaacttttttgccctcattt
aagtaattgattttgtacttatgaagacaataccgagagctggagaggtt
ggctcagtggttaagagaattggctgcttttctagaggacctgagttcaa
ttcccagcacacacatagcagctcacagctatgtggagctcaggttccat
ggaatctgataccttcatgcaagcaaaatgccaatgaacataatgtatga
ataagtgaatagataaatcataaaagaagacaatactcaatgcgatcatc
tcaataattccatcttctgaaggagaaaattcatctctttcttacttctc
tccccacatagtgcactgcttaatggatttgttgttgttgttgttaaatt
ttaacaagtatggttaaagccccttaaaataggtggatattcgtctcatt
caatgaggcaaaactgtaattaatatccacaaagtagagtagatcaattc
agcagccacttccaatccctcaggtacttggccgttgccaacaaaactat
caagtggatctgctgtcctcgtcatttgtaaagacgccttcacaatctca
ttaaaacttgttcacttggaatccaaatccaaaaagtcttcttatattcc
ctgaaatcttgacatcattttagaaaatcaaatttggattggcaacgtac
aaacatgcaagcagtctttttttttagttttagctcttaaagaaagaaaa
tggagatcctgtggttctatttctgaatttcatgggctgttatccaccga
gaaattgagtgccctgagacccagcctccctcagaccacttgcacattac
ttatagtaaatagataggcgggtgagaggctgtgagcagcacagctggtg
aagccagttctttagtgtgcattgaggaggaagaaaaaaaagatgcttag
cagccaccgctcctttgagctataaatactggtaatcttactgtacacat
gagaggagagaagcgagttatctctatgtatcttagctcatggga
gaattcttcttggtagactttcctttgaccagtaggaagtatgcttcctt
atcttttttgataagttttggttgaaagtcaattttattcaatattagaa
tgactactccagcttatttcttcggaccatttgttgaaaattgtttccaa
ccttgtattctgagatagtgtctgtctttgtcactgaggtgggtttcctg
tatacagcaaaatgccgtgtcctgtttatgtatccagtctgttaatctat
gtttttattggggaattgagtccattgatgttaatagacattaaggaaaa
gtaactatagcttcctgttatttttgttgctagaggtgaaattatgcttg
tgtggctttcttcttttgggtttattgaaagattactttcttgctttttc
tagggcataatttccctccttcttggtgttttccatttattaacctttgt
aaggctgcatttatggaaatatattgtgtaaatttgtttttgtcatggaa
tatcttgttttctctatctatagtttaattactatagataatttttagag
ttttgctgggtatagtagcctgagtaggcatttgtgttctcttagggtct
gtatgacatctgcccaggatcttctacttttcatagtctctagtgagaaa
tctggtgttattctaataggtctgcctttatatgttacttgaccattttc
ccttactgctttaaatattctttctttatttagtgcatttggtgttttga
ttattatgtgacaagaggaatttctttctggtccagtctatttgtagttc
tgtaggcttcttgtatgttcatgggcatctctttctttcttttttttttt
tttttttaatatttttattacatattttccctcaattacatttccaatgc
tatcccaaaagtcccccataccctcccccccccacttcctacccacccat
ttcccattttttttgggcctggcattccctgtactggggcatatacagtt
tggcgtgttcaatagggcctctcattcagtgatggccgactaggcattct
ttttgaattacatatgcagctagagtcaagagctcaagggtactgttagt
tcaataatgttgttccactaagtgcgaatctctagctcatggtatctcct
ctagatctcgcttccatattgagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_25667868_25669017
seq2: B6Ng01-349M22.b_48_1192

seq1  GAATTCAACAATTATGGTTGTGGAGTGTTTCCTGTGACAGCTGTGGAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACAATTATGGTTGTGGAGTGTTTCCTGTGACAGCTGTGGAAAC  50

seq1  TTAGGAACACTCATAGAGAAGGTATCATAAGGCACAAAATAGTGGCGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAACACTCATAGAGAAGGTATCATAAGGCACAAAATAGTGGCGTGA  100

seq1  TGAATACACTCTAGATTTTGATGTTCCTGTGAACTTTTTTGCCCTCATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATACACTCTAGATTTTGATGTTCCTGTGAACTTTTTTGCCCTCATTT  150

seq1  AAGTAATTGATTTTGTACTTATGAAGACAATACCGAGAGCTGGAGAGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAATTGATTTTGTACTTATGAAGACAATACCGAGAGCTGGAGAGGTT  200

seq1  GGCTCAGTGGTTAAGAGAATTGGCTGCTTTTCTAGAGGACCTGAGTTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCAGTGGTTAAGAGAATTGGCTGCTTTTCTAGAGGACCTGAGTTCAA  250

seq1  TTCCCAGCACACACATAGCAGCTCACAGCTATGTGGAGCTCAGGTTCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAGCACACACATAGCAGCTCACAGCTATGTGGAGCTCAGGTTCCAT  300

seq1  GGAATCTGATACCTTCATGCAAGCAAAATGCCAATGAACATAATGTATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCTGATACCTTCATGCAAGCAAAATGCCAATGAACATAATGTATGA  350

seq1  ATAAGTGAATAGATAAATCATAAAAGAAGACAATACTCAATGCGATCATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTGAATAGATAAATCATAAAAGAAGACAATACTCAATGCGATCATC  400

seq1  TCAATAATTCCATCTTCTGAAGGAGAAAATTCATCTCTTTCTTACTTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAATTCCATCTTCTGAAGGAGAAAATTCATCTCTTTCTTACTTCTC  450

seq1  TCCCCACATAGTGCACTGCTTAATGGATTTGTTGTTGTTGTTGTTAAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCACATAGTGCACTGCTTAATGGATTTGTTGTTGTTGTTGTTAAATT  500

seq1  TTAACAAGTATGGTTAAAGCCCCTTAAAATAGGTGGATATTCGTCTCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAAGTATGGTTAAAGCCCCTTAAAATAGGTGGATATTCGTCTCATT  550

seq1  CAATGAGGCAAAACTGTAATTAATATCCACAAAGTAGAGTAGATCAATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAGGCAAAACTGTAATTAATATCCACAAAGTAGAGTAGATCAATTC  600

seq1  AGCAGCCACTTCCAATCCCTCAGGTACTTGGCCGTTGCCAACAAAACTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCCACTTCCAATCCCTCAGGTACTTGGCCGTTGCCAACAAAACTAT  650

seq1  CAAGTGGATCTGCTGTCCTCGTCATTTGTAAAGACGCCTTCACAATCTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGGATCTGCTGTCCTCGTCATTTGTAAAGACGCCTTCACAATCTCA  700

seq1  TTAAAACTTGTTCACTTGGAATCCAAATCCAAAAAGTCTTCTTATATTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACTTGTTCACTTGGAATCCAAATCCAAAAAGTCTTCTTATATTCC  750

seq1  CTGAAATCTTGACATCATTTTAGAAAATCAAATTTGGATTGGCAACGTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAATCTTGACATCATTTTAGAAAATCAAATTTGGATTGGCAACGTAC  800

seq1  AAACATGCAAGCAGTCTTTTTTTTTAGTTTTAGCTCTTAAAGAAAGAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGCAAGCAGTCTTTTTTTTTAGTTTTAGCTCTTAAAGAAAGAAAA  850

seq1  TGGAGATCCTGTGGTTCTATTTCTGAATTTCATGGGCTGTTATCCACCGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGATCCTGTGGTTCTATTTCTGAATTTCATGGGCTGTTATCCACCGA  900

seq1  GAAATTGAGTGCCCTGAGACCCAGCCTCCCTCAGACCACTTGCACATTAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTGAGTGCCCTGAGACCCAGCCTCCCTCAGACCACTTGCACATTAC  950

seq1  TTATAGTAAATAGATAGGCGGGTGAGAGGCTGTGAGCAGCACAGCTGGTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGTAAATAGATAGGCGGGTGAGAGGCTGTGAGCAGCACAGCTGGTG  1000

seq1  -AGCCAGTTCTTTAGTGGTGCATTGAAGAGGAAG-AAAAAAAGATGCTTT  1048
       ||||||||||||||| ||||||||| ||||||| |||||||||||| ||
seq2  AAGCCAGTTCTTTAGT-GTGCATTGAGGAGGAAGAAAAAAAAGATGC-TT  1048

seq1  AGCAGC--ACGCT-CTTTGAGGCTATAAATACTTGGTAAACCTACTGTAA  1095
      ||||||   |||| |||||| ||||||||||| |||||| | |||||| |
seq2  AGCAGCCACCGCTCCTTTGA-GCTATAAATAC-TGGTAATCTTACTGT-A  1095

seq1  CACATGAAGGAGGAGAGAAGCGATGTTATCCTCTTATGTATCTTAGCTCA  1145
      |||||||  |||||||||||||| ||||| ||| ||||||||||||||||
seq2  CACATGA--GAGGAGAGAAGCGA-GTTAT-CTC-TATGTATCTTAGCTCA  1140

seq1  TGGGA  1150
      |||||
seq2  TGGGA  1145