BAC Information

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BAC

Clone NameB6Ng01-350G15
Chromosome4 (Build37)
Map Location 128,092,264 - 128,207,855
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC635169, 4930465A12Rik, Hmgb4, 4930546G22Rik
Downstream geneZscan20, Tlr12, Phc2, A3galt2, BC039093, LOC667354, Trim62, Adc, Ak2, Ibrdc3, Tmem54, Hpca, Fndc5, S100pbp, Yars, C77080, Sync, Rbbp4, Zbtb8os, 2410081M15Rik, LOC100039588, Zbtb8, Bsdc1, Tssk3, 1700125D06Rik, Marcksl1, Hdac1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-350G15.bB6Ng01-350G15.g
ACCGA131090GA131091
length1,1731,057
definitionB6Ng01-350G15.b B6Ng01-350G15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,206,661 - 128,207,855)(128,092,264 - 128,093,324)
sequence
gaattcagaagtctagacagacgcttctcagtccagcccagactctaggg
caaagcttgatgacaaagtagaccctgcacgggaggctggcctggtccta
aggccacggcccctcttctctgccttggtcacctggtcatggatttatct
tccatgtccaggtgactgtcacctctcctaaggagcctgcccctcctcct
agaccactcagtctttctctctcagtgttcccagtgtggctgctggccta
aggtgagttgtctccatccatatacaccctgagagcatggctctcttgcc
tctgtgtatctgacccctagtgtggctccttcccaaagctcatctgttgt
aagacagacacatctaacctggtttgaatagcacttgacctcgttctgaa
actggtttagttctttttatgactgtttcaagtaagcattcgtctcctgg
gggactcagctggccttccaatgagcaagggtttccaaagatgcttcact
catattcggcgtgtttagaataatggcaatattcaccataacccgtacta
tgtgctttgcctttcaaatactttcagatgcaccttatgacctgagtctc
atcctcatagagtaagacagtcaggaaaagcgagtcaggagaagtgaagt
gatatagatattcactttattatacaaggtgtgtgtgtgtgtatgtttgt
gcacatatatgtttctatgtgcatgtggacacaggataactttgcatgac
ttcttcaggaacttttcccagttcctctgagatagggcctctcactggct
ggagctcagcgattaggcgaggcaagcccctaggaactaactgcctgtct
ctgccttcctagtgctgagactacaagcatgctaccacacctggcttttt
aaaaaataataattaaattaactttattacttattcattttacatcctgc
tcactgcccgtcttccagtcaccctccacaacccttccccacctccctcc
cttctttccctgggtattcctaccctggtacttcaagtgcaggctaggtg
cttctctccagctacacagcacagcttttggaatagccctgctcagttgt
taaggaacccacatgagacctaaattatctatctacagaatgcaggtgga
tgatccaggacttgggaatggcc
gaattctacagccctactcatcctgtttcccccaaaccagatctcaccag
tcaggcctcttgtgcccaacacccacaatgcacttgtgcaacacaggtgg
atgtgatgagtaggaaggagacactgggagaaaccatgaatgcctaccaa
accacacgtgctagaaagaggcaagcaagtgtctgtctgggtatgtggaa
gcagagaaataagagggtgaaaaagaaagtccatagggacagacttgatc
tggaaaacccatgatctaccaaagatagcaggggcacagatggatggctg
ttaggaagagtcccagccacagagctctgatctaagtcttttaacagaga
gctgtgcactgggattaatggttccactaagccttgggagggtagataag
atctcaccattgggagggttaggtgagtaggcagatggtctagctggagc
ccatacggggccagttggataaacagcatggtgagaaaccttggtgacca
tggctggtcctgttcccctggataactacattgtcattgggtccccacat
gacacacagaaggtcaggacaaagaatttcaacccagaaagtagacagtg
gcagcccataaacagacctttggtcttcctgtgttactgaggttgaaata
ggtggtaggcttatctctgcccttttctttcattcatgtgtgtgtgtgtg
tgtgtgtgtgcgcgcgcgtgcgtgcgtgcgtgcgtgtgtgtgtgtgtgtg
catgtgcacacgtagataggcatgcatgtgtgtgtatgaaaccagaggtc
agcctcggtgtctttccttaggagtcatctacttgggattttgggggtat
ttgttttgttcaggcagggtctctcacttgaaaagaccaggggttgggcc
aattgagcttagcttgctggcccaaagaccctcctgtccccattgctgaa
actggcttacagcactaggattttaccgtctgtgactattcctctcttta
tttcatctttcttcatgttcaagccctacataagtgctaagattcagtga
cagcact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_128206661_128207855
seq2: B6Ng01-350G15.b_48_1220 (reverse)

seq1  GGCCATTCCCCCAGTCTCTGATCCATCCCCAACCCCTGCATTTCTTGTAG  50
      ||||||| ||| |||| |||   ||||     | ||||||||   |||||
seq2  GGCCATT-CCCAAGTC-CTGGATCATC-----CACCTGCATT--CTGTAG  41

seq1  ATAGGATAAATTTTGGGTCTTCATGTGGG-TCCCTAACAACTGGAGCAGG  99
      ||| |||||  ||| |||| ||||||||| ||| |||||||| ||||| |
seq2  ATA-GATAA--TTTAGGTC-TCATGTGGGTTCCTTAACAACT-GAGCA-G  85

seq1  GGCTATCCCAAAAGCTGTTGCCTGTGTAGCCGGGAGAGAAAGCACCTAGC  149
      |||||| |||||||||||   |||||||| | |||||| |||||||||||
seq2  GGCTATTCCAAAAGCTGT--GCTGTGTAG-CTGGAGAG-AAGCACCTAGC  131

seq1  CTGGCACTTGAAGTACCAGGGTAGGGAAATACCCAGGGAAGAAGGGGAGG  199
      || ||||||||||||||||||||||  |||||||||||||  | |||| |
seq2  CT-GCACTTGAAGTACCAGGGTAGG--AATACCCAGGGAAAGAAGGGA-G  177

seq1  GGAGGTGGGGGAAGGGTTGTGGAGGGTGACTGGAAGACGGGCAGTGAGCA  249
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGT-GGGGAAGGGTTGTGGAGGGTGACTGGAAGACGGGCAGTGAGCA  226

seq1  GGATGTAAAATGAATAAGTAATAAAGTTAA-TTAATTATTATTTTTTAAA  298
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GGATGTAAAATGAATAAGTAATAAAGTTAATTTAATTATTATTTTTTAAA  276

seq1  AAGCCAGGTGTGGTAGCATGCTTGTAGTCTCAGCACTAGGAAGGCAGAGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAGGTGTGGTAGCATGCTTGTAGTCTCAGCACTAGGAAGGCAGAGA  326

seq1  CAGGCAGTTAGTTCCTAGGGGCTTGCCTCGCCTAATCGCTGAGCTCCAGC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAGTTAGTTCCTAGGGGCTTGCCTCGCCTAATCGCTGAGCTCCAGC  376

seq1  CAGTGAGAGGCCCTATCTCAGAGGAACTGGGAAAAGTTCCTGAAGAAGTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAGAGGCCCTATCTCAGAGGAACTGGGAAAAGTTCCTGAAGAAGTC  426

seq1  ATGCAAAGTTATCCTGTGTCCACATGCACATAGAAACATATATGTGCACA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAAGTTATCCTGTGTCCACATGCACATAGAAACATATATGTGCACA  476

seq1  AACATACACACACACACACCTTGTATAATAAAGTGAATATCTATATCACT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATACACACACACACACCTTGTATAATAAAGTGAATATCTATATCACT  526

seq1  TCACTTCTCCTGACTCGCTTTTCCTGACTGTCTTACTCTATGAGGATGAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTCTCCTGACTCGCTTTTCCTGACTGTCTTACTCTATGAGGATGAG  576

seq1  ACTCAGGTCATAAGGTGCATCTGAAAGTATTTGAAAGGCAAAGCACATAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGTCATAAGGTGCATCTGAAAGTATTTGAAAGGCAAAGCACATAG  626

seq1  TACGGGTTATGGTGAATATTGCCATTATTCTAAACACGCCGAATATGAGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGGGTTATGGTGAATATTGCCATTATTCTAAACACGCCGAATATGAGT  676

seq1  GAAGCATCTTTGGAAACCCTTGCTCATTGGAAGGCCAGCTGAGTCCCCCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCATCTTTGGAAACCCTTGCTCATTGGAAGGCCAGCTGAGTCCCCCA  726

seq1  GGAGACGAATGCTTACTTGAAACAGTCATAAAAAGAACTAAACCAGTTTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACGAATGCTTACTTGAAACAGTCATAAAAAGAACTAAACCAGTTTC  776

seq1  AGAACGAGGTCAAGTGCTATTCAAACCAGGTTAGATGTGTCTGTCTTACA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACGAGGTCAAGTGCTATTCAAACCAGGTTAGATGTGTCTGTCTTACA  826

seq1  ACAGATGAGCTTTGGGAAGGAGCCACACTAGGGGTCAGATACACAGAGGC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATGAGCTTTGGGAAGGAGCCACACTAGGGGTCAGATACACAGAGGC  876

seq1  AAGAGAGCCATGCTCTCAGGGTGTATATGGATGGAGACAACTCACCTTAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGCCATGCTCTCAGGGTGTATATGGATGGAGACAACTCACCTTAG  926

seq1  GCCAGCAGCCACACTGGGAACACTGAGAGAGAAAGACTGAGTGGTCTAGG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCAGCCACACTGGGAACACTGAGAGAGAAAGACTGAGTGGTCTAGG  976

seq1  AGGAGGGGCAGGCTCCTTAGGAGAGGTGACAGTCACCTGGACATGGAAGA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGGGCAGGCTCCTTAGGAGAGGTGACAGTCACCTGGACATGGAAGA  1026

seq1  TAAATCCATGACCAGGTGACCAAGGCAGAGAAGAGGGGCCGTGGCCTTAG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCCATGACCAGGTGACCAAGGCAGAGAAGAGGGGCCGTGGCCTTAG  1076

seq1  GACCAGGCCAGCCTCCCGTGCAGGGTCTACTTTGTCATCAAGCTTTGCCC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGGCCAGCCTCCCGTGCAGGGTCTACTTTGTCATCAAGCTTTGCCC  1126

seq1  TAGAGTCTGGGCTGGACTGAGAAGCGTCTGTCTAGACTTCTGAATTC  1195
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTCTGGGCTGGACTGAGAAGCGTCTGTCTAGACTTCTGAATTC  1173

seq1: chr4_128092264_128093324
seq2: B6Ng01-350G15.g_66_1122

seq1  GAATTCTACAGCCCTACTCATCCTGTTTCCCCCAAACCAGATCTCACCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACAGCCCTACTCATCCTGTTTCCCCCAAACCAGATCTCACCAG  50

seq1  TCAGGCCTCTTGTGCCCAACACCCACAATGCACTTGTGCAACACAGGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCCTCTTGTGCCCAACACCCACAATGCACTTGTGCAACACAGGTGG  100

seq1  ATGTGATGAGTAGGAAGGAGACACTGGGAGAAACCATGAATGCCTACCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGATGAGTAGGAAGGAGACACTGGGAGAAACCATGAATGCCTACCAA  150

seq1  ACCACACGTGCTAGAAAGAGGCAAGCAAGTGTCTGTCTGGGTATGTGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACACGTGCTAGAAAGAGGCAAGCAAGTGTCTGTCTGGGTATGTGGAA  200

seq1  GCAGAGAAATAAGAGGGTGAAAAAGAAAGTCCATAGGGACAGACTTGATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGAAATAAGAGGGTGAAAAAGAAAGTCCATAGGGACAGACTTGATC  250

seq1  TGGAAAACCCATGATCTACCAAAGATAGCAGGGGCACAGATGGATGGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAACCCATGATCTACCAAAGATAGCAGGGGCACAGATGGATGGCTG  300

seq1  TTAGGAAGAGTCCCAGCCACAGAGCTCTGATCTAAGTCTTTTAACAGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAAGAGTCCCAGCCACAGAGCTCTGATCTAAGTCTTTTAACAGAGA  350

seq1  GCTGTGCACTGGGATTAATGGTTCCACTAAGCCTTGGGAGGGTAGATAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGCACTGGGATTAATGGTTCCACTAAGCCTTGGGAGGGTAGATAAG  400

seq1  ATCTCACCATTGGGAGGGTTAGGTGAGTAGGCAGATGGTCTAGCTGGAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCACCATTGGGAGGGTTAGGTGAGTAGGCAGATGGTCTAGCTGGAGC  450

seq1  CCATACGGGGCCAGTTGGATAAACAGCATGGTGAGAAACCTTGGTGACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATACGGGGCCAGTTGGATAAACAGCATGGTGAGAAACCTTGGTGACCA  500

seq1  TGGCTGGTCCTGTTCCCCTGGATAACTACATTGTCATTGGGTCCCCACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGGTCCTGTTCCCCTGGATAACTACATTGTCATTGGGTCCCCACAT  550

seq1  GACACACAGAAGGTCAGGACAAAGAATTTCAACCCAGAAAGTAGACAGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACACAGAAGGTCAGGACAAAGAATTTCAACCCAGAAAGTAGACAGTG  600

seq1  GCAGCCCATAAACAGACCTTTGGTCTTCCTGTGTTACTGAGGTTGAAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCCATAAACAGACCTTTGGTCTTCCTGTGTTACTGAGGTTGAAATA  650

seq1  GGTGGTAGGCTTATCTCTGCCCTTTTCTTTCATTCATGTGTGTGTGTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTAGGCTTATCTCTGCCCTTTTCTTTCATTCATGTGTGTGTGTGTG  700

seq1  TGTGTGTGTGCGCGCGCGTGCGTGCGTGCGTGCGTGTGTGTGTGTGTGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGCGCGCGCGTGCGTGCGTGCGTGCGTGTGTGTGTGTGTGTG  750

seq1  CATGTGCACACGTAGATAGGCATGCATGTGTGTGTATGAAACCAGAGGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGCACACGTAGATAGGCATGCATGTGTGTGTATGAAACCAGAGGTC  800

seq1  AGCCTCGGTGTCTTTCCTTAGGAGTCATCTACTT-GGATTTTGGGGGTAT  849
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AGCCTCGGTGTCTTTCCTTAGGAGTCATCTACTTGGGATTTTGGGGGTAT  850

seq1  TTGTTTTGTTCAGGCAGGGTCTCTCACTGGAAAAGACCAGGGGTT-GGCC  898
      |||||||||||||||||||||||||||| |||||||||||||||| ||||
seq2  TTGTTTTGTTCAGGCAGGGTCTCTCACTTGAAAAGACCAGGGGTTGGGCC  900

seq1  AATTGAGCTTAGCTTGCTGGCCCCAAAGACCCTCCTGTCCCCATTGCTGA  948
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AATTGAGCTTAGCTTGCTGG-CCCAAAGACCCTCCTGTCCCCATTGCTGA  949

seq1  CACTGGCATTACAGCACTAGGATTTTACCGTCTGTGACTATTCCTCTCTT  998
       |||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGC-TTACAGCACTAGGATTTTACCGTCTGTGACTATTCCTCTCTT  998

seq1  TATTTCCATCTTTCTTCATGTTCAAGGCCCTACATAGGTGCTTAGAATTC  1048
      ||||| ||||||||||||||||||| |||||||||| ||||| || ||||
seq2  TATTT-CATCTTTCTTCATGTTCAA-GCCCTACATAAGTGCTAAG-ATTC  1045

seq1  AGTGACGAGCACT  1061
      |||||| ||||||
seq2  AGTGAC-AGCACT  1057