BAC Information

Click to search

BAC

Clone NameB6Ng01-350H24
Chromosome4 (Build37)
Map Location 29,944,116 - 29,944,730
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040907, LOC100040811
Downstream geneLOC665185, LOC619906, LOC100040864
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-350H24.bB6Ng01-350H24.g
ACCGA131150GA131151
length1,194617
definitionB6Ng01-350H24.b B6Ng01-350H24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgaaattcttagataaattaatggatctggagaatataatcct
aagtgaggtaacccaatcagaaaagaacacacatgatatgtactcactga
taagtggctattagcctagaagcccagaataccaaaagtaatttgaaaaa
cacatgaaactcaagaagaagaaaaccaaagtatgtatacttcaatcctt
cttagcagggatacaaagtgcccatggaaggaattatagagacaaagtat
ggagcagagattgaaggaataaccatccagagactgtcccacctgaggat
ccatcccataaacaaccaccaaacccagatactattgcagataccaacaa
gatttatctaacaggagcctcaatgaaggagctagagaaagtagcctggc
ttggctatgagaatataagtaatttttcaaccctgtgagaaatccaagaa
tgaccaacattaactgaaaatatataagaagcctaaaacagcttctagaa
ctgagacaaattgtagaagcagctgtatacatatacagcttaaataagtc
aggaagatggagaatgtcttcagccttctgtcccaggatcatctgataga
tctagagaaacagaatattaaggactagcctattctgtctcagcagaatc
aagctgtcctaaacctgtaattatgtctttcttttgacagtattatgtct
gtagataataagaggcgattcttgcttagtggctgtcttaacactgctca
atgtcttctttgaatccaagacagggaaagctgtcaggagcagactagtc
tcaacaacaagtgaataaatagcatcaaacatcacattctgtgtgcctct
gacatttttgaaaacgagctatctatataaagtaatctggactgttctcc
atttactattctcagatatttctaattaaaatctctgaaaacactctaac
aataatctcagagccatggatttgctatatggcccttaactaacaggctt
aatcatttcagatcagtttataataacaggttatagaaggactgggtcta
gcctgtacatttacattttttgtatcatagaagaagttggtaccatgaac
accttgattttgcatgaaataaattctgtaccaactaggacctacacttc
attaacttaacaagttaaaggatttctcaccaaagtgtggagga
gaattcctctggtacttaatccactttgactttaagatggtcaccagtgc
agcagtctctgcataaaatgatcttcttttcatttaggctattaacaaaa
tcagcacctatggttgtacgactgaatctcctgttttctgttatttcact
gctttcaatgagagtctgtatcagtccctagattctatatctgttctgaa
ctgtgaggtgttgaccatagaatccattgttcctttcttgaaggaagtgc
tttctatttatattcatgagtactcagtaagctcagaacaccagtcttta
aaaggaccagaaggacaaactcgtttcattaattcagattcagtgattgc
tagcttaatacaagtgcaccagtgtgtttgttgataattactacagttaa
aaggaatacacagttacctcactttatatgccccagtataggggaatgcc
agagtcaagaagtgggagtgggtgggtaggggagcagttttgggtgaggg
tatagggaacttttgggatagcatttgaaatgtgtataaagaaaatatct
aataaaaaataaaattaaaaaaaaatatgagtacacagtgagccatagcc
ttttgaggtcataacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_29944116_29944730
seq2: B6Ng01-350H24.g_66_682 (reverse)

seq1  TTGTTATGACCTC-AAAGGCTCTGGCTC-CTGTGTACTCCTATTTTTTTT  48
      ||||||||||||| ||||||| |||||| |||||||||| ||||||||||
seq2  TTGTTATGACCTCAAAAGGCTATGGCTCACTGTGTACTCATATTTTTTTT  50

seq1  TAATTTTATTTTTTATTAGATATTTTCTTTATACACATTTCAAATGCTAT  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTATTTTTTATTAGATATTTTCTTTATACACATTTCAAATGCTAT  100

seq1  CCCAAAAGTTCCCTATACCCTCACCCTAACCTGCTCCCCTACCCACCCAC  148
      |||||||||||||||||||||||||| || ||||||||||||||||||||
seq2  CCCAAAAGTTCCCTATACCCTCACCCAAAACTGCTCCCCTACCCACCCAC  150

seq1  TCCCACTTCTTGACTCTGGCATTCCCCTATACTGGGGCATATAAAGTGAG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACTTCTTGACTCTGGCATTCCCCTATACTGGGGCATATAAAGTGAG  200

seq1  GTAACTGTGTATTCCTTTTAACTGTAGTAATTATCAACAAACACACTGGT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTGTGTATTCCTTTTAACTGTAGTAATTATCAACAAACACACTGGT  250

seq1  GCACTTGTATTAAGCTAGCAATCACTGAATCTGAATTAATGAAACGAGTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTGTATTAAGCTAGCAATCACTGAATCTGAATTAATGAAACGAGTT  300

seq1  TGTCCTTCTGGTCCTTTTAAAGACTGGTGTTCTGAGCTTACTGAGTACTC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTCTGGTCCTTTTAAAGACTGGTGTTCTGAGCTTACTGAGTACTC  350

seq1  ATGAATATAAATAGAAAGCACTTCCTTCAAGAAAGGAACAATGGATTCTA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATATAAATAGAAAGCACTTCCTTCAAGAAAGGAACAATGGATTCTA  400

seq1  TGGTCAACACCTCACAGTTCAGAACAGATATAGAATCTAGGGACTGATAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCAACACCTCACAGTTCAGAACAGATATAGAATCTAGGGACTGATAC  450

seq1  AGACTCTCATTGAAAGCAGTGAAATAACAGAAAACAGGAGATTCAGTCGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCTCATTGAAAGCAGTGAAATAACAGAAAACAGGAGATTCAGTCGT  500

seq1  ACAACCATAGGTGCTGATTTTGTTAATAGCCTAAATGAAAAGAAGATCAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCATAGGTGCTGATTTTGTTAATAGCCTAAATGAAAAGAAGATCAT  550

seq1  TTTATGCAGAGACTGCTGCACTGGTGACCATCTTAAAGTCAAAGTGGATT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGCAGAGACTGCTGCACTGGTGACCATCTTAAAGTCAAAGTGGATT  600

seq1  AAGTACCAGAGGAATTC  615
      |||||||||||||||||
seq2  AAGTACCAGAGGAATTC  617